Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20parabailii_20[genbank_20GCA_5F001984395.2_202017 -03-16] 18 sequences; 20,864,403 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq10 109 5e-19 seq14 89.7 4e-13 seq16 86.0 5e-12 seq9 86.0 5e-12 seq7 86.0 5e-12 >seq10 Length=1751495 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 18815 CCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCC 18874 || |||| ||| || | ||||| |||||| ||||| ||||| ||||| || || || | | Sbjct 575190 CCACCTCTCAATCTAAGCACCAAGTGCAAGGTAGATTCCTTCTGAATGTTATAGTCAGAC 575249 Query 18875 ATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGC 18934 | ||| || | ||||||| || ||||| ||| | || | |||||||||||| || Sbjct 575250 AAGGTTCTGCCATCCTCCAATTGCTTACCAGCAAAGATCAATCTCTGCTGATCAGGTGGA 575309 Query 18935 ACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTT 18994 | || || ||||| ||| || || || | | ||| ||| || || ||| | Sbjct 575310 ATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCGATAGTGTCAGAAGACTCGACT 575369 Query 18995 TCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCATTTT 19044 || | |||||| || ||||| || || || ||||| ||||| ||||| || Sbjct 575370 TCAAGGGTAATAGTCTTACCCGTCAAGGTCTTGACGAAAATCTGCATCTT 575419 >seq14 Length=1283838 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 18815 CCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCC 18874 || |||| || || || |||| ||||| ||||| || |||||||| ||||| || | Sbjct 778968 CCACCTCTTAATCTCAAAACCAGGTGCAGGGTAGATTCTTTTTGAATGTTGTAGTCAGAA 778909 Query 18875 ATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGC 18934 | ||| | | ||||||||||| ||||| || | || |||||||| || || || Sbjct 778908 AGAGTTCTTCCATCCTCCAGCTGCTTACCTGCGAAGATCAGTCTCTGTTGGTCAGGTGGA 778849 Query 18935 ACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTT 18994 | || ||||| || || ||| ||||| | | ||| ||| || || ||| Sbjct 778848 ATACCTTCTTTATCCTGGATCTTCGACTTTACATTGTCGATAGTGTCAGAAGACTCTACC 778789 Query 18995 TCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041 || | ||||| || ||||| || | || ||||||||||| ||||| Sbjct 778788 TCCAGCGTAATAGTCTTACCAGTAAGGGTCTTGACAAAAATCTGCAT 778742 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 18815 CCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCC 18874 || |||| ||| |||| || | |||| || |||||||||||||| ||||| || | Sbjct 779424 CCACCTCTCAATCTTAGGACAAGATGCAGGGTTGACTCCTTTTGAATGTTGTAGTCAGAA 779365 Query 18875 ATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGC 18934 | ||| | | ||||||||||| ||||| || | || |||||||| || || || Sbjct 779364 AGAGTTCTTCCATCCTCCAGCTGCTTACCTGCGAAGATCAGTCTCTGTTGGTCAGGTGGG 779305 Query 18935 ACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTT 18994 | || ||||| || || ||| ||||| | | ||| ||| || || ||| Sbjct 779304 ATACCTTCTTTATCCTGGATCTTCGACTTTACATTGTCGATAGTGTCAGAAGACTCTACC 779245 Query 18995 TCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041 || | ||||| || ||||| || | || ||||||||||| ||||| Sbjct 779244 TCCAGCGTAATAGTCTTACCAGTAAGGGTCTTGACAAAAATCTGCAT 779198 >seq16 Length=1240939 Score = 86.0 bits (94), Expect = 5e-12 Identities = 100/133 (75%), Gaps = 4/133 (3%) Strand=Plus/Plus Query 21139 ACGTTGCCCAGATCGCCGACGTGCCGCTCTGCGGCGTCGGGAGCGCCGTGATTTTGGTGC 21198 || |||||||| ||||||||||||| | | |||| || ||||| ||||| | | ||| Sbjct 605682 ACATTGCCCAGGTCGCCGACGTGCCTCACATCGGCCTCAGGAGCACCGTGTGTCT--TGC 605739 Query 21199 GTAGGG--TTAAAGTGCTCGCCGGCGGACGTGCAGCCGTTGCTGGTGTCGCCGAACTCGT 21256 ||||| |||||||| ||||| || || || ||||| || |||| |||||||||| Sbjct 605740 CTAGGGGGTTAAAGTGAGGACCGGCAGATGTACACCCGTTAGTGTTGTCACCGAACTCGT 605799 Query 21257 GAACGTGAAAGCC 21269 | | ||| || || Sbjct 605800 GGATGTGGAACCC 605812 >seq9 Length=2005801 Score = 86.0 bits (94), Expect = 5e-12 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 18827 CTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCG 18886 || || |||| ||||| || ||||| |||||||| || || || | | ||| | | Sbjct 503091 CTCAAAACCAGATGCAAAGTTGACTCTTTTTGAATGTTATAGTCAGATAGAGTTCTTCCA 503150 Query 18887 TCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTG 18946 ||||||||||| ||||| ||| | || | ||| || || || || | || ||||| Sbjct 503151 TCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCTTTA 503210 Query 18947 TCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATG 19006 || || ||| ||||| | | ||| ||| || || |||| || | ||||| Sbjct 503211 TCTTGGATCTTCGACTTTACGTTGTCGATAGTGTCAGAAGACTCCACCTCTAATGTAATA 503270 Query 19007 GTTTTACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041 || ||||| || || ||||| |||||||| ||||| Sbjct 503271 GTCTTACCGGTCAATGTTTTAACAAAAATCTGCAT 503305 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 18815 CCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCC 18874 || |||| || || || || | ||| | || || |||||||| ||||||||||| | Sbjct 503307 CCACCTCTTAATCTCAAAACGAGGTGTAGAGTTGATTCCTTTTGGATATTGTAATCAGAT 503366 Query 18875 ATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGC 18934 | ||| || | ||||||| ||| ||||| || | || | ||| |||||||| || Sbjct 503367 AAAGTTCTGCCATCCTCCAACTGCTTACCTGCGAAGATCAATCTTTGCTGATCAGGTGGG 503426 Query 18935 ACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCG-T 18993 | ||| ||||| || || ||| ||||| | | ||| ||| || ||| | || Sbjct 503427 ATGCCTTCTTTATCCTGGATCTTCGACTTTACGTTGTCGATAGTGTC-AGAGGATTCGAC 503485 Query 18994 TTCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041 || | ||||| || ||||| || | ||| || |||||||| ||||| Sbjct 503486 CTCAAGTGTAATAGTCTTACCAGTAAGAGTCTTAACAAAAATCTGCAT 503533 >seq7 Length=858772 Score = 86.0 bits (94), Expect = 5e-12 Identities = 100/133 (75%), Gaps = 4/133 (3%) Strand=Plus/Plus Query 21139 ACGTTGCCCAGATCGCCGACGTGCCGCTCTGCGGCGTCGGGAGCGCCGTGATTTTGGTGC 21198 || |||||||| || || ||||||| | | |||| || ||||| ||||| | | ||| Sbjct 581108 ACATTGCCCAGGTCACCAACGTGCCTCACATCGGCTTCAGGAGCACCGTGTGTCT--TGC 581165 Query 21199 GTAG--GGTTAAAGTGCTCGCCGGCGGACGTGCAGCCGTTGCTGGTGTCGCCGAACTCGT 21256 ||| |||||||||| ||||| || ||||| ||||| || |||| |||||||||| Sbjct 581166 CTAGAGGGTTAAAGTGAGGACCGGCAGATGTGCACCCGTTAGTGTTGTCACCGAACTCGT 581225 Query 21257 GAACGTGAAAGCC 21269 ||| ||| || || Sbjct 581226 GAATGTGGAACCC 581238 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414572709053092