Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zygosaccharomyces_20parabailii_20[genbank_20GCA_5F001984395.2_202017
-03-16] 18 sequences; 20,864,403 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq6 102 9e-17
seq13 96.9 4e-15
seq14 95.1 1e-14
seq9 82.4 8e-11
>seq6
Length=1007293
Score = 102 bits (112), Expect = 9e-17
Identities = 156/220 (71%), Gaps = 2/220 (1%)
Strand=Plus/Minus
Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040
||| ||||| || | ||| ||||| ||||| ||| |||||||| || ||||| ||||
Sbjct 101414 ACCACCTCTCAATCTCAAGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCAGA 101355
Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100
|| ||| | | || || | ||||||||||||||| || | || ||||||||| | |||
Sbjct 101354 CAAAGTTCTGCCATCCTCCAACTGCTTACCAGCGAAAATCAATCTCTGCTGGTCAGGTGG 101295
Query 42101 CACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 42159
| | |||||||| | ||| | || | |||| | | | |||||| ||||| |
Sbjct 101294 AATACCCTCCTTGT-CTTGAATCTTAGACTTGACATTGTCAATAGTGTCGGAGGATTCGA 101236
Query 42160 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAA 42199
| || | |||||||| || || || | ||||| || ||
Sbjct 101235 CCTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACGAA 101196
>seq13
Length=1315104
Score = 96.9 bits (106), Expect = 4e-15
Identities = 157/221 (71%), Gaps = 4/221 (2%)
Strand=Plus/Plus
Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040
||| ||||| || | ||| ||||| ||||| ||| |||||||| || || || ||||
Sbjct 1189849 ACCACCTCTCAATCTCAAGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTATAGTCAGA 1189908
Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100
|| ||| | | || || | |||||||||||||| || | || ||||||||| | |||
Sbjct 1189909 CAAAGTTCTGCCATCCTCCAATTGCTTACCAGCGAAAATCAATCTCTGCTGGTCAGGTGG 1189968
Query 42101 CACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCG-CCACCGTGTCGCTCGATTCC 42158
| | |||||||| | ||| | || | |||| ||| | | | |||||| |||||
Sbjct 1189969 GATACCCTCCTTGT-CTTGAATCTTAGACTTGA-CGTTGTCAATAGTGTCGGAAGATTCG 1190026
Query 42159 ACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAA 42199
|| || | |||||||| || || || | ||||| || ||
Sbjct 1190027 ACCTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACGAA 1190067
>seq14
Length=1283838
Score = 95.1 bits (104), Expect = 1e-14
Identities = 160/229 (70%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040
||| |||||||| | ||| |||| |||| || || |||||||| || || ||||
Sbjct 779197 ACCACCTCTTAATCTCAAAACCAGGTGCAGGGTAGATTCTTTTTGAATGTTATAGTCAGA 779138
Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100
||||| | | || || |||||||||||||| || || | || ||| ||||||| ||
Sbjct 779137 AAGAGTTCTTCCATCCTCCAGCTGCTTACCAGCAAAGATCAATCTCTGTTGGTCGGGCGG 779078
Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCA 42159
| || |||||||||| ||| | || | | ||| | | | ||||| ||||| |
Sbjct 779077 AATGCCCTCCTTGTCC-TGAATCTTCGACTTCACGTTGTCGATTGTGTCAGAGGATTCAA 779019
Query 42160 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
| || | || || || || || || || ||||| ||||| || |||||
Sbjct 779018 CCTCAAGTGTTATAGTCTTACCAGTAAGAGTCTTAACAAAAATCTGCAT 778970
Score = 82.4 bits (90), Expect = 8e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040
||| |||||||| | ||| |||| |||| || || |||||||| ||||| ||||
Sbjct 778969 ACCACCTCTTAATCTCAAAACCAGGTGCAGGGTAGATTCTTTTTGAATGTTGTAGTCAGA 778910
Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100
||||| | | || || ||||||||||| ||||| || |||| ||| ||||| | |||
Sbjct 778909 AAGAGTTCTTCCATCCTCCAGCTGCTTACCTGCGAAGATCAGTCTCTGTTGGTCAGGTGG 778850
Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 42160
| | || || ||| ||| || || | | | | ||||| || || ||
Sbjct 778849 AATACCTTCTTTATCCTGGATCTTCGACTTTACATTGTCGATAGTGTCAGAAGACTCTAC 778790
Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
|| | ||| || || || || || || ||||| ||||| || |||||
Sbjct 778789 CTCCAGCGTAATAGTCTTACCAGTAAGGGTCTTGACAAAAATCTGCAT 778742
>seq9
Length=2005801
Score = 82.4 bits (90), Expect = 8e-11
Identities = 157/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040
||| ||||||| | ||| ||||| ||||| || ||| |||||||| || || ||||
Sbjct 502394 ACCACCTCTTAGTCTCAAAACCAAGTGCAAAGTTGACTCTTTTTGAATGTTATAGTCAGA 502453
Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100
|||||| | | || || ||||||||||| || || || | || || ||||| | |||
Sbjct 502454 CAGAGTTCTTCCATCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTGTTGGTCAGGTGG 502513
Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCA 42159
| | || || ||| ||| || || | ||| | | | ||||| ||||| |
Sbjct 502514 GATACCTTCTTTATCCTGGATCTTCGACTTTA-CGTTGTCGATAGTGTCAGAGGATTCAA 502572
Query 42160 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
| || | || || || || || || || ||||| ||||| || |||||
Sbjct 502573 CCTCAAGTGTAATAGTCTTACCAGTAAGAGTCTTAACAAATATCTGCAT 502621
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 543212677777120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |