Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20parabailii_20[genbank_20GCA_5F001984395.2_202017 -03-16] 18 sequences; 20,864,403 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq7 91.5 3e-13 seq16 87.8 4e-12 >seq7 Length=858772 Score = 91.5 bits (100), Expect = 3e-13 Identities = 175/255 (69%), Gaps = 6/255 (2%) Strand=Plus/Plus Query 279344 AGGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAA 279403 |||||||||||| ||| ||||||| ||||| | || || |||| |||||| ||||||| Sbjct 257954 AGGTGAGGATCTATGTAACTGTGAGTTCTCTTTGGCCTACGGTGCCAAGATTTTGCTAAA 258013 Query 279404 CTCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGC 279463 | || | || | | ||| | || | | |||||||| ||||| || || || Sbjct 258014 CAGAACACAGCTAAGATTGAAGAGAGGTAGAAGATATGGTCTATGTGGTCCTAACGGTGC 258073 Query 279464 GGGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGC 279523 ||||| ||| | ||| | |||||||| |||||||| | || || |||||| | | Sbjct 258074 CGGTAAATCTACTTTGATGAGAGCCATTGCCAACGGTCAAGTTGATGGCTTTCCT-TCCC 258132 Query 279524 ATCTGAGGTA---AGGACAGTGTATGTAGAGCACGACATCGACTCCTCTCTCTCGGATAG 279580 | |||| | || || || || || |||||||| || ||| ||| | | || | Sbjct 258133 A--GGAGGAATGTAGAACCGTTTACGTTGAGCACGATATTGACGGTACTCACGCTGACAC 258190 Query 279581 CACTGTGTTCGACTT 279595 | ||||||| || || Sbjct 258191 CTCTGTGTTGGAATT 258205 >seq16 Length=1240939 Score = 87.8 bits (96), Expect = 4e-12 Identities = 155/223 (70%), Gaps = 6/223 (3%) Strand=Plus/Plus Query 279344 AGGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAA 279403 |||||||||||| ||| ||||||| ||||| | || || |||| |||||| ||||||| Sbjct 283730 AGGTGAGGATCTATGTAACTGTGAGTTCTCTTTGGCTTACGGTGCCAAGATTTTGCTAAA 283789 Query 279404 CTCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGC 279463 | |||| || | | ||| | || | | |||||||| ||||| || || || Sbjct 283790 CAGAACCCAGCTAAGATTGAAGAGAGGTAGAAGATATGGTCTATGTGGTCCTAACGGTGC 283849 Query 279464 GGGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGC 279523 ||||| ||| | ||| | || ||||| || ||||| | || || |||||| | | Sbjct 283850 CGGTAAATCTACTTTGATGAGAGCTATTGCCAATGGTCAAGTTGACGGCTTTCCT-TCCC 283908 Query 279524 ATCTGAGGTA---AGGACAGTGTATGTAGAGCACGACATCGAC 279563 | |||| | || || || || ||||||||||| || ||| Sbjct 283909 A--GGAGGAATGTAGAACTGTTTACGTAGAGCACGATATTGAC 283949 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027836562955138