Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20parabailii_20[genbank_20GCA_5F001984395.2_202017 -03-16] 18 sequences; 20,864,403 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq11 140 2e-28 seq7 140 2e-28 seq3 140 2e-28 seq14 123 2e-23 seq10 105 4e-18 seq4 102 5e-17 seq9 98.7 7e-16 >seq11 Length=1516135 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 1504465 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 1504524 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 1504525 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 1504559 Score = 104 bits (114), Expect = 2e-17 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||||||||||| |||||| |||| |||||||||||||||||||||| | Sbjct 1506478 CTCTCTTTTCAAAGTTCTTTTCATCTTTCCATCACTGTACTTGTTCGCTATCGGTCTCTC 1506537 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||| ||| Sbjct 1506538 GCCAATATTTAGCTTTA 1506554 >seq7 Length=858772 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 873 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 814 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 813 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 779 >seq3 Length=1115933 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 941963 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 942022 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 942023 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 942057 Score = 104 bits (114), Expect = 2e-17 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||||||||||| |||||| |||| |||||||||||||||||||||| | Sbjct 943977 CTCTCTTTTCAAAGTTCTTTTCATCTTTCCATCACTGTACTTGTTCGCTATCGGTCTCTC 944036 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||| ||| Sbjct 944037 GCCAATATTTAGCTTTA 944053 >seq14 Length=1283838 Score = 123 bits (136), Expect = 2e-23 Identities = 166/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 |||||||||| || | ||| |||| ||| || || || ||||| ||||||||||||| Sbjct 778742 TACCACCTCTTAATCTCAAAACCAGATGCAGGGTTGATTCTTTTTGGATATTGTAATCAG 778683 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 ||||| | | || ||||| |||||||| ||||| |||| | ||| ||||| | | Sbjct 778682 ACAAAGTTCTGCCATCCTCTAACTGTTTTCCTGCAAAGATTAACCTTTGCTGATCAGGTG 778623 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 ||| |||||||| || || || |||||| || | || ||| || ||||| Sbjct 778622 GGATACCTTCTTTATCTTGGATCTTCGACTTCACGTTGTCGATAGTGTCAGAGGATTCAA 778563 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGT 38319 | || | ||||||||| ||||| || | || || || || |||||||||| Sbjct 778562 CCTCAAGTGTAATAGTCTTACCAGTAAGAGTCTTAACAAAAATCTGCATGT 778512 Score = 82.4 bits (90), Expect = 5e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 38090 ACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGA 38149 |||||||||||| | | || | ||| || || |||||||||||| ||||| ||||| Sbjct 779425 ACCACCTCTCAATCTTAGGACAAGATGCAGGGTTGACTCCTTTTGAATGTTGTAGTCAGA 779366 Query 38150 CAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGG 38209 | | | | | || || | || || || || || || || | ||||| || | || Sbjct 779365 AAGAGTTCTTCCATCCTCCAGCTGCTTACCTGCGAAGATCAGTCTCTGTTGGTCAGGTGG 779306 Query 38210 GACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAAC 38269 || |||||||| ||| || || ||| ||||| | || ||| || | || || Sbjct 779305 GATACCTTCTTTATCCTGGATCTTCGACTTTACATTGTCGATAGTGTCAGAAGACTCTAC 779246 Query 38270 TTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || | |||||||| ||||| || | ||| || || || |||||||| Sbjct 779245 CTCCAGCGTAATAGTCTTACCAGTAAGGGTCTTGACAAAAATCTGCAT 779198 >seq10 Length=1751495 Score = 105 bits (116), Expect = 4e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 38090 ACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGA 38149 |||||||||||| | | |||||| || | || ||||| ||||| || || ||||| Sbjct 575189 ACCACCTCTCAATCTAAGCACCAAGTGCAAGGTAGATTCCTTCTGAATGTTATAGTCAGA 575248 Query 38150 CAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGG 38209 ||| | | || || ||||| || || ||||| || | | || ||||| | || Sbjct 575249 CAAGGTTCTGCCATCCTCCAATTGCTTACCAGCAAAGATCAATCTCTGCTGATCAGGTGG 575308 Query 38210 GACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAAC 38269 | ||||| ||||| ||| ||| ||| ||||| | || ||| || | || || Sbjct 575309 AATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCGATAGTGTCAGAAGACTCGAC 575368 Query 38270 TTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320 ||| | |||||||| |||||||||||||| || ||||| |||||||| || Sbjct 575369 TTCAAGGGTAATAGTCTTACCCGTCAAGGTCTTGACGAAAATCTGCATCTT 575419 >seq4 Length=1091360 Score = 102 bits (112), Expect = 5e-17 Identities = 164/235 (70%), Gaps = 8/235 (3%) Strand=Plus/Plus Query 38090 ACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGA 38149 |||||||||||| | | |||||| || | |||| ||||| || || || || ||||| Sbjct 719717 ACCACCTCTCAATCTAAGCACCAAGTGCAAAGTGGATTCCTTCTGGATGTTATAGTCAGA 719776 Query 38150 CAAAACACGTT----CGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGG 38205 || ||||| | || || ||||| || || || || || | | || || || | Sbjct 719777 CA----ACGTTCTGCCATCCTCCAATTGCTTACCAGCGAAGATCAATCTCTGCTGGTCAG 719832 Query 38206 AGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTT 38265 |||| ||||| ||||| ||| || ||| ||||| | || ||| || | | Sbjct 719833 GTGGGATACCTTCCTTGTCTTGAATCTTGGACTTAACATTGTCGATAGTGTCAGAAGACT 719892 Query 38266 CAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320 | ||||| | |||||||| |||||||||||||| || ||||| |||||||| || Sbjct 719893 CGACTTCGAGGGTAATAGTCTTACCCGTCAAGGTCTTGACGAAAATCTGCATCTT 719947 >seq9 Length=2005801 Score = 98.7 bits (108), Expect = 7e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 |||||||||| | | ||| |||| ||| | ||| ||| |||||||| || || |||| Sbjct 503077 TACCACCTCTTAGTCTCAAAACCAGATGCAAAGTTGACTCTTTTTGAATGTTATAGTCAG 503136 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | | | | | | || || | || || || ||||| || | | |||||| || | | Sbjct 503137 ATAGAGTTCTTCCATCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTGTTGGTCAGGTG 503196 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 ||| |||||||| || || || ||| || || | || ||| || | || | Sbjct 503197 GGATACCTTCTTTATCTTGGATCTTCGACTTTACGTTGTCGATAGTGTCAGAAGACTCCA 503256 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | |||||||||||||| ||||| ||||| ||||| || || |||||||| Sbjct 503257 CCTCTAATGTAATAGTCTTACCGGTCAATGTTTTAACAAAAATCTGCAT 503305 Score = 95.1 bits (104), Expect = 8e-15 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 |||||||||| || | ||| || | || ||||| |||||||| ||||||||||||| Sbjct 503305 TACCACCTCTTAATCTCAAAACGAGGTGTAGAGTTGATTCCTTTTGGATATTGTAATCAG 503364 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | ||| | | || || || || || || || || || | | ||| ||||| | | Sbjct 503365 ATAAAGTTCTGCCATCCTCCAACTGCTTACCTGCGAAGATCAATCTTTGCTGATCAGGTG 503424 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 ||| ||||||||| ||| || || ||| || || | || ||| || ||| | Sbjct 503425 GGATGCCTTCTTTATCCTGGATCTTCGACTTTACGTTGTCGATAGTGTCAGAGGATTCGA 503484 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 | || | ||||||||| ||||| || | || || || || ||||||||| Sbjct 503485 CCTCAAGTGTAATAGTCTTACCAGTAAGAGTCTTAACAAAAATCTGCATG 503534 Score = 93.3 bits (102), Expect = 3e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 |||||||||| | | ||| ||||| || | ||| ||| |||||||| || || |||| Sbjct 502393 TACCACCTCTTAGTCTCAAAACCAAGTGCAAAGTTGACTCTTTTTGAATGTTATAGTCAG 502452 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 ||| | | | | || || | || || || ||||| || | | |||||| || | | Sbjct 502453 ACAGAGTTCTTCCATCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTGTTGGTCAGGTG 502512 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 ||| |||||||| ||| || || ||| || || | || ||| || ||||| Sbjct 502513 GGATACCTTCTTTATCCTGGATCTTCGACTTTACGTTGTCGATAGTGTCAGAGGATTCAA 502572 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | || | ||||||||| ||||| || | || || || ||||||||||| Sbjct 502573 CCTCAAGTGTAATAGTCTTACCAGTAAGAGTCTTAACAAATATCTGCAT 502621 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 38090 ACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGA 38149 ||||||||| || | | ||| | ||| || || ||| |||||||| ||||| ||||| Sbjct 502166 ACCACCTCTTAATCTTAGCACAAGATGTAGGGTCGACTCTTTTTGAATGTTGTAGTCAGA 502225 Query 38150 CAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGG 38209 | | | | | || || | ||| || || ||||| || | | ||||| |||| || Sbjct 502226 AAGAGTTCTTCCATCCTCCAGTTGCTTACCTGCAAAGATCAATCTCTGTTGGTCGGGCGG 502285 Query 38210 GACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAAC 38269 | ||| || |||||| ||| || || ||||| | | ||||| |||||| Sbjct 502286 AATGCCCTCCTTGTCCTGAATCTTGGATTTGACATTGTCAATGGTATCAGAGGATTCAAC 502345 Query 38270 TTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 ||| | ||||||||| ||||| || | || || || ||||||||||| Sbjct 502346 TTCGAGTGTAATAGTCTTACCGGTAAGAGTCTTAACAAATATCTGCAT 502393 Score = 89.7 bits (98), Expect = 3e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 |||||||||| | | ||| |||| ||| | ||| ||| |||||||| || || |||| Sbjct 502621 TACCACCTCTTAGTCTCAAAACCAGATGCAAAGTTGACTCTTTTTGAATGTTATAGTCAG 502680 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | | | | | | || || | || || || ||||| || | | |||||| || | | Sbjct 502681 ATAGAGTTCTTCCATCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTGTTGGTCAGGTG 502740 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 ||| |||||||| ||| || || ||| || || | || ||| || ||||| Sbjct 502741 GGATACCTTCTTTATCCTGGATCTTCGACTTTACGTTGTCGATAGTGTCAGAGGATTCAA 502800 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | || | ||||||||| ||||| || | || || || ||||||||||| Sbjct 502801 CCTCAAGTGTAATAGTCTTACCAGTAAGAGTCTTAACAAATATCTGCAT 502849 Score = 89.7 bits (98), Expect = 3e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 |||||||||| | | ||| |||| ||| | ||| ||| |||||||| || || |||| Sbjct 502849 TACCACCTCTTAGTCTCAAAACCAGATGCAAAGTTGACTCTTTTTGAATGTTATAGTCAG 502908 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | | | | | | || || | || || || ||||| || | | |||||| || | | Sbjct 502909 ATAGAGTTCTTCCATCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTGTTGGTCAGGTG 502968 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 ||| |||||||| ||| || || ||| || || | || ||| || ||||| Sbjct 502969 GGATACCTTCTTTATCCTGGATCTTCGACTTTACGTTGTCGATAGTGTCAGAGGATTCAA 503028 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | || | ||||||||| ||||| || | || || || ||||||||||| Sbjct 503029 CCTCAAGTGTAATAGTCTTACCAGTAAGAGTCTTAACAAATATCTGCAT 503077 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334947126520958