Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20parabailii_20[genbank_20GCA_5F001984395.2_202017 -03-16] 18 sequences; 20,864,403 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq9 100 6e-16 seq14 96.9 7e-15 seq10 89.7 1e-12 >seq9 Length=2005801 Score = 100 bits (110), Expect = 6e-16 Identities = 106/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 93571 TTCACCACTTGGAATGATCCTGAAAGTACATTACGATTATACATGTTGGACGTTAAAGGC 93630 ||||| | ||| ||| || ||||| ||| |||| |||||| |||||||| ||||| Sbjct 288994 TTCACAATTTGAAATTCACCAGAAAGCACACGACGAGAATACATATTGGACGTGTAAGGC 289053 Query 93631 TCAAAGGATTCAGAGTTGCCCAGGATCTGTGCAGTGGATGCAGTAGGCATGGGAGCAACA 93690 || ||| ||||| || ||||| |||||| | ||| || ||||||||||| || |||||| Sbjct 289054 TCGAAGCATTCATTGTAGCCCAAGATCTGGGAAGTAGAAGCAGTAGGCATAGGGGCAACA 289113 Query 93691 AACATTGAATTGTGAACACC 93710 | || || || | ||||| Sbjct 289114 AGCAAGGAGTTACGCACACC 289133 >seq14 Length=1283838 Score = 96.9 bits (106), Expect = 7e-15 Identities = 106/141 (75%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 93570 GTTCACCACTTGGAATGATCCTGAAAGTACATTACGATTATACATGTTGGACGTTAAAGG 93629 |||||| | ||| ||| || ||||| ||| |||| |||||| |||||||| | || Sbjct 991983 GTTCACAATTTGAAATTCACCAGAAAGCACACGACGAGAATACATATTGGACGTGTACGG 991924 Query 93630 CTCAAAGGATTCAGAGTTGCCCAGGATCTGTGCAGTGGATGCAGTAGGCATGGGAGCAAC 93689 ||| ||| ||||| || ||||| |||||| | ||| || ||||||||||| || ||||| Sbjct 991923 CTCGAAGCATTCATTGTAGCCCAAGATCTGGGAAGTAGAAGCAGTAGGCATAGGGGCAAC 991864 Query 93690 AAACATTGAATTGTGAACACC 93710 || || || || | ||||| Sbjct 991863 AAGCAAGGAGTTACGCACACC 991843 >seq10 Length=1751495 Score = 89.7 bits (98), Expect = 1e-12 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 35393 GAGGGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAATATGAT 35452 || || ||||| |||||||| || || ||||||||| | || || ||||| |||| | Sbjct 1649682 GAAGGTGATTTAGGACCCGTTTATGGGTTCCAATGGAGACACTTCGGTGCAAAATACAAG 1649623 Query 35453 ACCTGTTCTTCCGATTATACTGGAAAGGGTATTGATCAATTGGCCAATATACTAAAGACC 35512 || ||| ||||||||| || | ||| |||||||| || || | | | | Sbjct 1649622 ACTTGTGACGACGATTATACAGGGCATGGTTTTGATCAACTGCAAGATGTGATTCACAAA 1649563 Query 35513 CTGAGAGAAAATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTATGGATCTT 35572 ||| | ||||| ||||||| | || ||||||| || |||||||| ||| || Sbjct 1649562 TTGAAAACGAATCCTTATGATAGGCGAATTATTATGAGCGCTTGGAATCCACCAGATTTT 1649503 Query 35573 CACCTTATGGCTCTTCCTCCATGCCACATGACTGCTCAATTTTATGT 35619 | || ||||| | || |||||||| || | | ||||||||||| Sbjct 1649502 CCGCTCATGGCATTGCCGCCATGCCATGTGTTTTCACAATTTTATGT 1649456 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989583771777190