Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zygosaccharomyces_20parabailii_20[genbank_20GCA_5F001984395.2_202017
-03-16] 18 sequences; 20,864,403 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq1 109 5e-19
seq9 96.9 3e-15
seq14 91.5 1e-13
seq10 84.2 2e-11
>seq1
Length=2110500
Score = 109 bits (120), Expect = 5e-19
Identities = 316/482 (66%), Gaps = 7/482 (1%)
Strand=Plus/Minus
Query 52565 AAAAGGATGATTGGGCATTGAAATGGATCGAAAACGACAAAGCCACTTTTGCCGAACGTC 52624
|||||| ||| ||||| | | ||||| || | ||||| || || || || |
Sbjct 1034290 AAAAGGCTGAGTGGGCCATCAGGTGGATTCAAGATGACAATGCTCTTTACGCTGAGAGGT 1034231
Query 52625 TGGTCGCGTTTGCTATAGTGGAAGGTGTGtttttttCGGGTAGTTTTGCGGCAATATTTT 52684
|||| || ||||| ||| |||||| | ||||| ||||| ||||| ||||| ||||
Sbjct 1034230 TGGTGGCATTTGCCGCAGTAGAAGGTATCTTTTTCTCGGGGTCGTTTGCCGCAATCTTTT 1034171
Query 52685 ACATCAAAACCTTGGGCATAATGCCCGGCCTCACGTTTAGCAACGAGTTGATATCGCGCG 52744
|||||| || | ||||| ||||| || ||| ||||||||||| | | |
Sbjct 1034170 GGCTCAAAAAGAAAGGTCTCATGCCTGGCCTGACCTTTTCAAACGAGTTGATCTGTAGAG 1034111
Query 52745 ACGAAGGAATGCACACAGATTTTGCGTGTTTGTATTATAATACGCGCGTTAAAGAAAAAT 52804
| || ||| |||||||||| ||||| ||| | || | | ||| ||| ||
Sbjct 1034110 ATGAGGGATTGCACACAGACTTTGC----TTGCCTAATGTTTTCCCATCTAAGGAACAAG 1034055
Query 52805 TGTCA-TATGAAAAAATTCTAGACATGTTTAAAGAGGCCGTCGACATTGA-AAAAGAGTT 52862
| | || | ||| | || ||| ||| || ||||| || || |||||| |
Sbjct 1034054 CCTGACCCGGATATTATTGAAAGGATTATTACAGAAGCTGTCGAGATCGAGAAAAGA-TA 1033996
Query 52863 TTTTACGGACGCTTTACCCGTATCATTGTTGGGCATGAACGCGACCATGATGTGCGAGTA 52922
||| | ||||| | ||||| | || |||||||||| || | ||||| ||||
Sbjct 1033995 TTTCATTGACGCACTCCCCGTGGCTCTGCTGGGCATGAATGCCGCGCTGATGAATCAGTA 1033936
Query 52923 CATCGAGTTTGTTGCGGACAGACTGTTGATGCAGCTCGGTCAGCCGAAATACTATAATGC 52982
| | |||||||| || ||||| ||| || | || || | |||||||| ||||
Sbjct 1033935 CGTTGAGTTTGTAGCAGACAGGCTGCTGGTCGCTCTGGGGAACAAGAAATACTTCAATGT 1033876
Query 52983 GCGTAACCCCTTTTCGTTTATGAACAACATATCGCTCGAGGGCAAAACAAACTTTTTCGA 53042
||| || ||| |||||| | || || ||||| | || ||||| ||||| || ||
Sbjct 1033875 TACTAATCCGTTTGATTTTATGGAGAATATTTCGCTGGCAGGAAAAACTAACTTCTTTGA 1033816
Query 53043 GA 53044
||
Sbjct 1033815 GA 1033814
>seq9
Length=2005801
Score = 96.9 bits (106), Expect = 3e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| |||| || | |||||| ||||| | || |||||||||||||||||||| || |
Sbjct 502395 CCACCTCTTAGTCTCAAAACCAAGTGCAAAGTTGACTCTTTTTGAATGTTATAGTCAGAC 502454
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| || || || || ||||| ||||| ||| |||||| | ||| || || || ||
Sbjct 502455 AGAGTTCTTCCATCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTGTTGGTCAGGTGGG 502514
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717
|| |||||||| || ||| || |||| | || | ||||| | || || |||
Sbjct 502515 ATACCTTCTTTATCCTGGATCTTCGACTTTACGTTGTCGATAGTGTCAGAGGATTCAACC 502574
Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765
|||| || | ||||| || || | || || || ||||| ||||||
Sbjct 502575 TCAAGTGTAATAGTCTTACCAGTAAGAGTCTTAACAAATATCTGCATA 502622
Score = 96.9 bits (106), Expect = 3e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| |||| || | |||||| | || | || |||||||||||||||||||| ||
Sbjct 503079 CCACCTCTTAGTCTCAAAACCAGATGCAAAGTTGACTCTTTTTGAATGTTATAGTCAGAT 503138
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| || || || || ||||| ||||| ||| |||||| | ||| || || || ||
Sbjct 503139 AGAGTTCTTCCATCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTGTTGGTCAGGTGGG 503198
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717
|| |||||||| || ||| || |||| | || | ||||| | | |||||||
Sbjct 503199 ATACCTTCTTTATCTTGGATCTTCGACTTTACGTTGTCGATAGTGTCAGAAGACTCCACC 503258
Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765
|| | || | ||||| |||||||| ||||| || || || ||||||
Sbjct 503259 TCTAATGTAATAGTCTTACCGGTCAATGTTTTAACAAAAATCTGCATA 503306
Score = 82.4 bits (90), Expect = 8e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| |||| || | |||||| | || | || |||||||||||||||||||| ||
Sbjct 502623 CCACCTCTTAGTCTCAAAACCAGATGCAAAGTTGACTCTTTTTGAATGTTATAGTCAGAT 502682
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| || || || || ||||| ||||| ||| |||||| | ||| || || || ||
Sbjct 502683 AGAGTTCTTCCATCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTGTTGGTCAGGTGGG 502742
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717
|| |||||||| || ||| || |||| | || | ||||| | || || |||
Sbjct 502743 ATACCTTCTTTATCCTGGATCTTCGACTTTACGTTGTCGATAGTGTCAGAGGATTCAACC 502802
Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765
|||| || | ||||| || || | || || || ||||| ||||||
Sbjct 502803 TCAAGTGTAATAGTCTTACCAGTAAGAGTCTTAACAAATATCTGCATA 502850
Score = 82.4 bits (90), Expect = 8e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| |||| || | |||||| | || | || |||||||||||||||||||| ||
Sbjct 502851 CCACCTCTTAGTCTCAAAACCAGATGCAAAGTTGACTCTTTTTGAATGTTATAGTCAGAT 502910
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| || || || || ||||| ||||| ||| |||||| | ||| || || || ||
Sbjct 502911 AGAGTTCTTCCATCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTGTTGGTCAGGTGGG 502970
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717
|| |||||||| || ||| || |||| | || | ||||| | || || |||
Sbjct 502971 ATACCTTCTTTATCCTGGATCTTCGACTTTACGTTGTCGATAGTGTCAGAGGATTCAACC 503030
Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765
|||| || | ||||| || || | || || || ||||| ||||||
Sbjct 503031 TCAAGTGTAATAGTCTTACCAGTAAGAGTCTTAACAAATATCTGCATA 503078
>seq14
Length=1283838
Score = 91.5 bits (100), Expect = 1e-13
Identities = 159/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| |||| ||| | |||||| | ||| | ||||| ||||||||||||||||| ||
Sbjct 779196 CCACCTCTTAATCTCAAAACCAGGTGCAGGGTAGATTCTTTTTGAATGTTATAGTCAGAA 779137
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| || || || || ||||| ||||||||| |||||| | || || ||||| ||
Sbjct 779136 AGAGTTCTTCCATCCTCCAGCTGCTTACCAGCAAAGATCAATCTCTGTTGGTCGGGCGGA 779077
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716
||||| || ||||| ||| | || | || | | || | |||||| | || || ||
Sbjct 779076 ATGCCCTCCTTGTC-CTGAATCTTCGACTTCACGTTGTCGATTGTGTCAGAGGATTCAAC 779018
Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765
||||| || | ||||| || || | || || || || || ||||||
Sbjct 779017 CTCAAGTGTTATAGTCTTACCAGTAAGAGTCTTAACAAAAATCTGCATA 778969
>seq10
Length=1751495
Score = 84.2 bits (92), Expect = 2e-11
Identities = 146/210 (70%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 139556 ACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCG 139615
|| ||||| | ||||| || || ||||||||||| || || || || || ||
Sbjct 575208 ACCAAGTGCAAGGTAGATTCCTTCTGAATGTTATAGTCAGACAAGGTTCTGCCATCCTCC 575267
Query 139616 AGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTG 139675
| || ||||||||| |||||| | |||||||| || || || ||||| ||||| ||
Sbjct 575268 AATTGCTTACCAGCAAAGATCAATCTCTGCTGATCAGGTGGAATACCTTCCTTGTC-TTG 575326
Query 139676 ATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTT 139734
| | |||| || | | || | ||||| | | ||| || |||| ||| | |||||
Sbjct 575327 AATCTTTGACTTGACATTGTCGATAGTGTCAGAAGACTCGACTTCAAGGGTAATAGTCTT 575386
Query 139735 GCCGGTCAACGTTTTTACGAATATTTGCAT 139764
|| ||||| || || ||||| || |||||
Sbjct 575387 ACCCGTCAAGGTCTTGACGAAAATCTGCAT 575416
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496063888385600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |