Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20parabailii_20[genbank_20GCA_5F001984395.2_202017 -03-16] 18 sequences; 20,864,403 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq14 105 5e-18 seq6 102 6e-17 seq13 98.7 7e-16 seq4 91.5 1e-13 seq10 82.4 6e-11 >seq14 Length=1283838 Score = 105 bits (116), Expect = 5e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 |||||||||||||||| || | ||| ||||| || || ||||| |||||||| || Sbjct 779424 CCACCTCTCAATCTTAGGACAAGATGCAGGGTTGACTCCTTTTGAATGTTGTAGTCAGAA 779365 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 ||| |||| | || || | || || || ||| | |||| | |||||||| ||| Sbjct 779364 AGAGTTCTTCCATCCTCCAGCTGCTTACCTGCGAAGATCAGTCTCTGTTGGTCAGGTGGG 779305 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 || |||||||| || || || ||||||| | || || || || | ||||| Sbjct 779304 ATACCTTCTTTATCCTGGATCTTCGACTTTACATTGTCGATAGTGTCAGAAGACTCTACC 779245 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || | ||||| || ||||| || || || || |||||||| |||||| Sbjct 779244 TCCAGCGTAATAGTCTTACCAGTAAGGGTCTTGACAAAAATCTGCATA 779197 >seq6 Length=1007293 Score = 102 bits (112), Expect = 6e-17 Identities = 154/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 |||||||||||||| || || || || | |||||| || ||||| |||||||| || Sbjct 101413 CCACCTCTCAATCTCAAGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCAGAC 101354 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 | | |||| | || || || || || |||||| | ||||| | || ||||| |||| Sbjct 101353 AAAGTTCTGCCATCCTCCAACTGCTTACCAGCGAAAATCAATCTCTGCTGGTCAGGTGGA 101294 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 || || || ||||| ||| || ||| ||| | || || || ||| ||| || Sbjct 101293 ATACCCTCCTTGTCTTGAATCTTAGACTTGACATTGTCAATAGTGTCGGAGGATTCGACC 101234 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAA 15355 || || || ||||| ||||| |||| ||| || || ||| Sbjct 101233 TCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACGAAA 101195 >seq13 Length=1315104 Score = 98.7 bits (108), Expect = 7e-16 Identities = 153/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 |||||||||||||| || || || || | |||||| || ||||| ||||| || || Sbjct 1189850 CCACCTCTCAATCTCAAGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTATAGTCAGAC 1189909 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 | | |||| | || || ||||| || |||||| | ||||| | || ||||| ||| Sbjct 1189910 AAAGTTCTGCCATCCTCCAATTGCTTACCAGCGAAAATCAATCTCTGCTGGTCAGGTGGG 1189969 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 || || || ||||| ||| || ||| || | || || || ||| | ||| || Sbjct 1189970 ATACCCTCCTTGTCTTGAATCTTAGACTTGACGTTGTCAATAGTGTCGGAAGATTCGACC 1190029 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAA 15355 || || || ||||| ||||| |||| ||| || || ||| Sbjct 1190030 TCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACGAAA 1190068 >seq4 Length=1091360 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 |||||||||||||| | || || || | ||||| || || || ||||| || || Sbjct 719718 CCACCTCTCAATCTAAGCACCAAGTGCAAAGTGGATTCCTTCTGGATGTTATAGTCAGAC 719777 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 | |||| | || || ||||| || |||||| | ||||| | || ||||| ||| Sbjct 719778 AACGTTCTGCCATCCTCCAATTGCTTACCAGCGAAGATCAATCTCTGCTGGTCAGGTGGG 719837 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 || ||||| ||||| ||| ||| ||| ||| | || || || || | || || Sbjct 719838 ATACCTTCCTTGTCTTGAATCTTGGACTTAACATTGTCGATAGTGTCAGAAGACTCGACT 719897 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15366 || | |||||| || ||||| |||| || || || ||||| ||||| || Sbjct 719898 TCGAGGGTAATAGTCTTACCCGTCAAGGTCTTGACGAAAATCTGCATCTT 719947 >seq10 Length=1751495 Score = 82.4 bits (90), Expect = 6e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 |||||||||||||| | || || || | ||| || || || || ||||| || || Sbjct 575190 CCACCTCTCAATCTAAGCACCAAGTGCAAGGTAGATTCCTTCTGAATGTTATAGTCAGAC 575249 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 | |||| | || || ||||| || ||||| | ||||| | || || || |||| Sbjct 575250 AAGGTTCTGCCATCCTCCAATTGCTTACCAGCAAAGATCAATCTCTGCTGATCAGGTGGA 575309 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 || ||||| ||||| ||| || ||| ||| | || || || || | || || Sbjct 575310 ATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCGATAGTGTCAGAAGACTCGACT 575369 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15366 || | |||||| || ||||| |||| || || || ||||| ||||| || Sbjct 575370 TCAAGGGTAATAGTCTTACCCGTCAAGGTCTTGACGAAAATCTGCATCTT 575419 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362179120546938