Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20parabailii_20[genbank_20GCA_5F001984395.2_202017 -03-16] 18 sequences; 20,864,403 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq6 102 9e-17 seq13 96.9 4e-15 seq14 95.1 1e-14 seq9 82.4 8e-11 >seq6 Length=1007293 Score = 102 bits (112), Expect = 9e-17 Identities = 156/220 (71%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 ||| ||||| || | ||| ||||| ||||| ||| |||||||| || ||||| |||| Sbjct 101414 ACCACCTCTCAATCTCAAGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCAGA 101355 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 || ||| | | || || | ||||||||||||||| || | || ||||||||| | ||| Sbjct 101354 CAAAGTTCTGCCATCCTCCAACTGCTTACCAGCGAAAATCAATCTCTGCTGGTCAGGTGG 101295 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 42159 | | |||||||| | ||| | || | |||| | | | |||||| ||||| | Sbjct 101294 AATACCCTCCTTGT-CTTGAATCTTAGACTTGACATTGTCAATAGTGTCGGAGGATTCGA 101236 Query 42160 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAA 42199 | || | |||||||| || || || | ||||| || || Sbjct 101235 CCTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACGAA 101196 >seq13 Length=1315104 Score = 96.9 bits (106), Expect = 4e-15 Identities = 157/221 (71%), Gaps = 4/221 (2%) Strand=Plus/Plus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 ||| ||||| || | ||| ||||| ||||| ||| |||||||| || || || |||| Sbjct 1189849 ACCACCTCTCAATCTCAAGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTATAGTCAGA 1189908 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 || ||| | | || || | |||||||||||||| || | || ||||||||| | ||| Sbjct 1189909 CAAAGTTCTGCCATCCTCCAATTGCTTACCAGCGAAAATCAATCTCTGCTGGTCAGGTGG 1189968 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCG-CCACCGTGTCGCTCGATTCC 42158 | | |||||||| | ||| | || | |||| ||| | | | |||||| ||||| Sbjct 1189969 GATACCCTCCTTGT-CTTGAATCTTAGACTTGA-CGTTGTCAATAGTGTCGGAAGATTCG 1190026 Query 42159 ACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAA 42199 || || | |||||||| || || || | ||||| || || Sbjct 1190027 ACCTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACGAA 1190067 >seq14 Length=1283838 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 ||| |||||||| | ||| |||| |||| || || |||||||| || || |||| Sbjct 779197 ACCACCTCTTAATCTCAAAACCAGGTGCAGGGTAGATTCTTTTTGAATGTTATAGTCAGA 779138 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 ||||| | | || || |||||||||||||| || || | || ||| ||||||| || Sbjct 779137 AAGAGTTCTTCCATCCTCCAGCTGCTTACCAGCAAAGATCAATCTCTGTTGGTCGGGCGG 779078 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCA 42159 | || |||||||||| ||| | || | | ||| | | | ||||| ||||| | Sbjct 779077 AATGCCCTCCTTGTCC-TGAATCTTCGACTTCACGTTGTCGATTGTGTCAGAGGATTCAA 779019 Query 42160 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 | || | || || || || || || || ||||| ||||| || ||||| Sbjct 779018 CCTCAAGTGTTATAGTCTTACCAGTAAGAGTCTTAACAAAAATCTGCAT 778970 Score = 82.4 bits (90), Expect = 8e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 ||| |||||||| | ||| |||| |||| || || |||||||| ||||| |||| Sbjct 778969 ACCACCTCTTAATCTCAAAACCAGGTGCAGGGTAGATTCTTTTTGAATGTTGTAGTCAGA 778910 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 ||||| | | || || ||||||||||| ||||| || |||| ||| ||||| | ||| Sbjct 778909 AAGAGTTCTTCCATCCTCCAGCTGCTTACCTGCGAAGATCAGTCTCTGTTGGTCAGGTGG 778850 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 42160 | | || || ||| ||| || || | | | | ||||| || || || Sbjct 778849 AATACCTTCTTTATCCTGGATCTTCGACTTTACATTGTCGATAGTGTCAGAAGACTCTAC 778790 Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || | ||| || || || || || || ||||| ||||| || ||||| Sbjct 778789 CTCCAGCGTAATAGTCTTACCAGTAAGGGTCTTGACAAAAATCTGCAT 778742 >seq9 Length=2005801 Score = 82.4 bits (90), Expect = 8e-11 Identities = 157/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 ||| ||||||| | ||| ||||| ||||| || ||| |||||||| || || |||| Sbjct 502394 ACCACCTCTTAGTCTCAAAACCAAGTGCAAAGTTGACTCTTTTTGAATGTTATAGTCAGA 502453 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 |||||| | | || || ||||||||||| || || || | || || ||||| | ||| Sbjct 502454 CAGAGTTCTTCCATCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTGTTGGTCAGGTGG 502513 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCA 42159 | | || || ||| ||| || || | ||| | | | ||||| ||||| | Sbjct 502514 GATACCTTCTTTATCCTGGATCTTCGACTTTA-CGTTGTCGATAGTGTCAGAGGATTCAA 502572 Query 42160 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 | || | || || || || || || || ||||| ||||| || ||||| Sbjct 502573 CCTCAAGTGTAATAGTCTTACCAGTAAGAGTCTTAACAAATATCTGCAT 502621 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543212677777120