Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20parabailii_20[genbank_20GCA_5F001984395.2_202017 -03-16] 18 sequences; 20,864,403 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq12 178 2e-39 seq1 176 7e-39 >seq12 Length=1443312 Score = 178 bits (196), Expect = 2e-39 Identities = 400/593 (67%), Gaps = 11/593 (2%) Strand=Plus/Minus Query 124999 TTCCC-ATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGG 125057 ||||| || ||||||||||| |||||| | ||||||| ||| |||| || || ||| Sbjct 768255 TTCCCTATTAGGTATCATGAGATTTGGCAGGCCTACAAAAGGGCGGAGGCATCTTTCTGG 768196 Query 125058 ACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAA 125117 || | || ||| | || ||||| || || | | |||||||| | | | |||| ||| Sbjct 768195 ACTGCAGAGGAGATTGACCTGTCGAAAGATATAAATGATTGGGAAAATAGGATGACAGAA 768136 Query 125118 ACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTC 125177 ||| || ||||| || | | || |||||||| | || || ||||| ||| Sbjct 768135 GGCGAGAGATTCTTTATGTCTAGAGTCCTAGCTTTCTTTGCGGCATCTGACGGAATTGTC 768076 Query 125178 AACGACAATCT-GTTGACACGATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTT 125236 || || ||| | ||||| | || | || ||| | || ||||||| || || Sbjct 768075 AATGAGAATTTAGTTGAGAATTTTTCCGCAGAGGTTCAG-ATACCAGAGGCCAAATGTTT 768017 Query 125237 TTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGA 125296 ||||| ||||| |||||||| || || | || ||||| | ||||| | | || || Sbjct 768016 CTACGGGTTCCAGATCATGATGGAAAATATCCATTCGGAGACTTACTCATTATTAATCGA 767957 Query 125297 CATGTACATTCGCGATCC---GCAACGTAAACACATGCTCTTTAACGCAATCGA-CACGG 125352 | ||||| ||||| | |||| | | || ||||| || || || ||| Sbjct 767956 GACATACATCAAGGATCCTAAGGAACGGGATTTCTTG---TTTAATGCGATTGAGCACA- 767901 Query 125353 TGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTT 125412 | || || |||||||| | |||| || ||||||| | || ||||| || Sbjct 767900 TCCCTCAGATCAAGGAAAAGGCTGAGTGGGCTATCAGGTGGATTCAAGATGACAATGCTC 767841 Query 125413 CGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTT 125472 ||||| || || ||||||||||| ||||| ||||| || ||||| || ||||| || Sbjct 767840 TTTACGCTGAGAGGCTGGTGGCATTTGCCGCAGTAGAAGGTATCTTTTTCTCGGGATCTT 767781 Query 125473 TTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACG 125532 |||| ||||||||||||||||| ||| || |||||||| || ||||| |||| Sbjct 767780 TTGCCGCCATCTTTTGGCTCAAAAAGAAGGGCCTCATGCCAGGCCTGACCTTTTCAAACG 767721 Query 125533 AGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTTT 125585 |||| || | | |||| || || | ||| |||||||| |||| ||||| Sbjct 767720 AGTTAATCTGTAGAGATGAAGGATTGCACACAGACTTTGCTTGTCTAATGTTT 767668 >seq1 Length=2110500 Score = 176 bits (194), Expect = 7e-39 Identities = 407/607 (67%), Gaps = 10/607 (2%) Strand=Plus/Minus Query 124984 GTAGATTTACCCTGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTC 125043 |||| ||| || || ||||||||||||||||| |||||| | ||||||| ||| Sbjct 1034674 GTAGGTTTGTGCTCTTCCCCATCAGGTATCATGAGATTTGGCAGGCTTACAAAAGGGCAG 1034615 Query 125044 AGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGA 125103 |||| || || ||||| | || ||| | || ||||| || || | | |||||||| | Sbjct 1034614 AGGCATCTTTCTGGACTGCAGAGGAGATTGACCTGTCGAAAGATATAAATGATTGGGAAA 1034555 Query 125104 CTCGTTTGACTGAAACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCT 125163 | | |||| ||| |||| || || || || | | || |||||||||| | Sbjct 1034554 ATAGGATGACGGAAGGTGAGAGATTCTTCATGTCAAGGGTCCTAGCTTTCTTTGCCGCAT 1034495 Query 125164 CCGATGGAATCGTCAACGACAATCT-GTTGACACGATTCTCTCAAGAGTTGACCATTCCA 125222 | || ||||| ||||| || || | ||||| | || | || ||| | || ||| Sbjct 1034494 CTGACGGAATTGTCAATGAGAACTTAGTTGAGAATTTTTCCGCAGAGGTTCAA-ATACCA 1034436 Query 125223 GAGGTGTCGTGCTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTAC 125282 |||| || || ||||| || || |||||||| || || | || ||||| | ||| Sbjct 1034435 GAGGCCAAATGTTTCTACGGGTTTCAGATCATGATGGAAAATATCCATTCGGAGACTTAC 1034376 Query 125283 TCTACACTGATTGACATGTACATTCGCGATCC---GCAACGTAAACACATGCTCTTTAAC 125339 || ||| || || | ||||| ||||| | |||| | | || ||||| Sbjct 1034375 TCATTACTTATCGAGACATACATCAAGGATCCTAAGGAACGGGATTTCTTG---TTTAAT 1034319 Query 125340 GCAATCGACACGGTGCCGTCT-ATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGA 125398 || || || || || || || |||||||| | |||| || ||||||| | Sbjct 1034318 GCCATTGA-ACACATCCCTCAGATCAAGGAAAAGGCTGAGTGGGCCATCAGGTGGATTCA 1034260 Query 125399 TGACGACAAGTCTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTT 125458 || ||||| || ||||| || || |||||||||| ||||| ||||| || ||||| Sbjct 1034259 AGATGACAATGCTCTTTACGCTGAGAGGTTGGTGGCATTTGCCGCAGTAGAAGGTATCTT 1034200 Query 125459 CTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACT 125518 || ||||| ||||| || |||||||||||||| ||| || |||||||| || || Sbjct 1034199 TTTCTCGGGGTCGTTTGCCGCAATCTTTTGGCTCAAAAAGAAAGGTCTCATGCCTGGCCT 1034140 Query 125519 GACGCACAGTAACGAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCT 125578 ||| |||||||| || | | |||| ||||| | ||| |||||||| || Sbjct 1034139 GACCTTTTCAAACGAGTTGATCTGTAGAGATGAGGGATTGCACACAGACTTTGCTTGCCT 1034080 Query 125579 ACTGTTT 125585 | ||||| Sbjct 1034079 AATGTTT 1034073 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741059033261680