Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20parabailii_20[genbank_20GCA_5F001984395.2_202017 -03-16] 18 sequences; 20,864,403 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq12 233 2e-56 seq1 223 3e-53 >seq12 Length=1443312 Score = 233 bits (258), Expect = 2e-56 Identities = 568/850 (67%), Gaps = 19/850 (2%) Strand=Plus/Plus Query 12839 TTATTTGACATAACAGACATTTTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTT 12898 || |||| ||||||| ||||| || || ||| || |||||||| ||||| ||| Sbjct 767366 TTCTTTGCCATAACACCAGCCTTTTGGTAATCCGAAACCCTCTTTTCAAAGAAGTTAGTT 767425 Query 12899 TTTCCTTCTAACGAAATATTTTCCATAAAATCGAAAGGATTTTTCGAACAAT--AGTATT 12956 |||||| | | |||||||||||||||||| || || ||||| | |||| | |||||| Sbjct 767426 TTTCCTGCCAGCGAAATATTTTCCATAAAGTCAAACGGATTAGT--AACATTGAAGTATT 767483 Query 12957 TTTTACACCCTAATTCTAGTAACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTA 13016 | || ||| | | | | || ||||| || |||||||| | |||||| ||||| | Sbjct 767484 TCTTGTTCCCAAGAGCGACCAGCAGCCTGTCTGCTACAAACTCAACGTACTGATTCATCA 767543 Query 13017 AATCACAGTTCATTCCTATTAATTTTACAGGCATAGCTTCTGTTAAAAAGtttttttCTA 13076 | ||||| || | | || || | || || | ||| | |||| || | Sbjct 767544 GCGCGGCATTCATGCCCAGCAGAGCCACGGGGAGCGCGTCGATGAAATACCTTTTCTCGA 767603 Query 13077 TATCAACTGCTTCGATAACTATGTCTCTTATTACGTTCTCTAAT-GGAGGATTTGATAGA 13135 | || || ||||| ||| || || | | || || | || ||| |||| Sbjct 767604 TCTCGACAGCTTCTGTAATGATC-CTTTCAATAATATCAGGATCAGGCTTGTTTCTTAGA 767662 Query 13136 TGCTTAAACATCATACATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCG 13195 || |||||| | ||| ||||| || |||||||||||||||||||| |||| |||| Sbjct 767663 TGGGAAAACATTAGACAAGCAAAGTCTGTGTGCAATCCTTCATCTCTACAGATTAACTCG 767722 Query 13196 TTTGAAAATGTTAGACCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAAC 13255 |||||||| || || || ||||| || || ||||| | |||||| || || ||||| Sbjct 767723 TTTGAAAAGGTCAGGCCTGGCATGAGGCCCTTCTTTTTGAGCCAAAAGATGGCGGCAAAA 767782 Query 13256 GAACCCGaaaaaaaTATTCCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATACGTA 13315 || ||||| ||||| || ||||| ||||| ||||| || | || ||| ||| | || | Sbjct 767783 GATCCCGAGAAAAAGATACCTTCTACTGCGGCAAATGCCACCAGCCTCTCAGCGTAAAGA 767842 Query 13316 CTATTTTTACTCTCTATCCACTTTCTGGCCCAGTTTG-CTTTTTGTTTAACGCAGTTCAT 13374 ||| | | | |||||| | | ||||| | | ||||| || | | || || Sbjct 767843 GCATTGTCATCTTGAATCCACCTGATAGCCCACTCAGCCTTTTCCTTGATCTGAG-GGAT 767901 Query 13375 ATTTTCTATTGCGTTAAATAAATAAtttttttCCTTACTGTCTAAAATATAAGTATCTAT 13434 | || || || ||||| || ||| ||||||| || || || || || || Sbjct 767902 GTGCTCAATCGCATTAAACAAGAAATCCCGTTCCTTAGGATCCTTGATGTATGTCTCGAT 767961 Query 13435 CAATAAGCTATACATTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACA 13494 ||||| || | || ||||| |||||||||||| || ||||| || || ||||| Sbjct 767962 TAATAATGAGTAAGTCTCCGAATGGATATTTTCCATCATGATCTGGAACCCGTAGAAACA 768021 Query 13495 TCTAGCCTCTGATACCTGAACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTAT 13554 | | ||||||| || |||||| || | | |||| | || |||| || || || || || Sbjct 768022 TTTGGCCTCTGGTATCTGAACCTCTGCGGAAAAATTCTCAACTAAATTCTCATTGACAAT 768081 Query 13555 CCCGTCACTAGCAGCaaaaaaaGCAAGTATGTGCT-TA---ATAAAttttttttCGTTTT 13610 |||||| || ||||| ||||| || | || || ||||| | | ||| || Sbjct 768082 TCCGTCAGATGCCGCAAAGAAAGCTAGGA----CTCTAGACATAAAGAATCTCTCGCCTT 768137 Query 13611 CTGACAAC---TTTAACCAATCTGGAAAATCTTTTGATAAATCTACCTCCTCAACGGTCC 13667 ||| || | ||| |||||| | |||||| || | || | |||||| | |||| Sbjct 768138 CTGTCATCCTATTTTCCCAATCATTTATATCTTTCGACAGGTCAATCTCCTCTGCAGTCC 768197 Query 13668 AAAAAGAAGC 13677 | ||||| || Sbjct 768198 AGAAAGATGC 768207 >seq1 Length=2110500 Score = 223 bits (246), Expect = 3e-53 Identities = 503/748 (67%), Gaps = 10/748 (1%) Strand=Plus/Plus Query 12839 TTATTTGACATAACAGACATTTTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTT 12898 || |||| ||||||| ||||| || || ||| || || ||||| ||||| ||| Sbjct 1033771 TTCTTTGCCATAACACCAGCCTTTTGGTAATCCGAAACCCTCTTCTCAAAGAAGTTAGTT 1033830 Query 12899 TTTCCTTCTAACGAAATATTTTCCATAAAATCGAAAGGATTTTTCGAACAAT--AGTATT 12956 |||||| | | ||||||||| ||||||||||| || ||||| | |||| | |||||| Sbjct 1033831 TTTCCTGCCAGCGAAATATTCTCCATAAAATCAAACGGATTAGT--AACATTGAAGTATT 1033888 Query 12957 TTTTACACCCTAATTCTAGTAACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTA 13016 | || ||| | | | | || ||||| || |||||||| | |||||| ||||| | Sbjct 1033889 TCTTGTTCCCCAGAGCGACCAGCAGCCTGTCTGCTACAAACTCAACGTACTGATTCATCA 1033948 Query 13017 AATCACAGTTCATTCCTATTAATTTTACAGGCATAGCTTCTGTTAAAAAGtttttttCTA 13076 | ||||| || | | || || | || || | ||| | |||| || | Sbjct 1033949 GCGCGGCATTCATGCCCAGCAGAGCCACGGGGAGTGCGTCAATGAAATATCTTTTCTCGA 1034008 Query 13077 TATCAACTGCTTCGATAACTATGTCTCTTATTACGTTCTC--TAATGGAGGATTTGATAG 13134 | || || ||||| ||| || || | | || || | | | | || ||| Sbjct 1034009 TCTCGACAGCTTCTGTAATAATC-CTTTCAATAATATCCGGGTCAGGCTTG-TTCCTTAG 1034066 Query 13135 ATGCTTAAACATCATACATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTC 13194 ||| |||||| | || ||||| || ||||||||| |||||||||| || | ||| Sbjct 1034067 ATGGGAAAACATTAGGCAAGCAAAGTCTGTGTGCAATCCCTCATCTCTACAGATCAACTC 1034126 Query 13195 GTTTGAAAATGTTAGACCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAA 13254 ||||||||| || || || ||||| || ||| ||||| | |||||| || || ||||| Sbjct 1034127 GTTTGAAAAGGTCAGGCCAGGCATGAGACCTTTCTTTTTGAGCCAAAAGATTGCGGCAAA 1034186 Query 13255 CGAACCCGaaaaaaaTATTCCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATACGT 13314 ||| ||||| ||||| || ||||| ||||| ||||| || | |||||| ||| | || Sbjct 1034187 CGACCCCGAGAAAAAGATACCTTCTACTGCGGCAAATGCCACCAACCTCTCAGCGTAAAG 1034246 Query 13315 ACTATTTTTACTCTCTATCCACTTTCTGGCCCAGTTTG-CTTTTTGTTTAACGCAGTTCA 13373 | ||| | | | |||||| | ||||||| | | ||||| || | | || | Sbjct 1034247 AGCATTGTCATCTTGAATCCACCTGATGGCCCACTCAGCCTTTTCCTTGATCTGAG-GGA 1034305 Query 13374 TATTTTCTATTGCGTTAAATAAATAAtttttttCCTTACTGTCTAAAATATAAGTATCTA 13433 | | ||| || || ||||| || ||| ||||||| || || || || || | Sbjct 1034306 TGTGTTCAATGGCATTAAACAAGAAATCCCGTTCCTTAGGATCCTTGATGTATGTCTCGA 1034365 Query 13434 TCAATAAGCTATACATTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAAC 13493 | | ||| || | || ||||| |||||||||||| || || || || || |||| Sbjct 1034366 TAAGTAATGAGTAAGTCTCCGAATGGATATTTTCCATCATGATCTGAAACCCGTAGAAAC 1034425 Query 13494 ATCTAGCCTCTGATACCTGAACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTA 13553 || | ||||||| || ||||| || | | |||| | || ||||||| || || || | Sbjct 1034426 ATTTGGCCTCTGGTATTTGAACCTCTGCGGAAAAATTCTCAACTAAGTTCTCATTGACAA 1034485 Query 13554 TCCCGTCACTAGCAGCaaaaaaaGCAAG 13581 | |||||| || ||||| ||||| || Sbjct 1034486 TTCCGTCAGATGCGGCAAAGAAAGCTAG 1034513 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430982305453236