Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20parabailii_20[genbank_20GCA_5F001984395.2_202017 -03-16] 18 sequences; 20,864,403 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq10 147 3e-30 seq4 134 2e-26 seq11 98.7 1e-15 seq3 93.3 5e-14 >seq10 Length=1751495 Score = 147 bits (162), Expect = 3e-30 Identities = 304/449 (68%), Gaps = 29/449 (6%) Strand=Plus/Plus Query 6806 TTAATTGTTCTTTTATAGCTTTTATATGATCTAAATAAATATGAGCATCTCCTAGCGTAT 6865 ||| |||||| || | || | || ||||| || | ||| || || || | || | Sbjct 1649241 TTAGTTGTTCCTTCAAGGCATCTACGTGATCCTTGTACACATGCGCGTCACCCATAGTGT 1649300 Query 6866 GAATAAATTCACCTGGTTTCATATCAACAG-CTTGAGCAATTAAATATGTTAATAATGCA 6924 |||||||||| ||||| | ||| ||| ||| | ||||| || | || ||||| || Sbjct 1649301 GAATAAATTCGCCTGGCTCCATGTCA-CAGACATGAGCTATCATTCGGGTCAATAAAGCG 1649359 Query 6925 TAAGAAGCTACATTAAAAGGTACACCTAATCCCATATCTGCTGATCTTTGATAACATTGA 6984 ||||| || | |||||| || || |||| |||||| || |||||||||||| | | Sbjct 1649360 TAAGATGCAATATTAAATGGGACGCCTAGTCCCATGTCGCATGATCTTTGATA----TAA 1649415 Query 6985 CAAG-ATAAAATATT--GTCTA----------------TAGCATAAAATTGACACAATAC 7025 |||| || ||| || || | || |||||||||| | || || Sbjct 1649416 CAAGCATGAAAGTTTTGGTTTCCCTTCCTTTGGGAAGCTAACATAAAATTGTGAAAACAC 1649475 Query 7026 ATGACATGGAGGTAAAACAGCCTGATCT--ATATCAGATGGATTCCAAGCAGTCATTAAA 7083 ||| ||||| || || | | ||| | | ||| | |||||||||||| |||| | | Sbjct 1649476 ATGGCATGGCGGCAATGC--CATGAGCGGAAAATCTGGTGGATTCCAAGCGCTCATAATA 1649533 Query 7084 ATACGTCTATCATTTGGATTTGTTTTTAATTTTGTTATAATTATTTGTAATTGATCTATA 7143 || || ||||||| ||||| ||||| ||||| || | ||| | |||||| | | Sbjct 1649534 ATTCGCCTATCATAAGGATTCGTTTTCAATTTGTGAATCACATCTTGCAGTTGATCAAAA 1649593 Query 7144 CCCTGACCTTCATAATTAGTATGACAATTTATATAATTAGCTCCAAAATGTCTCCATTGA 7203 || || ||| ||||| | |||| | | || || || || || ||||||||||| Sbjct 1649594 CCATGCCCTGTATAATCGTCGTCACAAGTCTTGTATTTTGCACCGAAGTGTCTCCATTGG 1649653 Query 7204 AACCCATAAATAGGACCTAAATCACCTTC 7232 |||||||||| || |||||||||||||| Sbjct 1649654 AACCCATAAACGGGTCCTAAATCACCTTC 1649682 >seq4 Length=1091360 Score = 134 bits (148), Expect = 2e-26 Identities = 299/447 (67%), Gaps = 25/447 (6%) Strand=Plus/Minus Query 6806 TTAATTGTTCTTTTATAGCTTTTATATGATCTAAATAAATATGAGCATCTCCTAGCGTAT 6865 ||| |||||| || | || | | |||||| || | ||| ||||| || | || | Sbjct 134304 TTAGTTGTTCCTTCAACGCATCCACATGATCCTTGTACACATGCGCATCACCCATAGTGT 134245 Query 6866 GAATAAATTCACCTGGTTTCATATCAACAG-CTTGAGCAATTAAATATGTTAATAATGCA 6924 | |||||||| ||||| | ||| || ||| | ||||| || | || ||||| || Sbjct 134244 GGATAAATTCGCCTGGCTCCATGCCA-CAGACATGAGCTATCATTCGGGTCAATAAAGCG 134186 Query 6925 TAAGAAGCTACATTAAAAGGTACACCTAATCCCATATCTGCTGATCTTTGATAACATTGA 6984 ||||| || | |||||| || || |||| |||||| || |||||||||||| | | Sbjct 134185 TAAGATGCAATATTAAATGGGACGCCTAGTCCCATGTCGCATGATCTTTGATA----TAA 134130 Query 6985 CAAG-ATAAAATATT--GTCTA----------------TAGCATAAAATTGACACAATAC 7025 |||| || ||| || || | || |||||||||| | ||||| Sbjct 134129 CAAGCATGAAAGTTTTGGTTTCCCTTCCTTTGGGAAGCTAACATAAAATTGTGAAAATAC 134070 Query 7026 ATGACATGGAGGTAAAACAGCCTGATCTATATCAGATGGATTCCAAGCAGTCATTAAAAT 7085 ||| || || || || | || | ||| | |||||||||||| |||| | ||| Sbjct 134069 ATGGCAAGGCGGCAATGCCATGAGAGGAAAATCTGGTGGATTCCAAGCGCTCATAATAAT 134010 Query 7086 ACGTCTATCATTTGGATTTGTTTTTAATTTTGTTATAATTATTTGTAATTGATCTATACC 7145 || | ||||| ||||| ||||| ||||| || | ||| | |||||| | ||| Sbjct 134009 TCGCCGATCATAAGGATTCGTTTTCAATTTATGAATCACATCTTGCAGTTGATCAAAACC 133950 Query 7146 CTGACCTTCATAATTAGTATGACAATTTATATAATTAGCTCCAAAATGTCTCCATTGAAA 7205 || ||| ||||| | |||| | | || || || || || ||||||||||| || Sbjct 133949 GTGCCCTGTATAATCGTCGTCACAAGTCTTGTATTTTGCACCGAAGTGTCTCCATTGGAA 133890 Query 7206 CCCATAAATAGGACCTAAATCACCTTC 7232 |||||||| || |||||||||||||| Sbjct 133889 CCCATAAACGGGTCCTAAATCACCTTC 133863 >seq11 Length=1516135 Score = 98.7 bits (108), Expect = 1e-15 Identities = 113/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 19352 AAAATACCTGAAATAGGTGATAAGTTTGCTTCTTTTACTGCTCAAAAAGGCACATGTGGT 19411 || || ||| |||| ||||| || ||||| ||| | || || ||||| || |||| Sbjct 1097045 AAGATTCCTCAAATTGGTGACAAATTTGCCTCTCGTCATGGCCAGAAAGGTACTATTGGT 1096986 Query 19412 ATGATTTATCGTCAAGAAGATATGCCTTTTACTAAAGATGGTATAGTGCCGGATCTTATT 19471 || | |||| | ||||||||||||||| || ||| ||||| || || ||||| || Sbjct 1096985 ATCACTTATAGCAGAGAAGATATGCCTTTCACAGCAGAAGGTATTGTTCCTGATCTAATC 1096926 Query 19472 ATTAACCCACATGCTTTTCCAAGTCGAATGAC 19503 |||||||||||||| ||||| ||| ||||| Sbjct 1096925 ATTAACCCACATGCCATTCCATCTCGTATGAC 1096894 >seq3 Length=1115933 Score = 93.3 bits (102), Expect = 5e-14 Identities = 115/155 (74%), Gaps = 2/155 (1%) Strand=Plus/Minus Query 19350 CTAAAATACCTGAAATAGGTGATAAGTTTGCTTCTTTT-ACTGCTCAAAAAGGCACATGT 19408 |||| || ||| |||| ||||| || ||||| ||| | || || |||||||| || | Sbjct 535555 CTAAGATTCCTCAAATTGGTGACAAATTTGCCTCTCGTCACGGC-CAAAAAGGTACTATT 535497 Query 19409 GGTATGATTTATCGTCAAGAAGATATGCCTTTTACTAAAGATGGTATAGTGCCGGATCTT 19468 ||||| | |||| | ||||||||||||||| || ||| ||||| || || ||||| Sbjct 535496 GGTATCACTTATAGCAGAGAAGATATGCCTTTCACAGCAGAAGGTATTGTTCCTGATCTA 535437 Query 19469 ATTATTAACCCACATGCTTTTCCAAGTCGAATGAC 19503 || ||||| |||||||| | ||| || ||||| Sbjct 535436 ATCATTAATCCACATGCCATCCCATCGCGTATGAC 535402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595871865928800