Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20parabailii_20[genbank_20GCA_5F001984395.2_202017 -03-16] 18 sequences; 20,864,403 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq14 156 4e-33 seq9 152 5e-32 seq10 149 6e-31 seq6 132 4e-26 seq13 127 2e-24 seq4 122 8e-23 >seq14 Length=1283838 Score = 156 bits (172), Expect = 4e-33 Identities = 179/241 (74%), Gaps = 0/241 (0%) Strand=Plus/Minus Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827 |||| | | || || ||||| |||| ||| |||| |||| || ||||| ||||| | Sbjct 778753 AAAAATCTGCATACCACCTCTTAATCTCAAAACCAGATGCAGGGTTGATTCTTTTTGGAT 778694 Query 94828 GTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTG 94887 || ||||| || ||| || |||||| | ||||||||| |||||||||| ||||| Sbjct 778693 ATTGTAATCAGACAAAGTTCTGCCATCCTCTAACTGTTTTCCTGCAAAGATTAACCTTTG 778634 Query 94888 CTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTC 94947 |||||| || || ||||||||||| || | || || | ||| ||| | ||| |||||| Sbjct 778633 CTGATCAGGTGGGATACCTTCTTTATCTTGGATCTTCGACTTCACGTTGTCGATAGTGTC 778574 Query 94948 AGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || | || || |||| || || || || ||||||||||| || ||||| |||||||| Sbjct 778573 AGAGGATTCAACCTCAAGTGTAATAGTCTTACCAGTAAGAGTCTTAACAAAAATCTGCAT 778514 Query 95008 G 95008 | Sbjct 778513 G 778513 Score = 140 bits (154), Expect = 3e-28 Identities = 175/240 (73%), Gaps = 0/240 (0%) Strand=Plus/Minus Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827 |||| | | || || ||||| |||| ||| |||| ||||| |||||||| ||||| | Sbjct 779209 AAAAATCTGCATACCACCTCTTAATCTCAAAACCAGGTGCAGGGTAGATTCTTTTTGAAT 779150 Query 94828 GTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTG 94887 |||||| || | ||| | |||||||||||| || || ||||||| ||||| || Sbjct 779149 GTTATAGTCAGAAAGAGTTCTTCCATCCTCCAGCTGCTTACCAGCAAAGATCAATCTCTG 779090 Query 94888 CTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTC 94947 || || || ||||| || || ||||| | ||| || | ||| ||| | ||| ||||| Sbjct 779089 TTGGTCGGGCGGAATGCCCTCCTTGTCCTGAATCTTCGACTTCACGTTGTCGATTGTGTC 779030 Query 94948 AGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || | || || |||| || || || || ||||||||||| || ||||| |||||||| Sbjct 779029 AGAGGATTCAACCTCAAGTGTTATAGTCTTACCAGTAAGAGTCTTAACAAAAATCTGCAT 778970 Score = 122 bits (134), Expect = 8e-23 Identities = 171/240 (71%), Gaps = 0/240 (0%) Strand=Plus/Minus Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827 |||| | | || || ||||| |||| ||| |||| ||||| |||||||| ||||| | Sbjct 778981 AAAAATCTGCATACCACCTCTTAATCTCAAAACCAGGTGCAGGGTAGATTCTTTTTGAAT 778922 Query 94828 GTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTG 94887 ||| || || | ||| | |||||||||||| || || | ||||| | ||| || Sbjct 778921 GTTGTAGTCAGAAAGAGTTCTTCCATCCTCCAGCTGCTTACCTGCGAAGATCAGTCTCTG 778862 Query 94888 CTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTC 94947 || || || |||||||||||||| || | || || | ||| || | ||| |||||| Sbjct 778861 TTGGTCAGGTGGAATACCTTCTTTATCCTGGATCTTCGACTTTACATTGTCGATAGTGTC 778802 Query 94948 AGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || || | ||| || || || |||||||| || || ||||| |||||||| Sbjct 778801 AGAAGACTCTACCTCCAGCGTAATAGTCTTACCAGTAAGGGTCTTGACAAAAATCTGCAT 778742 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || |||||||||| | || | |||| || || |||||||| | ||| || || Sbjct 779424 CCACCTCTCAATCTTAGGACAAGATGCAGGGTTGACTCCTTTTGAATGTTGTAGTCAGAA 779365 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | ||| | |||||||||||| || || | ||||| | ||| || || || || || Sbjct 779364 AGAGTTCTTCCATCCTCCAGCTGCTTACCTGCGAAGATCAGTCTCTGTTGGTCAGGTGGG 779305 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 ||||||||||| || | || || | ||| || | ||| |||||||| || || Sbjct 779304 ATACCTTCTTTATCCTGGATCTTCGACTTTACATTGTCGATAGTGTCAGAAGACTCTACC 779245 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || | ||| || || || |||||||| || || ||||| |||||||| Sbjct 779244 TCCAGCGTAATAGTCTTACCAGTAAGGGTCTTGACAAAAATCTGCAT 779198 >seq9 Length=2005801 Score = 152 bits (168), Expect = 5e-32 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || ||||| | || ||| |||||||||||||| || || ||||| | |||||| || | Sbjct 502395 CCACCTCTTAGTCTCAAAACCAAGTGCAAAGTTGACTCTTTTTGAATGTTATAGTCAGAC 502454 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | ||| | |||||||||||| || || ||||||| |||||||| || || || || Sbjct 502455 AGAGTTCTTCCATCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTGTTGGTCAGGTGGG 502514 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 ||||||||||| || | || || | ||| ||| | ||| |||||||| | || || Sbjct 502515 ATACCTTCTTTATCCTGGATCTTCGACTTTACGTTGTCGATAGTGTCAGAGGATTCAACC 502574 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 |||| || || || || ||||||||||| || ||||| |||||||| Sbjct 502575 TCAAGTGTAATAGTCTTACCAGTAAGAGTCTTAACAAATATCTGCAT 502621 Score = 149 bits (164), Expect = 6e-31 Identities = 180/245 (73%), Gaps = 0/245 (0%) Strand=Plus/Plus Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827 |||| | | || || ||||| |||| ||| || | ||| | ||| ||||||||||| | Sbjct 503294 AAAAATCTGCATACCACCTCTTAATCTCAAAACGAGGTGTAGAGTTGATTCCTTTTGGAT 503353 Query 94828 GTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTG 94887 || ||||| | ||| || |||||||| ||| || || | ||||| |||||||| Sbjct 503354 ATTGTAATCAGATAAAGTTCTGCCATCCTCCAACTGCTTACCTGCGAAGATCAATCTTTG 503413 Query 94888 CTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTC 94947 |||||| || || || |||||||| || | || || | ||| ||| | ||| |||||| Sbjct 503414 CTGATCAGGTGGGATGCCTTCTTTATCCTGGATCTTCGACTTTACGTTGTCGATAGTGTC 503473 Query 94948 AGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || | ||||| |||| || || || || ||||||||||| || ||||| |||||||| Sbjct 503474 AGAGGATTCGACCTCAAGTGTAATAGTCTTACCAGTAAGAGTCTTAACAAAAATCTGCAT 503533 Query 95008 GCTTA 95012 || || Sbjct 503534 GCCTA 503538 Score = 140 bits (154), Expect = 3e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || ||||| | || ||| |||| |||||||| || || ||||| | |||||| || Sbjct 502623 CCACCTCTTAGTCTCAAAACCAGATGCAAAGTTGACTCTTTTTGAATGTTATAGTCAGAT 502682 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | ||| | |||||||||||| || || ||||||| |||||||| || || || || Sbjct 502683 AGAGTTCTTCCATCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTGTTGGTCAGGTGGG 502742 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 ||||||||||| || | || || | ||| ||| | ||| |||||||| | || || Sbjct 502743 ATACCTTCTTTATCCTGGATCTTCGACTTTACGTTGTCGATAGTGTCAGAGGATTCAACC 502802 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 |||| || || || || ||||||||||| || ||||| |||||||| Sbjct 502803 TCAAGTGTAATAGTCTTACCAGTAAGAGTCTTAACAAATATCTGCAT 502849 Score = 140 bits (154), Expect = 3e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || ||||| | || ||| |||| |||||||| || || ||||| | |||||| || Sbjct 502851 CCACCTCTTAGTCTCAAAACCAGATGCAAAGTTGACTCTTTTTGAATGTTATAGTCAGAT 502910 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | ||| | |||||||||||| || || ||||||| |||||||| || || || || Sbjct 502911 AGAGTTCTTCCATCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTGTTGGTCAGGTGGG 502970 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 ||||||||||| || | || || | ||| ||| | ||| |||||||| | || || Sbjct 502971 ATACCTTCTTTATCCTGGATCTTCGACTTTACGTTGTCGATAGTGTCAGAGGATTCAACC 503030 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 |||| || || || || ||||||||||| || ||||| |||||||| Sbjct 503031 TCAAGTGTAATAGTCTTACCAGTAAGAGTCTTAACAAATATCTGCAT 503077 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || ||||| | || ||| |||| |||||||| || || ||||| | |||||| || Sbjct 503079 CCACCTCTTAGTCTCAAAACCAGATGCAAAGTTGACTCTTTTTGAATGTTATAGTCAGAT 503138 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | ||| | |||||||||||| || || ||||||| |||||||| || || || || Sbjct 503139 AGAGTTCTTCCATCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTGTTGGTCAGGTGGG 503198 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 ||||||||||| || | || || | ||| ||| | ||| |||||||| || || Sbjct 503199 ATACCTTCTTTATCTTGGATCTTCGACTTTACGTTGTCGATAGTGTCAGAAGACTCCACC 503258 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || | || || || || || || | ||||| ||||| |||||||| Sbjct 503259 TCTAATGTAATAGTCTTACCGGTCAATGTTTTAACAAAAATCTGCAT 503305 >seq10 Length=1751495 Score = 149 bits (164), Expect = 6e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || |||||||||| | |||||||||||| ||||||||||| || | |||||| || | Sbjct 575190 CCACCTCTCAATCTAAGCACCAAGTGCAAGGTAGATTCCTTCTGAATGTTATAGTCAGAC 575249 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | || || |||||||| || || || ||||||| ||||| |||||||| || ||| Sbjct 575250 AAGGTTCTGCCATCCTCCAATTGCTTACCAGCAAAGATCAATCTCTGCTGATCAGGTGGA 575309 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 |||||||| ||||| | ||| |||| |||||| | ||| |||||||| ||||| Sbjct 575310 ATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCGATAGTGTCAGAAGACTCGACT 575369 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 |||| || || || || || || | || || || || |||||||| Sbjct 575370 TCAAGGGTAATAGTCTTACCCGTCAAGGTCTTGACGAAAATCTGCAT 575416 >seq6 Length=1007293 Score = 132 bits (146), Expect = 4e-26 Identities = 160/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || |||||||||| ||| ||||||||||| || ||||||||||| | ||| || || | Sbjct 101413 CCACCTCTCAATCTCAAGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCAGAC 101354 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | ||| || |||||||| ||| || || | || || ||||| ||||| || || ||| Sbjct 101353 AAAGTTCTGCCATCCTCCAACTGCTTACCAGCGAAAATCAATCTCTGCTGGTCAGGTGGA 101294 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 ||||| || ||||| | ||| || | |||||| | | | |||||| | | ||||| Sbjct 101293 ATACCCTCCTTGTCTTGAATCTTAGACTTGACATTGTCAATAGTGTCGGAGGATTCGACC 101234 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAA 94998 || | |||||||| || ||||| | ||| || || || Sbjct 101233 TCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACGAA 101196 >seq13 Length=1315104 Score = 127 bits (140), Expect = 2e-24 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || |||||||||| ||| ||||||||||| || ||||||||||| | |||||| || | Sbjct 1189850 CCACCTCTCAATCTCAAGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTATAGTCAGAC 1189909 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | ||| || |||||||| || || || | || || ||||| ||||| || || || Sbjct 1189910 AAAGTTCTGCCATCCTCCAATTGCTTACCAGCGAAAATCAATCTCTGCTGGTCAGGTGGG 1189969 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 ||||| || ||||| | ||| || | ||||||| | | | |||||| | ||||| Sbjct 1189970 ATACCCTCCTTGTCTTGAATCTTAGACTTGACGTTGTCAATAGTGTCGGAAGATTCGACC 1190029 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAA 94998 || | |||||||| || ||||| | ||| || || || Sbjct 1190030 TCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACGAA 1190067 >seq4 Length=1091360 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || |||||||||| | ||||||||||||||| |||||||| || | |||||| || | Sbjct 719718 CCACCTCTCAATCTAAGCACCAAGTGCAAAGTGGATTCCTTCTGGATGTTATAGTCAGAC 719777 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | || || |||||||| || || || | ||||| ||||| ||||| || || || Sbjct 719778 AACGTTCTGCCATCCTCCAATTGCTTACCAGCGAAGATCAATCTCTGCTGGTCAGGTGGG 719837 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 |||||||| ||||| | ||| || | ||| || | ||| |||||||| ||||| Sbjct 719838 ATACCTTCCTTGTCTTGAATCTTGGACTTAACATTGTCGATAGTGTCAGAAGACTCGACT 719897 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || | || || || || || || | || || || || |||||||| Sbjct 719898 TCGAGGGTAATAGTCTTACCCGTCAAGGTCTTGACGAAAATCTGCAT 719944 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448291099134480