Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20parabailii_20[genbank_20GCA_5F001984395.2_202017 -03-16] 18 sequences; 20,864,403 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq1 109 5e-19 seq9 96.9 3e-15 seq14 91.5 1e-13 seq10 84.2 2e-11 >seq1 Length=2110500 Score = 109 bits (120), Expect = 5e-19 Identities = 316/482 (66%), Gaps = 7/482 (1%) Strand=Plus/Minus Query 52565 AAAAGGATGATTGGGCATTGAAATGGATCGAAAACGACAAAGCCACTTTTGCCGAACGTC 52624 |||||| ||| ||||| | | ||||| || | ||||| || || || || | Sbjct 1034290 AAAAGGCTGAGTGGGCCATCAGGTGGATTCAAGATGACAATGCTCTTTACGCTGAGAGGT 1034231 Query 52625 TGGTCGCGTTTGCTATAGTGGAAGGTGTGtttttttCGGGTAGTTTTGCGGCAATATTTT 52684 |||| || ||||| ||| |||||| | ||||| ||||| ||||| ||||| |||| Sbjct 1034230 TGGTGGCATTTGCCGCAGTAGAAGGTATCTTTTTCTCGGGGTCGTTTGCCGCAATCTTTT 1034171 Query 52685 ACATCAAAACCTTGGGCATAATGCCCGGCCTCACGTTTAGCAACGAGTTGATATCGCGCG 52744 |||||| || | ||||| ||||| || ||| ||||||||||| | | | Sbjct 1034170 GGCTCAAAAAGAAAGGTCTCATGCCTGGCCTGACCTTTTCAAACGAGTTGATCTGTAGAG 1034111 Query 52745 ACGAAGGAATGCACACAGATTTTGCGTGTTTGTATTATAATACGCGCGTTAAAGAAAAAT 52804 | || ||| |||||||||| ||||| ||| | || | | ||| ||| || Sbjct 1034110 ATGAGGGATTGCACACAGACTTTGC----TTGCCTAATGTTTTCCCATCTAAGGAACAAG 1034055 Query 52805 TGTCA-TATGAAAAAATTCTAGACATGTTTAAAGAGGCCGTCGACATTGA-AAAAGAGTT 52862 | | || | ||| | || ||| ||| || ||||| || || |||||| | Sbjct 1034054 CCTGACCCGGATATTATTGAAAGGATTATTACAGAAGCTGTCGAGATCGAGAAAAGA-TA 1033996 Query 52863 TTTTACGGACGCTTTACCCGTATCATTGTTGGGCATGAACGCGACCATGATGTGCGAGTA 52922 ||| | ||||| | ||||| | || |||||||||| || | ||||| |||| Sbjct 1033995 TTTCATTGACGCACTCCCCGTGGCTCTGCTGGGCATGAATGCCGCGCTGATGAATCAGTA 1033936 Query 52923 CATCGAGTTTGTTGCGGACAGACTGTTGATGCAGCTCGGTCAGCCGAAATACTATAATGC 52982 | | |||||||| || ||||| ||| || | || || | |||||||| |||| Sbjct 1033935 CGTTGAGTTTGTAGCAGACAGGCTGCTGGTCGCTCTGGGGAACAAGAAATACTTCAATGT 1033876 Query 52983 GCGTAACCCCTTTTCGTTTATGAACAACATATCGCTCGAGGGCAAAACAAACTTTTTCGA 53042 ||| || ||| |||||| | || || ||||| | || ||||| ||||| || || Sbjct 1033875 TACTAATCCGTTTGATTTTATGGAGAATATTTCGCTGGCAGGAAAAACTAACTTCTTTGA 1033816 Query 53043 GA 53044 || Sbjct 1033815 GA 1033814 >seq9 Length=2005801 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || |||| || | |||||| ||||| | || |||||||||||||||||||| || | Sbjct 502395 CCACCTCTTAGTCTCAAAACCAAGTGCAAAGTTGACTCTTTTTGAATGTTATAGTCAGAC 502454 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || || || || ||||| ||||| ||| |||||| | ||| || || || || Sbjct 502455 AGAGTTCTTCCATCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTGTTGGTCAGGTGGG 502514 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 || |||||||| || ||| || |||| | || | ||||| | || || ||| Sbjct 502515 ATACCTTCTTTATCCTGGATCTTCGACTTTACGTTGTCGATAGTGTCAGAGGATTCAACC 502574 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 |||| || | ||||| || || | || || || ||||| |||||| Sbjct 502575 TCAAGTGTAATAGTCTTACCAGTAAGAGTCTTAACAAATATCTGCATA 502622 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || |||| || | |||||| | || | || |||||||||||||||||||| || Sbjct 503079 CCACCTCTTAGTCTCAAAACCAGATGCAAAGTTGACTCTTTTTGAATGTTATAGTCAGAT 503138 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || || || || ||||| ||||| ||| |||||| | ||| || || || || Sbjct 503139 AGAGTTCTTCCATCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTGTTGGTCAGGTGGG 503198 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 || |||||||| || ||| || |||| | || | ||||| | | ||||||| Sbjct 503199 ATACCTTCTTTATCTTGGATCTTCGACTTTACGTTGTCGATAGTGTCAGAAGACTCCACC 503258 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 || | || | ||||| |||||||| ||||| || || || |||||| Sbjct 503259 TCTAATGTAATAGTCTTACCGGTCAATGTTTTAACAAAAATCTGCATA 503306 Score = 82.4 bits (90), Expect = 8e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || |||| || | |||||| | || | || |||||||||||||||||||| || Sbjct 502623 CCACCTCTTAGTCTCAAAACCAGATGCAAAGTTGACTCTTTTTGAATGTTATAGTCAGAT 502682 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || || || || ||||| ||||| ||| |||||| | ||| || || || || Sbjct 502683 AGAGTTCTTCCATCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTGTTGGTCAGGTGGG 502742 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 || |||||||| || ||| || |||| | || | ||||| | || || ||| Sbjct 502743 ATACCTTCTTTATCCTGGATCTTCGACTTTACGTTGTCGATAGTGTCAGAGGATTCAACC 502802 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 |||| || | ||||| || || | || || || ||||| |||||| Sbjct 502803 TCAAGTGTAATAGTCTTACCAGTAAGAGTCTTAACAAATATCTGCATA 502850 Score = 82.4 bits (90), Expect = 8e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || |||| || | |||||| | || | || |||||||||||||||||||| || Sbjct 502851 CCACCTCTTAGTCTCAAAACCAGATGCAAAGTTGACTCTTTTTGAATGTTATAGTCAGAT 502910 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || || || || ||||| ||||| ||| |||||| | ||| || || || || Sbjct 502911 AGAGTTCTTCCATCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTGTTGGTCAGGTGGG 502970 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 || |||||||| || ||| || |||| | || | ||||| | || || ||| Sbjct 502971 ATACCTTCTTTATCCTGGATCTTCGACTTTACGTTGTCGATAGTGTCAGAGGATTCAACC 503030 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 |||| || | ||||| || || | || || || ||||| |||||| Sbjct 503031 TCAAGTGTAATAGTCTTACCAGTAAGAGTCTTAACAAATATCTGCATA 503078 >seq14 Length=1283838 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || |||| ||| | |||||| | ||| | ||||| ||||||||||||||||| || Sbjct 779196 CCACCTCTTAATCTCAAAACCAGGTGCAGGGTAGATTCTTTTTGAATGTTATAGTCAGAA 779137 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || || || || ||||| ||||||||| |||||| | || || ||||| || Sbjct 779136 AGAGTTCTTCCATCCTCCAGCTGCTTACCAGCAAAGATCAATCTCTGTTGGTCGGGCGGA 779077 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 ||||| || ||||| ||| | || | || | | || | |||||| | || || || Sbjct 779076 ATGCCCTCCTTGTC-CTGAATCTTCGACTTCACGTTGTCGATTGTGTCAGAGGATTCAAC 779018 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 ||||| || | ||||| || || | || || || || || |||||| Sbjct 779017 CTCAAGTGTTATAGTCTTACCAGTAAGAGTCTTAACAAAAATCTGCATA 778969 >seq10 Length=1751495 Score = 84.2 bits (92), Expect = 2e-11 Identities = 146/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 139556 ACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCG 139615 || ||||| | ||||| || || ||||||||||| || || || || || || Sbjct 575208 ACCAAGTGCAAGGTAGATTCCTTCTGAATGTTATAGTCAGACAAGGTTCTGCCATCCTCC 575267 Query 139616 AGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTG 139675 | || ||||||||| |||||| | |||||||| || || || ||||| ||||| || Sbjct 575268 AATTGCTTACCAGCAAAGATCAATCTCTGCTGATCAGGTGGAATACCTTCCTTGTC-TTG 575326 Query 139676 ATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTT 139734 | | |||| || | | || | ||||| | | ||| || |||| ||| | ||||| Sbjct 575327 AATCTTTGACTTGACATTGTCGATAGTGTCAGAAGACTCGACTTCAAGGGTAATAGTCTT 575386 Query 139735 GCCGGTCAACGTTTTTACGAATATTTGCAT 139764 || ||||| || || ||||| || ||||| Sbjct 575387 ACCCGTCAAGGTCTTGACGAAAATCTGCAT 575416 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496063888385600