Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20parabailii_20[genbank_20GCA_5F001984395.2_202017 -03-16] 18 sequences; 20,864,403 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq14 116 2e-21 seq9 91.5 9e-14 >seq14 Length=1283838 Score = 116 bits (128), Expect = 2e-21 Identities = 173/243 (71%), Gaps = 7/243 (3%) Strand=Plus/Minus Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201 ||| |||||||| | ||| |||| ||||| || || |||||||| |||||||||||||| Sbjct 778741 ACCACCTCTTAATCTCAAAACCAGATGCAGGGTTGATTCTTTTTGGATATTGTAATCAGA 778682 Query 33202 CAAATTGAGTTGGTCATCC---AATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGT 33258 |||| | | | ||||| || || ||||| ||| ||||| | |||||| || | Sbjct 778681 CAAAGT---TCTGCCATCCTCTAACTGTTTTCCTGCAAAGATTAACCTTTGCTGATCAGG 778625 Query 33259 GGGTATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTG 33318 || || |||||||| || ||| | || || | | || ||||| || || Sbjct 778624 TGGGATACCTTCTTTATCTTGGATCTTCGACTTCACGTTGTCGATAGTGTCAGAGGATTC 778565 Query 33319 AACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCATGTTTAT-GG 33377 ||| || || || || || || || |||||||| || || ||||| ||||||| ||| || Sbjct 778564 AACCTCAAGTGTAATAGTCTTACCAGTAAGAGTCTTAACAAAAATCTGCATGTCTATCGG 778505 Query 33378 TTA 33380 ||| Sbjct 778504 TTA 778502 >seq9 Length=2005801 Score = 91.5 bits (100), Expect = 9e-14 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201 ||| ||||||| | ||| ||||| ||||| || ||||||||||| || || || ||||| Sbjct 502394 ACCACCTCTTAGTCTCAAAACCAAGTGCAAAGTTGACTCTTTTTGAATGTTATAGTCAGA 502453 Query 33202 CAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGG 33261 || | | | || |||| ||||| || ||| || || | ||| ||||| | || Sbjct 502454 CAGAGTTCTTCCATCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTGTTGGTCAGGTGG 502513 Query 33262 TATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAAC 33321 || |||||||| || ||| | ||||| | | || ||||| || || ||| Sbjct 502514 GATACCTTCTTTATCCTGGATCTTCGACTTTACGTTGTCGATAGTGTCAGAGGATTCAAC 502573 Query 33322 GTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 || || || || || || || |||||||| || || || || ||||| Sbjct 502574 CTCAAGTGTAATAGTCTTACCAGTAAGAGTCTTAACAAATATCTGCAT 502621 Score = 87.8 bits (96), Expect = 1e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201 ||| ||||||| | ||| |||| |||||| || ||||||||||| || || || ||||| Sbjct 502622 ACCACCTCTTAGTCTCAAAACCAGATGCAAAGTTGACTCTTTTTGAATGTTATAGTCAGA 502681 Query 33202 CAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGG 33261 | | | | || |||| ||||| || ||| || || | ||| ||||| | || Sbjct 502682 TAGAGTTCTTCCATCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTGTTGGTCAGGTGG 502741 Query 33262 TATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAAC 33321 || |||||||| || ||| | ||||| | | || ||||| || || ||| Sbjct 502742 GATACCTTCTTTATCCTGGATCTTCGACTTTACGTTGTCGATAGTGTCAGAGGATTCAAC 502801 Query 33322 GTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 || || || || || || || |||||||| || || || || ||||| Sbjct 502802 CTCAAGTGTAATAGTCTTACCAGTAAGAGTCTTAACAAATATCTGCAT 502849 Score = 87.8 bits (96), Expect = 1e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201 ||| ||||||| | ||| |||| |||||| || ||||||||||| || || || ||||| Sbjct 502850 ACCACCTCTTAGTCTCAAAACCAGATGCAAAGTTGACTCTTTTTGAATGTTATAGTCAGA 502909 Query 33202 CAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGG 33261 | | | | || |||| ||||| || ||| || || | ||| ||||| | || Sbjct 502910 TAGAGTTCTTCCATCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTGTTGGTCAGGTGG 502969 Query 33262 TATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAAC 33321 || |||||||| || ||| | ||||| | | || ||||| || || ||| Sbjct 502970 GATACCTTCTTTATCCTGGATCTTCGACTTTACGTTGTCGATAGTGTCAGAGGATTCAAC 503029 Query 33322 GTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 || || || || || || || |||||||| || || || || ||||| Sbjct 503030 CTCAAGTGTAATAGTCTTACCAGTAAGAGTCTTAACAAATATCTGCAT 503077 Score = 87.8 bits (96), Expect = 1e-12 Identities = 164/240 (68%), Gaps = 1/240 (0%) Strand=Plus/Plus Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201 ||| |||||||| | ||| || | || | || || || ||||| |||||||||||||| Sbjct 503306 ACCACCTCTTAATCTCAAAACGAGGTGTAGAGTTGATTCCTTTTGGATATTGTAATCAGA 503365 Query 33202 CAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGG 33261 ||| | || ||||| ||||| || || || || | |||||| || | || Sbjct 503366 TAAAGTTCTGCCATCCTCCAACTGCTTACCTGCGAAGATCAATCTTTGCTGATCAGGTGG 503425 Query 33262 TATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAAC 33321 ||||||||||| || ||| | ||||| | | || ||||| || || || Sbjct 503426 GATGCCTTCTTTATCCTGGATCTTCGACTTTACGTTGTCGATAGTGTCAGAGGATTCGAC 503485 Query 33322 GTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCATGTTTAT-GGTTA 33380 || || || || || || || |||||||| || || ||||| |||||| ||| ||||| Sbjct 503486 CTCAAGTGTAATAGTCTTACCAGTAAGAGTCTTAACAAAAATCTGCATGCCTATCGGTTA 503545 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318777530068164