Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zygosaccharomyces_20parabailii_20[genbank_20GCA_5F001984395.2_202017
-03-16] 18 sequences; 20,864,403 total letters
Query= NC_004778.3
Length=129593
Score E
Sequences producing significant alignments: (Bits) Value
seq10 109 5e-19
seq14 89.7 4e-13
seq16 86.0 5e-12
seq9 86.0 5e-12
seq7 86.0 5e-12
>seq10
Length=1751495
Score = 109 bits (120), Expect = 5e-19
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 18815 CCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCC 18874
|| |||| ||| || | ||||| |||||| ||||| ||||| ||||| || || || | |
Sbjct 575190 CCACCTCTCAATCTAAGCACCAAGTGCAAGGTAGATTCCTTCTGAATGTTATAGTCAGAC 575249
Query 18875 ATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGC 18934
| ||| || | ||||||| || ||||| ||| | || | |||||||||||| ||
Sbjct 575250 AAGGTTCTGCCATCCTCCAATTGCTTACCAGCAAAGATCAATCTCTGCTGATCAGGTGGA 575309
Query 18935 ACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTT 18994
| || || ||||| ||| || || || | | ||| ||| || || ||| |
Sbjct 575310 ATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCGATAGTGTCAGAAGACTCGACT 575369
Query 18995 TCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCATTTT 19044
|| | |||||| || ||||| || || || ||||| ||||| ||||| ||
Sbjct 575370 TCAAGGGTAATAGTCTTACCCGTCAAGGTCTTGACGAAAATCTGCATCTT 575419
>seq14
Length=1283838
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 18815 CCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCC 18874
|| |||| || || || |||| ||||| ||||| || |||||||| ||||| || |
Sbjct 778968 CCACCTCTTAATCTCAAAACCAGGTGCAGGGTAGATTCTTTTTGAATGTTGTAGTCAGAA 778909
Query 18875 ATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGC 18934
| ||| | | ||||||||||| ||||| || | || |||||||| || || ||
Sbjct 778908 AGAGTTCTTCCATCCTCCAGCTGCTTACCTGCGAAGATCAGTCTCTGTTGGTCAGGTGGA 778849
Query 18935 ACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTT 18994
| || ||||| || || ||| ||||| | | ||| ||| || || |||
Sbjct 778848 ATACCTTCTTTATCCTGGATCTTCGACTTTACATTGTCGATAGTGTCAGAAGACTCTACC 778789
Query 18995 TCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041
|| | ||||| || ||||| || | || ||||||||||| |||||
Sbjct 778788 TCCAGCGTAATAGTCTTACCAGTAAGGGTCTTGACAAAAATCTGCAT 778742
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 18815 CCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCC 18874
|| |||| ||| |||| || | |||| || |||||||||||||| ||||| || |
Sbjct 779424 CCACCTCTCAATCTTAGGACAAGATGCAGGGTTGACTCCTTTTGAATGTTGTAGTCAGAA 779365
Query 18875 ATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGC 18934
| ||| | | ||||||||||| ||||| || | || |||||||| || || ||
Sbjct 779364 AGAGTTCTTCCATCCTCCAGCTGCTTACCTGCGAAGATCAGTCTCTGTTGGTCAGGTGGG 779305
Query 18935 ACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTT 18994
| || ||||| || || ||| ||||| | | ||| ||| || || |||
Sbjct 779304 ATACCTTCTTTATCCTGGATCTTCGACTTTACATTGTCGATAGTGTCAGAAGACTCTACC 779245
Query 18995 TCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041
|| | ||||| || ||||| || | || ||||||||||| |||||
Sbjct 779244 TCCAGCGTAATAGTCTTACCAGTAAGGGTCTTGACAAAAATCTGCAT 779198
>seq16
Length=1240939
Score = 86.0 bits (94), Expect = 5e-12
Identities = 100/133 (75%), Gaps = 4/133 (3%)
Strand=Plus/Plus
Query 21139 ACGTTGCCCAGATCGCCGACGTGCCGCTCTGCGGCGTCGGGAGCGCCGTGATTTTGGTGC 21198
|| |||||||| ||||||||||||| | | |||| || ||||| ||||| | | |||
Sbjct 605682 ACATTGCCCAGGTCGCCGACGTGCCTCACATCGGCCTCAGGAGCACCGTGTGTCT--TGC 605739
Query 21199 GTAGGG--TTAAAGTGCTCGCCGGCGGACGTGCAGCCGTTGCTGGTGTCGCCGAACTCGT 21256
||||| |||||||| ||||| || || || ||||| || |||| ||||||||||
Sbjct 605740 CTAGGGGGTTAAAGTGAGGACCGGCAGATGTACACCCGTTAGTGTTGTCACCGAACTCGT 605799
Query 21257 GAACGTGAAAGCC 21269
| | ||| || ||
Sbjct 605800 GGATGTGGAACCC 605812
>seq9
Length=2005801
Score = 86.0 bits (94), Expect = 5e-12
Identities = 148/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 18827 CTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCG 18886
|| || |||| ||||| || ||||| |||||||| || || || | | ||| | |
Sbjct 503091 CTCAAAACCAGATGCAAAGTTGACTCTTTTTGAATGTTATAGTCAGATAGAGTTCTTCCA 503150
Query 18887 TCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTG 18946
||||||||||| ||||| ||| | || | ||| || || || || | || |||||
Sbjct 503151 TCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCTTTA 503210
Query 18947 TCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATG 19006
|| || ||| ||||| | | ||| ||| || || |||| || | |||||
Sbjct 503211 TCTTGGATCTTCGACTTTACGTTGTCGATAGTGTCAGAAGACTCCACCTCTAATGTAATA 503270
Query 19007 GTTTTACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041
|| ||||| || || ||||| |||||||| |||||
Sbjct 503271 GTCTTACCGGTCAATGTTTTAACAAAAATCTGCAT 503305
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 18815 CCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCC 18874
|| |||| || || || || | ||| | || || |||||||| ||||||||||| |
Sbjct 503307 CCACCTCTTAATCTCAAAACGAGGTGTAGAGTTGATTCCTTTTGGATATTGTAATCAGAT 503366
Query 18875 ATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGC 18934
| ||| || | ||||||| ||| ||||| || | || | ||| |||||||| ||
Sbjct 503367 AAAGTTCTGCCATCCTCCAACTGCTTACCTGCGAAGATCAATCTTTGCTGATCAGGTGGG 503426
Query 18935 ACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCG-T 18993
| ||| ||||| || || ||| ||||| | | ||| ||| || ||| | ||
Sbjct 503427 ATGCCTTCTTTATCCTGGATCTTCGACTTTACGTTGTCGATAGTGTC-AGAGGATTCGAC 503485
Query 18994 TTCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041
|| | ||||| || ||||| || | ||| || |||||||| |||||
Sbjct 503486 CTCAAGTGTAATAGTCTTACCAGTAAGAGTCTTAACAAAAATCTGCAT 503533
>seq7
Length=858772
Score = 86.0 bits (94), Expect = 5e-12
Identities = 100/133 (75%), Gaps = 4/133 (3%)
Strand=Plus/Plus
Query 21139 ACGTTGCCCAGATCGCCGACGTGCCGCTCTGCGGCGTCGGGAGCGCCGTGATTTTGGTGC 21198
|| |||||||| || || ||||||| | | |||| || ||||| ||||| | | |||
Sbjct 581108 ACATTGCCCAGGTCACCAACGTGCCTCACATCGGCTTCAGGAGCACCGTGTGTCT--TGC 581165
Query 21199 GTAG--GGTTAAAGTGCTCGCCGGCGGACGTGCAGCCGTTGCTGGTGTCGCCGAACTCGT 21256
||| |||||||||| ||||| || ||||| ||||| || |||| ||||||||||
Sbjct 581166 CTAGAGGGTTAAAGTGAGGACCGGCAGATGTGCACCCGTTAGTGTTGTCACCGAACTCGT 581225
Query 21257 GAACGTGAAAGCC 21269
||| ||| || ||
Sbjct 581226 GAATGTGGAACCC 581238
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 414572709053092
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |