Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20parabailii_20[genbank_20GCA_5F001984395.2_202017 -03-16] 18 sequences; 20,864,403 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq14 125 2e-23 seq9 125 2e-23 seq4 107 5e-18 seq13 91.5 3e-13 seq10 86.0 1e-11 >seq14 Length=1283838 Score = 125 bits (138), Expect = 2e-23 Identities = 143/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||||||||||||||| || || | | || | || || ||||| ||||||||||| || Sbjct 778705 TTCTTTTTGGATATTGTAATCAGACAAAGTTCTGCCATCCTCTAACTGTTTTCCTGCAAA 778646 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 ||| | | || ||| | |||||| ||||||||||| ||||| |||| |||||||| Sbjct 778645 GATTAACCTTTGCTGATCAGGTGGGATACCTTCTTTATCTTGGATCTTCGACTTCACGTT 778586 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || |||| || ||||| || || || || || ||||| || || |||||||| || Sbjct 778585 GTCGATAGTGTCAGAGGATTCAACCTCAAGTGTAATAGTCTTACCAGTAAGAGTCTTAAC 778526 Query 288462 GAATATCTGCAT 288473 || |||||||| Sbjct 778525 AAAAATCTGCAT 778514 Score = 125 bits (138), Expect = 2e-23 Identities = 143/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||||||||| || || ||||| | || || | ||| || || | || || |||||||| Sbjct 778933 TTCTTTTTGAATGTTGTAGTCAGAAAGAGTTCTTCCATCCTCCAGCTGCTTACCTGCGAA 778874 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 |||||| | |||||| | ||| || ||||||||||||||||| |||| || || || Sbjct 778873 GATCAGTCTCTGTTGGTCAGGTGGAATACCTTCTTTATCCTGGATCTTCGACTTTACATT 778814 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || |||| || || ||||| || ||||| || ||||| || || || |||||||| Sbjct 778813 GTCGATAGTGTCAGAAGACTCTACCTCCAGCGTAATAGTCTTACCAGTAAGGGTCTTGAC 778754 Query 288462 GAATATCTGCAT 288473 || |||||||| Sbjct 778753 AAAAATCTGCAT 778742 Score = 125 bits (138), Expect = 2e-23 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | | ||| || || ||||| | || || ||||| || || ||||| | Sbjct 779424 CCACCTCTCAATCTTAGGACAAGATGCAGGGTTGACTCCTTTTGAATGTTGTAGTCAGAA 779365 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || | ||| || || | || || |||||||||||||| | |||||| | |||| Sbjct 779364 AGAGTTCTTCCATCCTCCAGCTGCTTACCTGCGAAGATCAGTCTCTGTTGGTCAGGTGGG 779305 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || ||||||||||||||||| |||| || || || || |||| || || ||||| Sbjct 779304 ATACCTTCTTTATCCTGGATCTTCGACTTTACATTGTCGATAGTGTCAGAAGACTCTACC 779245 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| || ||||| || || || |||||||| || |||||||| Sbjct 779244 TCCAGCGTAATAGTCTTACCAGTAAGGGTCTTGACAAAAATCTGCAT 779198 >seq9 Length=2005801 Score = 125 bits (138), Expect = 2e-23 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | ||||| | || ||||| | || |||||||| || |||||||| | Sbjct 502623 CCACCTCTTAGTCTCAAAACCAGATGCAAAGTTGACTCTTTTTGAATGTTATAGTCAGAT 502682 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || | ||| || || | || || ||||| ||||||| | ||||| | |||| Sbjct 502683 AGAGTTCTTCCATCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTGTTGGTCAGGTGGG 502742 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || ||||||||||||||||| |||| || ||||| || |||| || ||||| || Sbjct 502743 ATACCTTCTTTATCCTGGATCTTCGACTTTACGTTGTCGATAGTGTCAGAGGATTCAACC 502802 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || ||||| || || |||||||| || ||||||||||| Sbjct 502803 TCAAGTGTAATAGTCTTACCAGTAAGAGTCTTAACAAATATCTGCAT 502849 Score = 125 bits (138), Expect = 2e-23 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | ||||| | || ||||| | || |||||||| || |||||||| | Sbjct 502851 CCACCTCTTAGTCTCAAAACCAGATGCAAAGTTGACTCTTTTTGAATGTTATAGTCAGAT 502910 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || | ||| || || | || || ||||| ||||||| | ||||| | |||| Sbjct 502911 AGAGTTCTTCCATCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTGTTGGTCAGGTGGG 502970 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || ||||||||||||||||| |||| || ||||| || |||| || ||||| || Sbjct 502971 ATACCTTCTTTATCCTGGATCTTCGACTTTACGTTGTCGATAGTGTCAGAGGATTCAACC 503030 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || ||||| || || |||||||| || ||||||||||| Sbjct 503031 TCAAGTGTAATAGTCTTACCAGTAAGAGTCTTAACAAATATCTGCAT 503077 Score = 123 bits (136), Expect = 6e-23 Identities = 142/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 |||||||| || |||||||| | || || | ||| || || | || || ||||| ||| Sbjct 502431 TCTTTTTGAATGTTATAGTCAGACAGAGTTCTTCCATCCTCCAGCTGCTTACCTGCAAAG 502490 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 |||| | ||||| | |||||| ||||||||||||||||| |||| || ||||| Sbjct 502491 ATCAATCTTTGTTGGTCAGGTGGGATACCTTCTTTATCCTGGATCTTCGACTTTACGTTG 502550 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || |||| || ||||| || || || || || ||||| || || |||||||| || Sbjct 502551 TCGATAGTGTCAGAGGATTCAACCTCAAGTGTAATAGTCTTACCAGTAAGAGTCTTAACA 502610 Query 288463 AATATCTGCAT 288473 ||||||||||| Sbjct 502611 AATATCTGCAT 502621 Score = 116 bits (128), Expect = 9e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| ||||||||||| || || | | || | || || || || || || |||||||| Sbjct 503342 TTCCTTTTGGATATTGTAATCAGATAAAGTTCTGCCATCCTCCAACTGCTTACCTGCGAA 503401 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 ||||| | || ||| | |||||| ||||||||||||||||| |||| || ||||| Sbjct 503402 GATCAATCTTTGCTGATCAGGTGGGATGCCTTCTTTATCCTGGATCTTCGACTTTACGTT 503461 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || |||| || ||||| || || || || || ||||| || || |||||||| || Sbjct 503462 GTCGATAGTGTCAGAGGATTCGACCTCAAGTGTAATAGTCTTACCAGTAAGAGTCTTAAC 503521 Query 288462 GAATATCTGCAT 288473 || |||||||| Sbjct 503522 AAAAATCTGCAT 503533 Score = 107 bits (118), Expect = 5e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | | ||| || || ||||| | || |||||||| || || ||||| | Sbjct 502167 CCACCTCTTAATCTTAGCACAAGATGTAGGGTCGACTCTTTTTGAATGTTGTAGTCAGAA 502226 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || | ||| || || | ||| || ||||| ||||||| | |||||| || Sbjct 502227 AGAGTTCTTCCATCCTCCAGTTGCTTACCTGCAAAGATCAATCTCTGTTGGTCGGGCGGA 502286 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || ||||| || || | ||| || || || || | ||| ||||| ||| Sbjct 502287 ATGCCCTCCTTGTCCTGAATCTTGGATTTGACATTGTCAATGGTATCAGAGGATTCAACT 502346 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| || || ||||| ||||| |||||||| || ||||||||||| Sbjct 502347 TCGAGTGTAATAGTCTTACCGGTAAGAGTCTTAACAAATATCTGCAT 502393 Score = 104 bits (114), Expect = 6e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | ||||| | || ||||| | || |||||||| || |||||||| | Sbjct 503079 CCACCTCTTAGTCTCAAAACCAGATGCAAAGTTGACTCTTTTTGAATGTTATAGTCAGAT 503138 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || | ||| || || | || || ||||| ||||||| | ||||| | |||| Sbjct 503139 AGAGTTCTTCCATCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTGTTGGTCAGGTGGG 503198 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || ||||||||||| ||||| |||| || ||||| || |||| || || || || Sbjct 503199 ATACCTTCTTTATCTTGGATCTTCGACTTTACGTTGTCGATAGTGTCAGAAGACTCCACC 503258 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || | || || ||||| ||||||| || || || || |||||||| Sbjct 503259 TCTAATGTAATAGTCTTACCGGTCAATGTTTTAACAAAAATCTGCAT 503305 >seq4 Length=1091360 Score = 107 bits (118), Expect = 5e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | | |||||| || | || | ||| ||| || ||||| |||||||| | Sbjct 719718 CCACCTCTCAATCTAAGCACCAAGTGCAAAGTGGATTCCTTCTGGATGTTATAGTCAGAC 719777 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | ||| | || || || ||||| || || |||||||||| | ||| || | |||| Sbjct 719778 AACGTTCTGCCATCCTCCAATTGCTTACCAGCGAAGATCAATCTCTGCTGGTCAGGTGGG 719837 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || ||||| || || || || || | || || || || |||| || || || ||| Sbjct 719838 ATACCTTCCTTGTCTTGAATCTTGGACTTAACATTGTCGATAGTGTCAGAAGACTCGACT 719897 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| || || ||||| || |||| ||||||||||| |||||||| Sbjct 719898 TCGAGGGTAATAGTCTTACCCGTCAAGGTCTTGACGAAAATCTGCAT 719944 >seq13 Length=1315104 Score = 91.5 bits (100), Expect = 3e-13 Identities = 130/183 (71%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| |||||||| |||||||| | | || | || || || ||||| || || ||||| Sbjct 1189885 TTCCTTTTGGATGTTATAGTCAGACAAAGTTCTGCCATCCTCCAATTGCTTACCAGCGAA 1189944 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 |||| | ||| || | |||||| || || || || || || || | || ||||| Sbjct 1189945 AATCAATCTCTGCTGGTCAGGTGGGATACCCTCCTTGTCTTGAATCTTAGACTTGACGTT 1190004 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || |||| ||| ||||| || || | ||||| ||||| || |||| ||||||||| Sbjct 1190005 GTCAATAGTGTCGGAAGATTCGACCTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGAC 1190064 Query 288462 GAA 288464 ||| Sbjct 1190065 GAA 1190067 >seq10 Length=1751495 Score = 86.0 bits (94), Expect = 1e-11 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| || || || |||||||| | | || | || || || ||||| || || || || Sbjct 575225 TTCCTTCTGAATGTTATAGTCAGACAAGGTTCTGCCATCCTCCAATTGCTTACCAGCAAA 575284 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 ||||| | ||| ||| | ||| || ||||| || || || || || | || || || Sbjct 575285 GATCAATCTCTGCTGATCAGGTGGAATACCTTCCTTGTCTTGAATCTTTGACTTGACATT 575344 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || |||| || || || ||||| || || || ||||| || |||| |||||||| Sbjct 575345 GTCGATAGTGTCAGAAGACTCGACTTCAAGGGTAATAGTCTTACCCGTCAAGGTCTTGAC 575404 Query 288462 GAATATCTGCAT 288473 ||| |||||||| Sbjct 575405 GAAAATCTGCAT 575416 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179654127942204