Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20parabailii_20[genbank_20GCA_5F001984395.2_202017 -03-16] 18 sequences; 20,864,403 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq14 208 7e-49 seq9 183 3e-41 seq12 134 1e-26 seq1 107 2e-18 >seq14 Length=1283838 Score = 208 bits (230), Expect = 7e-49 Identities = 464/694 (67%), Gaps = 2/694 (0%) Strand=Plus/Minus Query 37941 AAAATCATTCCCCCATACATCGCATAATCCTGGACATTCGCATGGACACATTAGAGACCA 38000 ||| || ||||| | || || |||| ||||| ||||| || | | |||| ||| Sbjct 991155 AAACTCTTTCCCGTAAACGTCAGATAAACCTGGCGCTTCGCTAGGGGAGAAAAGAGTCCA 991096 Query 38001 TTCTTCATCTTTTTCTACGCGTTCCATAAATAAATCAGGTACCCATAATGCAGTAAATAA 38060 |||| | | | |||||| |||| ||||||||| || | | ||||||||| | ||| || Sbjct 991095 TTCTCCGTTCTGTTCTACACGTTTCATAAATAAGTCGGAAATCCATAATGCTGGAAACAA 991036 Query 38061 ATCTTTGGTTCTATATTCTTCGTTCCCTACATTCTTTCTTAAGCTTAGAAAATCGAATAT 38120 |||| ||| | | || || || || |||||| || | | | || ||||| || Sbjct 991035 ATCTCTGGCGCGAATCTCCTCCTTACCGTGATTCTTCCTAATGTCGATGAAGTCGAAAAT 990976 Query 38121 ATCAGCGTGCCATGGTTCTATATAAATCGACATTGCTCCTGGTCTTTTATCACCTCCCTG 38180 ||| |||||||| || || | ||| | | | || ||||||||||||| ||| || || Sbjct 990975 ATCTGCGTGCCAAGGCTCCAAATATAGGGCAAAAGCGCCTGGTCTTTTATTACCACCTTG 990916 Query 38181 ATTAATATATCTAACTGTGTTATTATATATTCTTAACATAGGTACTATACCATTAGATTT 38240 | | ||| ||| | || |||||| | | | | |||||| | || ||||||||| | Sbjct 990915 GTCCACATACCTAGCGGTATTATTAAAGACACGAATCATAGGGATTAACCCATTAGATGT 990856 Query 38241 GCCGTTTATACCGGATATATAAGTACCCTTAGCTCGTATATTACTTATCGACAATCCTAT 38300 || || |||| | ||||| | ||| | | || ||||| || ||| || || Sbjct 990855 ACCATTGGTACCAGCAATATACGAACCAGTGGAGCGGATATTGTGGATATGCAAACCAAT 990796 Query 38301 TCCACCTGCATGTTTTGATATTAAAGCGCATTGTTTTAACGTATCAAATATACCTTCTAT 38360 ||||| ||| || || || | ||| |||| ||| | || ||| | ||||| || || Sbjct 990795 ACCACCAGCAGTCTTGGAAATCATAGCACATTCTTTGAGAGTGTCATAGATACCCTCGAT 990736 Query 38361 ACTGTCATCCTTTATTGGTAGTATAAAACAACTAGACATTTGAGGCAATGGAGTTCCGGC 38420 | ||||| || || | || | |||||| || ||| ||||| ||||||||| || Sbjct 990735 AGAATCATCTTTCATGGCTACCAGGAAACAAGAAGCCATCTGAGGATGTGGAGTTCCTGC 990676 Query 38421 GTTAAATAATGTAGGAGATGCATGTATGAACCATTTTTCCGACAAATAATTATATGTTTC 38480 || |||| ||||| || ||||| ||||| | || |||| || || || || Sbjct 990675 ATTGAATAGCGTAGGGGAAGCATGAATGAAATACCTTAAAGACATGAGGTTGTAAGTCTC 990616 Query 38481 TATTACATCATCTATATCACCGCCGTGAATACCTAGAGATACCCTCATTAGCATATGTTG 38540 || | | | |||||| | |||||||| || || || || ||||||| | |||||| Sbjct 990615 AATGGCTGCCTTAATATCATCACCGTGAATGCCAAGCGAAACTCTCATTATTAAATGTTG 990556 Query 38541 TGGTCTTTCTATTATTTTATTATTCTGTTTAAGTAGATACGATTTTTCTAATGTTTTTAT 38600 ||||| || | | | ||| |||||| | || || ||| || || || | Sbjct 990555 AGGTCTCTCAGCGACTGCACCATTAATTTTAAGCAAGTATGAACGTTCCAAAGTCTTGAA 990496 Query 38601 TCCAAAATAACT-ATATGAATAATCTCTATCGTA 38633 ||||| ||| | | || | ||||||||||||| Sbjct 990495 ACCAAAGTAATTGAACTGGA-AATCTCTATCGTA 990463 >seq9 Length=2005801 Score = 183 bits (202), Expect = 3e-41 Identities = 406/609 (67%), Gaps = 0/609 (0%) Strand=Plus/Plus Query 37941 AAAATCATTCCCCCATACATCGCATAATCCTGGACATTCGCATGGACACATTAGAGACCA 38000 ||| || ||||| | ||||| |||| ||||| ||||| || | | || | ||| Sbjct 289821 AAACTCTTTCCCGTAAACATCAGATAAACCTGGCGCTTCGCTAGGGGAGAAAAGGGTCCA 289880 Query 38001 TTCTTCATCTTTTTCTACGCGTTCCATAAATAAATCAGGTACCCATAATGCAGTAAATAA 38060 |||| | | | |||||| || | ||||||||| || | | |||||| || | ||| || Sbjct 289881 TTCTCCGTTCTGTTCTACACGCTTCATAAATAAGTCGGAAATCCATAACGCTGGAAACAA 289940 Query 38061 ATCTTTGGTTCTATATTCTTCGTTCCCTACATTCTTTCTTAAGCTTAGAAAATCGAATAT 38120 |||| ||| | | || || || || ||| || || | | | |||||| || || Sbjct 289941 ATCTCTGGCGCGAATCTCCTCCTTACCGTGATTTTTCCTAATGTCGATAAAATCAAAAAT 290000 Query 38121 ATCAGCGTGCCATGGTTCTATATAAATCGACATTGCTCCTGGTCTTTTATCACCTCCCTG 38180 |||||||||||| || || | ||| | | | || || |||||||||| ||| || || Sbjct 290001 ATCAGCGTGCCAGGGCTCCAAATATAGGGCAAAAGCGCCAGGTCTTTTATTACCACCTTG 290060 Query 38181 ATTAATATATCTAACTGTGTTATTATATATTCTTAACATAGGTACTATACCATTAGATTT 38240 | | ||| | | | || |||||| | | | | ||| || | || ||||||||| | Sbjct 290061 GTCCACATACCGAGCAGTATTATTAAAAACACGAATCATGGGGATTAGTCCATTAGATGT 290120 Query 38241 GCCGTTTATACCGGATATATAAGTACCCTTAGCTCGTATATTACTTATCGACAATCCTAT 38300 ||||| |||| | ||||| | ||| | | || ||||| || ||| || || Sbjct 290121 ACCGTTGGTACCAGCAATATACGAACCAGTTGAACGGATATTGTGGATATGCAAACCAAT 290180 Query 38301 TCCACCTGCATGTTTTGATATTAAAGCGCATTGTTTTAACGTATCAAATATACCTTCTAT 38360 ||||| ||| || || || | ||| |||| ||||| || ||| | ||||| || || Sbjct 290181 ACCACCAGCAGTCTTGGAGATCATAGCACATTCTTTTAGAGTGTCATAGATACCCTCGAT 290240 Query 38361 ACTGTCATCCTTTATTGGTAGTATAAAACAACTAGACATTTGAGGCAATGGAGTTCCGGC 38420 | |||||| || || | || | || ||| || ||| ||||| ||| ||||| || Sbjct 290241 AGAGTCATCTTTCATGGCTACCAGGAAGCAAGAAGCCATCTGAGGATGTGGGGTTCCTGC 290300 Query 38421 GTTAAATAATGTAGGAGATGCATGTATGAACCATTTTTCCGACAAATAATTATATGTTTC 38480 || |||| ||||| || || || ||||| | || |||| || || || || Sbjct 290301 ATTGAATAGCGTAGGGGAAGCGTGGATGAAATACCTTAGAGACATTAGGTTGTAAGTCTC 290360 Query 38481 TATTACATCATCTATATCACCGCCGTGAATACCTAGAGATACCCTCATTAGCATATGTTG 38540 || | | | |||||| | || ||||| || || || || ||||||| | |||||| Sbjct 290361 AATAGCTGCCTTAATATCATCACCATGAATGCCAAGCGAAACTCTCATTATTAAATGTTG 290420 Query 38541 TGGTCTTTC 38549 ||||| || Sbjct 290421 AGGTCTCTC 290429 >seq12 Length=1443312 Score = 134 bits (148), Expect = 1e-26 Identities = 397/605 (66%), Gaps = 14/605 (2%) Strand=Plus/Plus Query 11620 AAACATTAAACACGCAAAATCACAATGTAAACCTTCGTCTCTACTTATTAGTTCATTAGA 11679 |||||||| ||| ||||| || || || ||||| ||||||| |||| || || || Sbjct 767668 AAACATTAGACAAGCAAAGTCTGTGTGCAATCCTTCATCTCTACAGATTAACTCGTTTGA 767727 Query 11680 AAATGTTAATCCGGGCATCAATCCTCGtttttttATCCAAAATATAGCAGCAAATGAACC 11739 ||| || | || ||||| | || ||||| | |||||| || || ||||| || || Sbjct 767728 AAAGGTCAGGCCTGGCATGAGGCCCTTCTTTTTGAGCCAAAAGATGGCGGCAAAAGATCC 767787 Query 11740 AGAAAAGAATATTCCCTCCACAGCTGCAAATGCTACTACTCTTTCTCCATATA---CCTT 11796 || || || || || || || || |||||||| || | || || | || | | || Sbjct 767788 CGAGAAAAAGATACCTTCTACTGCGGCAAATGCCACCAGCCTCTCAGCGTAAAGAGCATT 767847 Query 11797 GTTG-CTAGATATCCATTTTCTGGCCCAATCAGCTTTCTTTTTTACGCATTCCATTGTTT 11855 || || || ||||| | | ||||| ||||| || | || | || | Sbjct 767848 GTCATCTTGA-ATCCACCTGATAGCCCACTCAGCCTTTTCCTTGATCTGAGGGATGTGCT 767906 Query 11856 CTATAGCGTTAAATAAATGCATTTT--TTCTATATTATCTCTTACATATGTATCTATTAA 11913 | || || ||||| || | | | ||| || ||| | | ||||| || ||||| Sbjct 767907 CAATCGCATTAAACAA--GAAATCCCGTTCCTTAGGATCCTTGATGTATGTCTCGATTAA 767964 Query 11914 TAAACTATACATTTCTGAATGAATATTTTCCATAGCTATTTGAAATCCATAGAAACATCG 11973 ||| || | || ||||| ||||||||||| || || || || ||||||||| Sbjct 767965 TAATGAGTAAGTCTCCGAATGGATATTTTCCATCATGATCTGGAACCCGTAGAAACATTT 768024 Query 11974 TGCCTCTGAACACTGTACATCCACATAAAATCTTTCCGCTAAATTCTCATTTACAATACC 12033 ||||||| ||| || || | |||| | || ||||||||||||| ||||| || Sbjct 768025 GGCCTCTGGTATCTGAACCTCTGCGGAAAAATTCTCAACTAAATTCTCATTGACAATTCC 768084 Query 12034 ATCACTAGATGCAAAAAATGCTAGTATATGTTTTATAAAGTATTTTTCGTCTTTAGTTA- 12092 ||| | ||||| || ||||| | |||||| || | ||| ||| || | Sbjct 768085 GTCAGATGCCGCAAAGAAAGCTAGGACTCTAGACATAAAGAATCTCTCGCCTTCTGTCAT 768144 Query 12093 ---ATTTATCCCAATCATCTAAATCTTTTGATAAATCTACTTCTTCAACGGTCCAAAAAC 12149 |||| |||||||||| || |||||| || | || | || || | ||||| ||| Sbjct 768145 CCTATTT-TCCCAATCATTTATATCTTTCGACAGGTCAATCTCCTCTGCAGTCCAGAAAG 768203 Query 12150 TTGCCACTGATTGTTTATACATTTTCCAGATATCATGATACTTAATAGGGAAAATAACGA 12209 |||| | | ||| || | ||| || ||||||||| |||||||||| | |||| Sbjct 768204 ATGCCTCCGCCCTTTTGTAGGCCTGCCAAATCTCATGATACCTAATAGGGAAGAGCACGA 768263 Query 12210 ACCTA 12214 ||||| Sbjct 768264 ACCTA 768268 >seq1 Length=2110500 Score = 107 bits (118), Expect = 2e-18 Identities = 391/605 (65%), Gaps = 14/605 (2%) Strand=Plus/Plus Query 11620 AAACATTAAACACGCAAAATCACAATGTAAACCTTCGTCTCTACTTATTAGTTCATTAGA 11679 |||||||| || ||||| || || || || || ||||||| || | || || || Sbjct 1034073 AAACATTAGGCAAGCAAAGTCTGTGTGCAATCCCTCATCTCTACAGATCAACTCGTTTGA 1034132 Query 11680 AAATGTTAATCCGGGCATCAATCCTCGtttttttATCCAAAATATAGCAGCAAATGAACC 11739 ||| || | || ||||| | ||| ||||| | |||||| || || ||||| || || Sbjct 1034133 AAAGGTCAGGCCAGGCATGAGACCTTTCTTTTTGAGCCAAAAGATTGCGGCAAACGACCC 1034192 Query 11740 AGAAAAGAATATTCCCTCCACAGCTGCAAATGCTACTACTCTTTCTCCATATA---CCTT 11796 || || || || || || || || |||||||| || | || || | || | | || Sbjct 1034193 CGAGAAAAAGATACCTTCTACTGCGGCAAATGCCACCAACCTCTCAGCGTAAAGAGCATT 1034252 Query 11797 GTTG-CTAGATATCCATTTTCTGGCCCAATCAGCTTTCTTTTTTACGCATTCCATTGTTT 11855 || || || ||||| | ||||||| ||||| || | || | || || Sbjct 1034253 GTCATCTTGA-ATCCACCTGATGGCCCACTCAGCCTTTTCCTTGATCTGAGGGATGTGTT 1034311 Query 11856 CTATAGCGTTAAATAAATGCATTTT--TTCTATATTATCTCTTACATATGTATCTATTAA 11913 | || || ||||| || | | | ||| || ||| | | ||||| || || | Sbjct 1034312 CAATGGCATTAAACAA--GAAATCCCGTTCCTTAGGATCCTTGATGTATGTCTCGATAAG 1034369 Query 11914 TAAACTATACATTTCTGAATGAATATTTTCCATAGCTATTTGAAATCCATAGAAACATCG 11973 ||| || | || ||||| ||||||||||| || ||||| || ||||||||| Sbjct 1034370 TAATGAGTAAGTCTCCGAATGGATATTTTCCATCATGATCTGAAACCCGTAGAAACATTT 1034429 Query 11974 TGCCTCTGAACACTGTACATCCACATAAAATCTTTCCGCTAAATTCTCATTTACAATACC 12033 ||||||| || || || | |||| | || |||| |||||||| ||||| || Sbjct 1034430 GGCCTCTGGTATTTGAACCTCTGCGGAAAAATTCTCAACTAAGTTCTCATTGACAATTCC 1034489 Query 12034 ATCACTAGATGCAAAAAATGCTAGTATATGTTTTATAAAGTATTTTTCGTCTTTAGTTA- 12092 ||| | ||||| || ||||| | | || ||| || | || ||| || | Sbjct 1034490 GTCAGATGCGGCAAAGAAAGCTAGGACCCTTGACATGAAGAATCTCTCACCTTCCGTCAT 1034549 Query 12093 ---ATTTATCCCAATCATCTAAATCTTTTGATAAATCTACTTCTTCAACGGTCCAAAAAC 12149 |||| |||||||||| || |||||| || | || | || || | ||||| ||| Sbjct 1034550 CCTATTT-TCCCAATCATTTATATCTTTCGACAGGTCAATCTCCTCTGCAGTCCAGAAAG 1034608 Query 12150 TTGCCACTGATTGTTTATACATTTTCCAGATATCATGATACTTAATAGGGAAAATAACGA 12209 |||| ||| ||| || | ||| || ||||||||| | || ||||| | || | Sbjct 1034609 ATGCCTCTGCCCTTTTGTAAGCCTGCCAAATCTCATGATACCTGATGGGGAAGAGCACAA 1034668 Query 12210 ACCTA 12214 ||||| Sbjct 1034669 ACCTA 1034673 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468524694581920