Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20parabailii_20[genbank_20GCA_5F001984395.2_202017 -03-16] 18 sequences; 20,864,403 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq2 125 1e-24 seq5 104 4e-18 >seq2 Length=1189704 Score = 125 bits (138), Expect = 1e-24 Identities = 192/271 (71%), Gaps = 2/271 (1%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCG-CAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||||||||||| | |||| ||| |||||||||| || || || |||||||||||||| Sbjct 355883 GCTAAGCGTCACAGAAAGAT-TCTGAGAGATAACATTCAGGGTATTACCAAGCCAGCTAT 355941 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 | | | || ||| | | ||||| || |||||| | ||||| | |||| |||||| | Sbjct 355942 CAGAAGACTTGCTAGAAGAGGTGGTGTGAAGCGTATTTCTGGTCTTATCTACGAAGAGGT 356001 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 | | || |||||| ||| | || | |||||| |||||| || ||| || || Sbjct 356002 GAGAGCCGTCTTGAAGGCTTTCTTGGAGTCTGTTATCAGAGATGCTGTCACCTACACTGA 356061 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||||||||| | ||||| ||||| || ||||| | ||||| || | || | || || Sbjct 356062 GCACGCTAAGAGAAAGACCGTCACTTCTTTGGATGTTGTCTACGCTCTAAAGAGACAGGG 356121 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAATCT 16702 | | | |||| ||||| || ||||| || Sbjct 356122 CAGAACTCTTTACGGTTTCGGTGGTTAAGCT 356152 >seq5 Length=1077716 Score = 104 bits (114), Expect = 4e-18 Identities = 187/271 (69%), Gaps = 2/271 (1%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCG-CAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||||||||||| | |||| ||| |||||||||| || || || ||||| |||||||| Sbjct 395388 GCTAAGCGTCACAGAAAGAT-TCTGAGAGATAACATTCAGGGTATTACCAAACCAGCTAT 395446 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 | | | || || | | || || || |||||| | ||||| | | || |||||| | Sbjct 395447 CAGAAGACTTGCCAGAAGAGGCGGTGTGAAGCGTATTTCTGGTCTCATTTACGAAGAGGT 395506 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 | | || |||||| ||| | || | |||||| |||||| || ||| ||||| Sbjct 395507 GAGAGCCGTCTTGAAGGCTTTCTTGGAGTCTGTTATCAGAGATGCTGTCACCTACACCGA 395566 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || | ||||| ||||| || ||||| | ||||| || | || | || || Sbjct 395567 GCACGCCAAGAGAAAGACCGTCACTTCTTTGGATGTTGTCTACGCTCTAAAGAGACAGGG 395626 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAATCT 16702 | | | | || ||||| || ||||| || Sbjct 395627 CAGAACTTTGTACGGTTTCGGTGGTTAAGCT 395657 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075183542474