Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20parabailii_20[genbank_20GCA_5F001984395.2_202017 -03-16] 18 sequences; 20,864,403 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq14 131 1e-25 seq9 127 2e-24 seq10 114 1e-20 seq4 109 5e-19 seq6 98.7 9e-16 seq13 91.5 1e-13 >seq14 Length=1283838 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| |||||| | || ||||| | || ||| | || || || || ||| Sbjct 778514 ATGCAGATTTTTGTTAAGACTCTTACTGGTAAGACTATTACACTTGAGGTTGAATCCTCT 778573 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||||||||| ||||| || ||| || |||||||| || |||||||| || Sbjct 778574 GACACTATCGACAACGTGAAGTCGAAGATCCAAGATAAAGAAGGTATCCCACCTGATCAG 778633 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 || || | || ||||| || ||||| ||||| |||| | ||| || ||||||||| Sbjct 778634 CAAAGGTTAATCTTTGCAGGAAAACAGTTAGAGGATGGCAGAACTTTGTCTGATTACAAT 778693 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || ||||||||||| || || ||| | || | || ||||||| || Sbjct 778694 ATCCAAAAAGAATCAACCCTGCATCTGGTTTTGAGATTAAGAGGTGG 778740 Score = 105 bits (116), Expect = 6e-18 Identities = 162/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| | || ||||| | || || | || || ||||| ||| Sbjct 778742 ATGCAGATTTTTGTCAAGACCCTTACTGGTAAGACTATTACGCTGGAGGTAGAGTCTTCT 778801 Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||||||||||| || || ||| || ||| || |||||||| ||||||||||||| Sbjct 778802 GACACTATCGA--CAATGTAAAGTCGAAGATCCAGGATAAAGAAGGTATTCCACCTGACC 778859 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 ||||| | | || || || || || || | || |||| | ||| | || |||| Sbjct 778860 AACAGAGACTGATCTTCGCAGGTAAGCAGCTGGAGGATGGAAGAACTCTTTCTGACTACA 778919 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 | |||||||||||||| || || || | || | || ||||||| || Sbjct 778920 ACATTCAAAAAGAATCTACCCTGCACCTGGTTTTGAGATTAAGAGGTGG 778968 Score = 102 bits (112), Expect = 7e-17 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| | || ||||| | || || | || || ||||| ||| Sbjct 779198 ATGCAGATTTTTGTCAAGACCCTTACTGGTAAGACTATTACGCTGGAGGTAGAGTCTTCT 779257 Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||||||||||| || || ||| || ||| || |||||||| || |||||||||| Sbjct 779258 GACACTATCGA--CAATGTAAAGTCGAAGATCCAGGATAAAGAAGGTATCCCACCTGACC 779315 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 ||||| | | || || || || || || | || |||| | ||| | || |||| Sbjct 779316 AACAGAGACTGATCTTCGCAGGTAAGCAGCTGGAGGATGGAAGAACTCTTTCTGACTACA 779375 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 | |||||||| || || || || ||| | || ||||| | ||||| || Sbjct 779376 ACATTCAAAAGGAGTCAACCCTGCATCTTGTCCTAAGATTGAGAGGTGG 779424 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| |||||| | || ||||| | || ||| | || || || || ||| Sbjct 778970 ATGCAGATTTTTGTTAAGACTCTTACTGGTAAGACTATAACACTTGAGGTTGAATCCTCT 779029 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| ||||| ||||| | || | ||| ||||| || || ||||| || ||||| Sbjct 779030 GACACAATCGACAACGTGAAGTCGAAGATTCAG-GACAAGGAGGGCATTCCGCCCGACCA 779088 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 |||| | | || ||||| || || || | || |||| | ||| | || || || Sbjct 779089 ACAGAGATTGATCTTTGCTGGTAAGCAGCTGGAGGATGGAAGAACTCTTTCTGACTATAA 779148 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 |||||||||||||| || || || | || | || ||||||| || Sbjct 779149 CATTCAAAAAGAATCTACCCTGCACCTGGTTTTGAGATTAAGAGGTGG 779196 >seq9 Length=2005801 Score = 127 bits (140), Expect = 2e-24 Identities = 168/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| |||||||| |||||| | |||||||| | || ||| ||||||| || || ||| Sbjct 502393 ATGCAGATATTTGTTAAGACTCTTACCGGTAAGACTATTACACTCGAAGTTGAATCCTCT 502334 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 || || || || || || || | || | ||| ||||| || || ||||| || ||| Sbjct 502333 GATACCATTGA--CAATGTCAAATCCAAGATTCAG-GACAAGGAGGGCATTCCGCCCGAC 502277 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 |||||| | | || ||||| || || ||| | || |||| | ||| | || ||| Sbjct 502276 CAACAGAGATTGATCTTTGCAGGTAAGCAACTGGAGGATGGAAGAACTCTTTCTGACTAC 502217 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || ||||||||||| || || |||||| | |||||||| ||||||| || Sbjct 502216 AACATTCAAAAAGAGTCGACCCTACATCTTGTGCTAAGATTAAGAGGTGG 502167 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| || || ||||||||||| | || ||| | || |||||||| ||| Sbjct 503305 ATGCAGATTTTTGTTAAAACATTGACCGGTAAGACTATTACATTAGAGGTGGAGTCTTCT 503246 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||||||||| | ||| || ||| || |||||||| || |||||||||||| Sbjct 503245 GACACTATCGACAACGTAAAGTCGAAGATCCAAGATAAAGAAGGTATCCCACCTGACCAA 503186 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 || | | || ||||| || || || | || |||| | ||| | || || || Sbjct 503185 CAAAGATTGATCTTTGCAGGTAAGCAGCTGGAGGATGGAAGAACTCTATCTGACTATAAC 503126 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||||||||||| || || | ||| | || | || |||||||| || Sbjct 503125 ATTCAAAAAGAGTCAACTTTGCATCTGGTTTTGAGACTAAGAGGTGG 503079 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| |||||||| |||||| | || ||||| | || ||| | || || || || ||| Sbjct 502621 ATGCAGATATTTGTTAAGACTCTTACTGGTAAGACTATTACACTTGAGGTTGAATCCTCT 502562 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||||||||| | ||| || ||| || |||||||| || |||||||||||| Sbjct 502561 GACACTATCGACAACGTAAAGTCGAAGATCCAGGATAAAGAAGGTATCCCACCTGACCAA 502502 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 || | | || ||||| || || || | || |||| | ||| || || || || Sbjct 502501 CAAAGATTGATCTTTGCAGGTAAGCAGCTGGAGGATGGAAGAACTCTGTCTGACTATAAC 502442 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||||||||||| || || | || || || | || |||||||| || Sbjct 502441 ATTCAAAAAGAGTCAACTTTGCACTTGGTTTTGAGACTAAGAGGTGG 502395 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| |||||||| |||||| | || ||||| | || ||| | || || || || ||| Sbjct 502849 ATGCAGATATTTGTTAAGACTCTTACTGGTAAGACTATTACACTTGAGGTTGAATCCTCT 502790 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||||||||| | ||| || ||| || |||||||| || |||||||||||| Sbjct 502789 GACACTATCGACAACGTAAAGTCGAAGATCCAGGATAAAGAAGGTATCCCACCTGACCAA 502730 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 || | | || ||||| || || || | || |||| | ||| | || || || Sbjct 502729 CAAAGATTGATCTTTGCAGGTAAGCAGCTGGAGGATGGAAGAACTCTATCTGACTATAAC 502670 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||||||||||| || || | ||| | || | || |||||||| || Sbjct 502669 ATTCAAAAAGAGTCAACTTTGCATCTGGTTTTGAGACTAAGAGGTGG 502623 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| |||||||| |||||| | || ||||| | || ||| | || || || || ||| Sbjct 503077 ATGCAGATATTTGTTAAGACTCTTACTGGTAAGACTATTACACTTGAGGTTGAATCCTCT 503018 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||||||||| | ||| || ||| || |||||||| || |||||||||||| Sbjct 503017 GACACTATCGACAACGTAAAGTCGAAGATCCAGGATAAAGAAGGTATCCCACCTGACCAA 502958 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 || | | || ||||| || || || | || |||| | ||| | || || || Sbjct 502957 CAAAGATTGATCTTTGCAGGTAAGCAGCTGGAGGATGGAAGAACTCTATCTGACTATAAC 502898 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||||||||||| || || | ||| | || | || |||||||| || Sbjct 502897 ATTCAAAAAGAGTCAACTTTGCATCTGGTTTTGAGACTAAGAGGTGG 502851 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| |||||| | || ||||| | || ||| | || || || || ||| Sbjct 503533 ATGCAGATTTTTGTTAAGACTCTTACTGGTAAGACTATTACACTTGAGGTCGAATCCTCT 503474 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||||||||| | ||| || ||| || |||||||| || |||||||| || Sbjct 503473 GACACTATCGACAACGTAAAGTCGAAGATCCAGGATAAAGAAGGCATCCCACCTGATCAG 503414 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 || | | || || || || || || || || |||| | ||| | ||||||||| Sbjct 503413 CAAAGATTGATCTTCGCAGGTAAGCAGTTGGAGGATGGCAGAACTTTATCTGATTACAAT 503354 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || ||||| ||||| || ||||| | || | || ||||||| || Sbjct 503353 ATCCAAAAGGAATCAACTCTACACCTCGTTTTGAGATTAAGAGGTGG 503307 >seq10 Length=1751495 Score = 114 bits (126), Expect = 1e-20 Identities = 166/230 (72%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| ||||| ||||| | || || | ||||| ||||| ||| Sbjct 575416 ATGCAGATTTTCGTCAAGACCTTGACGGGTAAGACTATTACCCTTGAAGTCGAGTCTTCT 575357 Query 25059 GACACTATCGAGTCACTG--AAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 ||||||||||| || || ||| |||| | ||| ||||| ||||| ||||||||||| Sbjct 575356 GACACTATCGA--CAATGTCAAGTCAAAGATTCAA-GACAAGGAAGGTATTCCACCTGAT 575300 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || ||| | | || ||||| || || ||||| || |||| | || || || || Sbjct 575299 CAGCAGAGATTGATCTTTGCTGGTAAGCAATTGGAGGATGGCAGAACCTTGTCTGACTAT 575240 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || ||||| || ||||| || | || || ||||| || | ||||| || Sbjct 575239 AACATTCAGAAGGAATCTACCTTGCACTTGGTGCTTAGATTGAGAGGTGG 575190 >seq4 Length=1091360 Score = 109 bits (120), Expect = 5e-19 Identities = 165/230 (72%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| ||||| ||||| | || || ||||||| ||||| ||| Sbjct 719944 ATGCAGATTTTCGTCAAGACCTTGACGGGTAAGACTATTACCCTCGAAGTCGAGTCTTCT 719885 Query 25059 GACACTATCGAGTCACTG--AAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 ||||||||||| || || ||| | || | ||| ||||| ||||| || ||||||||| Sbjct 719884 GACACTATCGA--CAATGTTAAGTCCAAGATTCA-AGACAAGGAAGGTATCCCACCTGAC 719828 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || ||| | | || || || || || ||||| || |||| | || || || || Sbjct 719827 CAGCAGAGATTGATCTTCGCTGGTAAGCAATTGGAGGATGGCAGAACGTTGTCTGACTAT 719768 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || || || || |||||||| | || || ||||| || | ||||| || Sbjct 719767 AACATCCAGAAGGAATCCACTTTGCACTTGGTGCTTAGATTGAGAGGTGG 719718 >seq6 Length=1007293 Score = 98.7 bits (108), Expect = 9e-16 Identities = 139/191 (73%), Gaps = 6/191 (3%) Strand=Plus/Plus Query 25008 TTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATC 25067 || || ||||||||||| ||||| ||||||| | || || || || || |||||||| Sbjct 101196 TTCGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAGGTCGAATCCTCCGACACTATT 101255 Query 25068 GAGTCACTG--AAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGG 25124 || || || ||| | || | ||| ||||| || || |||||||||||||| ||| | Sbjct 101256 GA--CAATGTCAAGTCTAAGATTCAA-GACAAGGAGGGTATTCCACCTGACCAGCAGAGA 101312 Query 25125 ATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAA 25184 | ||||| || || || || || || |||| | ||| || || ||||| || ||| Sbjct 101313 TTGATTTTCGCTGGTAAGCAGTTGGAGGATGGCAGAACTTTGTCTGACTACAACATCCAA 101372 Query 25185 AAAGAATCCAC 25195 || |||||||| Sbjct 101373 AAGGAATCCAC 101383 >seq13 Length=1315104 Score = 91.5 bits (100), Expect = 1e-13 Identities = 135/189 (71%), Gaps = 2/189 (1%) Strand=Plus/Minus Query 25008 TTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATC 25067 || || ||||||||||| ||||| ||||||| | || || || || || |||||||| Sbjct 1190067 TTCGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAGGTCGAATCTTCCGACACTATT 1190008 Query 25068 GAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGAT 25126 || | ||| | || | ||| ||||| || || || ||||||||||| ||| | | Sbjct 1190007 GACAACGTCAAGTCTAAGATTCAA-GACAAGGAGGGTATCCCACCTGACCAGCAGAGATT 1189949 Query 25127 TATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAA 25186 ||||| || || || ||||| || |||| | ||| || || || || || ||||| Sbjct 1189948 GATTTTCGCTGGTAAGCAATTGGAGGATGGCAGAACTTTGTCTGACTATAACATCCAAAA 1189889 Query 25187 AGAATCCAC 25195 |||||||| Sbjct 1189888 GGAATCCAC 1189880 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433327904938670