Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20parabailii_20[genbank_20GCA_5F001984395.2_202017 -03-16] 18 sequences; 20,864,403 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value seq14 105 5e-18 seq9 100 2e-16 seq10 82.4 5e-11 >seq14 Length=1283838 Score = 105 bits (116), Expect = 5e-18 Identities = 164/232 (71%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATC-GT 43952 ||| ||||| ||||| || |||| ||| || || |||||||| ||||| ||||| | Sbjct 778741 ACCACCTCTTAATCTCAAAACCAGATGCAGGGTTGATTCTTTTTGGATATTGTAATCAGA 778682 Query 43953 TTAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAG 44012 || | || |||| || || |||||||||||||| || |||| |||||| || | | Sbjct 778681 CAAAGTTCTGC-CATCCTCTAACTGTTTTCCTGCAAAGATTAACCTTTGCTGATCAGGTG 778623 Query 44013 GTACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCA 44072 | | ||||||||||||| || || || || | | | ||| || | | || | Sbjct 778622 GGATACCTTCTTTATCTTGGATCTTCGACTTCACGTTGTCGATAGTGTCAGAGGATTCAA 778563 Query 44073 CATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCATGTC 44124 | || | ||||| || ||||| || | |||||| ||||| || |||||||| Sbjct 778562 CCTCAAGTGTAATAGTCTTACCAGTAAGAGTCTTAACAAAAATCTGCATGTC 778511 >seq9 Length=2005801 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 43892 CAACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCG 43951 ||||| ||||| ||||||| ||| | |||||| || |||||||||||| || || || Sbjct 502164 CAACCACCTCTTAATCTTAGCACAAGATGTAGGGTCGACTCTTTTTGAATGTTGTAGTCA 502223 Query 43952 TTTAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGA 44011 | | |||| |||| ||| || |||||||| ||||| | || ||||| | Sbjct 502224 GAAAGAGTTCTTCCATCCTCCAGTTGCTTACCTGCAAAGATCAATCTCTGTTGGTCGGGC 502283 Query 44012 GGTACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCC 44071 || | || || || || ||| || |||||| | ||| ||||| | | || Sbjct 502284 GGAATGCCCTCCTTGTCCTGAATCTTGGATTTGACATTGTCAATGGTATCAGAGGATTCA 502343 Query 44072 ACATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || |||| ||||| || |||||||| | |||||| |||||||| ||||| Sbjct 502344 ACTTCGAGTGTAATAGTCTTACCGGTAAGAGTCTTAACAAATATCTGCAT 502393 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTT 43953 ||| ||||| | ||| || |||| ||| | || |||||||||||| ||||| || Sbjct 503078 ACCACCTCTTAGTCTCAAAACCAGATGCAAAGTTGACTCTTTTTGAATGTTATAGTCAGA 503137 Query 43954 TAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013 || | |||| |||| || || |||||||| ||||| | ||| ||||| | || Sbjct 503138 TAGAGTTCTTCCATCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTGTTGGTCAGGTGG 503197 Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073 | ||||||||||||| || || || || | | | ||| || | | |||||| Sbjct 503198 GATACCTTCTTTATCTTGGATCTTCGACTTTACGTTGTCGATAGTGTCAGAAGACTCCAC 503257 Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || | ||||| || |||||||| || || || ||||| || ||||| Sbjct 503258 CTCTAATGTAATAGTCTTACCGGTCAATGTTTTAACAAAAATCTGCAT 503305 Score = 82.4 bits (90), Expect = 5e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTT 43953 ||| ||||| | ||| || |||| ||| | || |||||||||||| ||||| || Sbjct 502622 ACCACCTCTTAGTCTCAAAACCAGATGCAAAGTTGACTCTTTTTGAATGTTATAGTCAGA 502681 Query 43954 TAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013 || | |||| |||| || || |||||||| ||||| | ||| ||||| | || Sbjct 502682 TAGAGTTCTTCCATCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTGTTGGTCAGGTGG 502741 Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073 | |||||||||||| || || || || | | | ||| || | | || || Sbjct 502742 GATACCTTCTTTATCCTGGATCTTCGACTTTACGTTGTCGATAGTGTCAGAGGATTCAAC 502801 Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || | ||||| || ||||| || | |||||| |||||||| ||||| Sbjct 502802 CTCAAGTGTAATAGTCTTACCAGTAAGAGTCTTAACAAATATCTGCAT 502849 Score = 82.4 bits (90), Expect = 5e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTT 43953 ||| ||||| | ||| || |||| ||| | || |||||||||||| ||||| || Sbjct 502850 ACCACCTCTTAGTCTCAAAACCAGATGCAAAGTTGACTCTTTTTGAATGTTATAGTCAGA 502909 Query 43954 TAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013 || | |||| |||| || || |||||||| ||||| | ||| ||||| | || Sbjct 502910 TAGAGTTCTTCCATCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTGTTGGTCAGGTGG 502969 Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073 | |||||||||||| || || || || | | | ||| || | | || || Sbjct 502970 GATACCTTCTTTATCCTGGATCTTCGACTTTACGTTGTCGATAGTGTCAGAGGATTCAAC 503029 Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || | ||||| || ||||| || | |||||| |||||||| ||||| Sbjct 503030 CTCAAGTGTAATAGTCTTACCAGTAAGAGTCTTAACAAATATCTGCAT 503077 >seq10 Length=1751495 Score = 82.4 bits (90), Expect = 5e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTT 43953 ||| ||||||||||| | |||||| || | || || || ||||| ||||| || Sbjct 575189 ACCACCTCTCAATCTAAGCACCAAGTGCAAGGTAGATTCCTTCTGAATGTTATAGTCAGA 575248 Query 43954 TAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013 || | |||| |||||||| || || ||||| ||||| | ||||| || | || Sbjct 575249 CAAGGTTCTGCCATCCTCCAATTGCTTACCAGCAAAGATCAATCTCTGCTGATCAGGTGG 575308 Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073 | |||||| || ||| ||| ||| ||||| | | | ||| || | | ||| || Sbjct 575309 AATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCGATAGTGTCAGAAGACTCGAC 575368 Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || | ||||| || ||||| || || ||||| || || || ||||| Sbjct 575369 TTCAAGGGTAATAGTCTTACCCGTCAAGGTCTTGACGAAAATCTGCAT 575416 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354777522170664