Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20parabailii_20[genbank_20GCA_5F001984395.2_202017 -03-16] 18 sequences; 20,864,403 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq1 147 2e-30 seq12 129 6e-25 >seq1 Length=2110500 Score = 147 bits (162), Expect = 2e-30 Identities = 473/724 (65%), Gaps = 10/724 (1%) Strand=Plus/Plus Query 13581 TTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTT 13640 ||||| || || ||| || || ||||||||||||||||| ||| |||| || ||||| Sbjct 1033792 TTTTGGTAATCCGAAACCCTCTTCTCAAAGAAGTTAGTTTTTCCTGCCAGCGAAATATTC 1033851 Query 13641 TCCATAAAATCAAATGGATTTATTGACATA-AACACTTTATCACAACCTAGTTCTAATAG 13699 |||||||||||||| ||||| | | |||| || ||| | || || | | || Sbjct 1033852 TCCATAAAATCAAACGGATT-AGTAACATTGAAGTATTTCTTGTTCCCCAGAGCGACCAG 1033910 Query 13700 TAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAG 13759 | || || || | |||||||| || ||| ||| | | |||||| || | || Sbjct 1033911 CAGCCTGTCTGCTACAAACTCAACGTACTGATTCATCAGCGCGGCATTCATGCCCAGCAG 1033970 Query 13760 TTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCTTTTATAAT 13819 || || | | | | ||| || ||| || || ||||| ||| | ||||| Sbjct 1033971 AGCCACGGGGAGTGCGTCAATGAAATATCTTTTCTCGATCTCGACAGCTTCTGTAATAAT 1034030 Query 13820 AATTGTAATAATCTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAAA 13879 || |||||| || ||| | ||||||| ||| |||| || ||||| Sbjct 1034031 CCTTTCAATAATATCCGGGTCAGGCTTGTTCCTTAGATGGGAAAACATTAGGCAAGCAAA 1034090 Query 13880 ATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCAT 13939 || || | ||||||||||||| || | ||||||||||| || | || ||||| Sbjct 1034091 GTCTGTGTGCAATCCCTCATCTCTACAGATCAACTCGTTTGAAAAGGTCAGGCCAGGCAT 1034150 Query 13940 CAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTC 13999 | ||| ||||| | |||||| ||||| ||||| ||||| || || || || || || Sbjct 1034151 GAGACCTTTCTTTTTGAGCCAAAAGATTGCGGCAAACGACCCCGAGAAAAAGATACCTTC 1034210 Query 14000 AACTGCAGCAAACGCTATTAATCGTTC-TCCAAACGATGCTTTTTTGT-TCGATATCCAT 14057 ||||| ||||| || | || | || | || || || || | | | || ||||| Sbjct 1034211 TACTGCGGCAAATGCCACCAACCTCTCAGCGTAAAGA-GCATTGTCATCTTGA-ATCCAC 1034268 Query 14058 TTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAA 14117 | | ||||| |||| |||| || || | || |||||| |||||||| || Sbjct 1034269 CTGATGGCCCACTCAGCCTTTTCCTTGATCTGAGGGATGTGTTCAATGGCATTAAACAAG 1034328 Query 14118 TATTCCTTCTCTTTAG--TACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAG 14175 | ||| || |||| | |||| |||||||| || |||||||| || | || | Sbjct 1034329 AAATCCCGTTCCTTAGGATCCTTG--ATGTATGTCTCGATAAGTAATGAGTAAGTCTCCG 1034386 Query 14176 AGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCCGACCATTGTA 14235 | || || |||||||| |||||||| || || || ||| | || || | ||| | Sbjct 1034387 AATGGATATTTTCCATCATGATCTGAAACCCGTAGAAACATTTGGCCTCTGGTATTTGAA 1034446 Query 14236 CTTCCGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAA 14295 | || | | |||| | || | || || ||||| || || || ||| || ||||| | Sbjct 1034447 CCTCTGCGGAAAAATTCTCAACTAAGTTCTCATTGACAATTCCGTCAGATGCGGCAAAGA 1034506 Query 14296 ATGC 14299 | || Sbjct 1034507 AAGC 1034510 >seq12 Length=1443312 Score = 129 bits (142), Expect = 6e-25 Identities = 469/724 (65%), Gaps = 10/724 (1%) Strand=Plus/Plus Query 13581 TTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTT 13640 ||||| || || ||| || |||||||||||||||||||| ||| |||| || |||||| Sbjct 767387 TTTTGGTAATCCGAAACCCTCTTTTCAAAGAAGTTAGTTTTTCCTGCCAGCGAAATATTT 767446 Query 13641 TCCATAAAATCAAATGGATTTATTGACA-TAAACACTTTATCACAACCTAGTTCTAATAG 13699 |||||||| ||||| ||| ||| | ||| | || ||| | || || | | || Sbjct 767447 TCCATAAAGTCAAACGGA-TTAGTAACATTGAAGTATTTCTTGTTCCCAAGAGCGACCAG 767505 Query 13700 TAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAG 13759 | || || || | |||||||| || ||| ||| | | |||||| || | || Sbjct 767506 CAGCCTGTCTGCTACAAACTCAACGTACTGATTCATCAGCGCGGCATTCATGCCCAGCAG 767565 Query 13760 TTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCTTTTATAAT 13819 || || | | | | ||| | ||| || || ||||| ||| | || || Sbjct 767566 AGCCACGGGGAGCGCGTCGATGAAATACCTTTTCTCGATCTCGACAGCTTCTGTAATGAT 767625 Query 13820 AATTGTAATAATCTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAAA 13879 || |||||| ||| | ||| | | ||||||| ||| |||| ||| ||||| Sbjct 767626 CCTTTCAATAATATCAGGATCAGGCTTGTTTCTTAGATGGGAAAACATTAGACAAGCAAA 767685 Query 13880 ATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCAT 13939 || || | || |||||||||| || | ||||||||||| || | |||||||| Sbjct 767686 GTCTGTGTGCAATCCTTCATCTCTACAGATTAACTCGTTTGAAAAGGTCAGGCCTGGCAT 767745 Query 13940 CAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTC 13999 | || ||||| | |||||| || || ||||| || || || || || || || || Sbjct 767746 GAGGCCCTTCTTTTTGAGCCAAAAGATGGCGGCAAAAGATCCCGAGAAAAAGATACCTTC 767805 Query 14000 AACTGCAGCAAACGCTATTAATCGTTC-TCCAAACGATGCTTTTTTGT-TCGATATCCAT 14057 ||||| ||||| || | | | || | || || || || | | | || ||||| Sbjct 767806 TACTGCGGCAAATGCCACCAGCCTCTCAGCGTAAAGA-GCATTGTCATCTTGA-ATCCAC 767863 Query 14058 TTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAA 14117 | ||||||| |||| |||| || || | || ||||| |||||||| || Sbjct 767864 CTGATAGCCCACTCAGCCTTTTCCTTGATCTGAGGGATGTGCTCAATCGCATTAAACAAG 767923 Query 14118 TATTCCTTCTCTTTAG--TACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAG 14175 | ||| || |||| | |||| |||||||| || || | ||| || | || | Sbjct 767924 AAATCCCGTTCCTTAGGATCCTTG--ATGTATGTCTCGATTAATAATGAGTAAGTCTCCG 767981 Query 14176 AGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCCGACCATTGTA 14235 | || || |||||||| ||||| || || || || ||| | || || | || | Sbjct 767982 AATGGATATTTTCCATCATGATCTGGAACCCGTAGAAACATTTGGCCTCTGGTATCTGAA 768041 Query 14236 CTTCCGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAA 14295 | || | | |||| | || | ||||| ||||| || || || ||| || ||||| | Sbjct 768042 CCTCTGCGGAAAAATTCTCAACTAAATTCTCATTGACAATTCCGTCAGATGCCGCAAAGA 768101 Query 14296 ATGC 14299 | || Sbjct 768102 AAGC 768105 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479727892061200