Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20parabailii_20[genbank_20GCA_5F001984395.2_202017 -03-16] 18 sequences; 20,864,403 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq12 125 7e-24 seq1 123 2e-23 seq14 118 1e-21 seq9 100 3e-16 seq16 84.2 2e-11 >seq12 Length=1443312 Score = 125 bits (138), Expect = 7e-24 Identities = 333/500 (67%), Gaps = 39/500 (8%) Strand=Plus/Minus Query 52342 AAAAGGCTCAGTGGGCAATGAAGTGGAT-CGAGAGCGACACCGCC----ACGCTGGCCGA 52396 |||||||| ||||||| || | |||||| | ||| |||| || |||||| || Sbjct 767885 AAAAGGCTGAGTGGGCTATCAGGTGGATTCAAGAT-GACAATGCTCTTTACGCTGA--GA 767829 Query 52397 GCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTTTGCCGCCAT 52456 | || ||||||| || ||| ||| || || | ||||| || || ||||||||||| Sbjct 767828 G-GC-TGGTGGCATTTGCCGCAGTAGAAGGTATCTTTTTCTCGGGATCTTTTGCCGCCAT 767771 Query 52457 CTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGAGTTGATATC 52516 ||||| | |||| ||| ||| | ||||| |||||||| || |||||||| || | Sbjct 767770 CTTTTGGCTCAAAAAGAAGGGCCTCATGCCAGGCCTGACCTTTTCAAACGAGTTAATCTG 767711 Query 52517 GCGCGACGAAGGACTGCACACGGACTTTGCGTGCCT----------CTACTACAAGACGC 52566 | || |||||| ||||||| |||||||| || || | ||| | || Sbjct 767710 TAGAGATGAAGGATTGCACACAGACTTTGCTTGTCTAATGTTTTCCCATCTAAGAAACAA 767651 Query 52567 GCGTGACCGAAAAATTGGATTCGGACACGATCCTGAGCATGTTCAAGGAGGCGGTGGCTA 52626 || ||| | | ||| ||| || | |||| | | || || || || | | Sbjct 767650 GCCTGATCCTGATATT--ATT--GAAAGGATCATTA-CA--------GAAGCTGTCGAGA 767604 Query 52627 TCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAA---CGCGC 52683 |||| || || ||| | | |||||| || || | |||||||||||||| ||||| Sbjct 767603 TCGAGAAAAGGTATTTCATCGACGCGCTCCCCGTGGCTCTGCTGGGCATGAATGCCGCGC 767544 Query 52684 AGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCAGC 52743 | ||| ||||| | |||||||| || || | ||| |||| || ||| | Sbjct 767543 TG---ATGAATCAGTACGTTGAGTTTGTAGCAGACAGGCTGCTGGTCGCTCTTGGGAACA 767487 Query 52744 CAAAGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCA 52803 || |||||||| | | ||||||||||| |||||| | || |||||||| | || | Sbjct 767486 AGAAATACTTCAATGTTACTAATCCGTTTGACTTTATGGAAAATATTTCGCTGGCAGGAA 767427 Query 52804 AGACCAACTTTTTCGAGAAG 52823 | || ||||| || || ||| Sbjct 767426 AAACTAACTTCTTTGAAAAG 767407 >seq1 Length=2110500 Score = 123 bits (136), Expect = 2e-23 Identities = 336/503 (67%), Gaps = 45/503 (9%) Strand=Plus/Minus Query 52342 AAAAGGCTCAGTGGGCAATGAAGTGGAT-CGAGAGCGACACCGCC----ACGCTGGCCGA 52396 |||||||| ||||||| || | |||||| | ||| |||| || |||||| | Sbjct 1034290 AAAAGGCTGAGTGGGCCATCAGGTGGATTCAAGAT-GACAATGCTCTTTACGCTG----A 1034236 Query 52397 GCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTTTGCCGCCAT 52456 | | ||||||| || ||| ||| || || | ||||| || || |||||||| || Sbjct 1034235 GAGGTTGGTGGCATTTGCCGCAGTAGAAGGTATCTTTTTCTCGGGGTCGTTTGCCGCAAT 1034176 Query 52457 CTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGAGTTGATATC 52516 ||||| | |||| |||||| | ||||| |||||||| || ||||||||||| | Sbjct 1034175 CTTTTGGCTCAAAAAGAAAGGTCTCATGCCTGGCCTGACCTTTTCAAACGAGTTGATCTG 1034116 Query 52517 GCGCGACGAAGGACTGCACACGGACTTTGCGTGCCT----------CTACTACAAGACGC 52566 | || || ||| ||||||| |||||||| ||||| | ||| || Sbjct 1034115 TAGAGATGAGGGATTGCACACAGACTTTGCTTGCCTAATGTTTTCCCATCTAAGGAACAA 1034056 Query 52567 GCGTGACCGAAAAATTGGATTCGGACACGATCCTGAGCATGTTCAAGGAGGCGGTGGCTA 52626 || ||||| | ||| ||| || | ||| | || | || || || | | Sbjct 1034055 GCCTGACCCGGATATT--ATT--GAAAGGAT--------TATT-ACAGAAGCTGTCGAGA 1034009 Query 52627 TCGA-AAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAA---CGCG 52682 |||| ||| || | ||| | | ||| || || || | |||||||||||||| |||| Sbjct 1034008 TCGAGAAAAGA-TATTTCATTGACGCACTCCCCGTGGCTCTGCTGGGCATGAATGCCGCG 1033950 Query 52683 CAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTC-GGGCA 52741 | | ||| ||||| | |||||||| || || | ||| |||| |||| ||| | Sbjct 1033949 CTG---ATGAATCAGTACGTTGAGTTTGTAGCAGACAGGCTGCTGGT--CGCTCTGGGGA 1033895 Query 52742 GCCA-AAGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGG 52800 | | || |||||||| | | ||||||||||| |||||| | || |||||||| | | Sbjct 1033894 ACAAGAAATACTTCAATGTTACTAATCCGTTTGATTTTATGGAGAATATTTCGCTGGCAG 1033835 Query 52801 GCAAGACCAACTTTTTCGAGAAG 52823 | || || ||||| || |||||| Sbjct 1033834 GAAAAACTAACTTCTTTGAGAAG 1033812 >seq14 Length=1283838 Score = 118 bits (130), Expect = 1e-21 Identities = 167/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 138384 GCAGCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTC 138443 ||| || |||| ||| | | || | ||| | | ||||||||||||||||||||||||| Sbjct 779428 GCAACCACCTCTCAATCTTAGGACAAGATGCAGGGTTGACTCCTTTTGAATGTTGTAGTC 779369 Query 138444 GCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGG 138503 | ||| | ||||| || || ||||| | |||| || | ||||||||| || Sbjct 779368 AGAAAGAGTTCTTCCATCCTCCAGCTGCTTACCTGCGAAGATCAGTCTCTGTTGGTCAGG 779309 Query 138504 AGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACT 138562 || ||||||||||| || ||| || |||| ||||| | | ||||| | |||| Sbjct 779308 TGGGATACCTTCTTTATCCTGGATCTTCGACTTTACATTGT-CGATAGTGTCAGAAGACT 779250 Query 138563 CCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 | ||||| | ||| | || |||||||| || || || |||||||||||||| Sbjct 779249 CTACCTCCAGCGTAATAGTCTTACCAGTAAGGGTCTTGACAAAAATCTGCAT 779198 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| || | |||||| | || | | | || || ||||||||||||||||| Sbjct 778968 CCACCTCTTAATCTCAAAACCAGGTGCAGGGTAGATTCTTTTTGAATGTTGTAGTCAGAA 778909 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| | ||||| || || ||||| | |||| || | ||||||||| || || Sbjct 778908 AGAGTTCTTCCATCCTCCAGCTGCTTACCTGCGAAGATCAGTCTCTGTTGGTCAGGTGGA 778849 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCAC 138566 ||||||||||| || ||| || |||| ||||| | | ||||| | ||||| || Sbjct 778848 ATACCTTCTTTATCCTGGATCTTCGACTTTACATTGT-CGATAGTGTCAGAAGACTCTAC 778790 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||| | ||| | || |||||||| || || || |||||||||||||| Sbjct 778789 CTCCAGCGTAATAGTCTTACCAGTAAGGGTCTTGACAAAAATCTGCAT 778742 Score = 87.8 bits (96), Expect = 2e-12 Identities = 160/232 (69%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| || | |||||| | ||| | | |||| || ||||| || ||||| || | Sbjct 778740 CCACCTCTTAATCTCAAAACCAGATGCAGGGTTGATTCTTTTTGGATATTGTAATCAGAC 778681 Query 138448 ATAGTAC-GCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | ||| | || | ||||| | ||||| || | | |||||| | || || || || || Sbjct 778680 AAAGTTCTGCCA-TCCTCTAACTGTTTTCCTGCAAAGATTAACCTTTGCTGATCAGGTGG 778622 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 ||||||||||| || ||| || || | | || | ||||| | || || || Sbjct 778621 GATACCTTCTTTATCTTGGATCTTCGACTTCACGTTGTCGATAGTGTCAGAGGATTCAAC 778562 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATGGCT 138618 ||| | || | || |||||||| ||||| || ||||||||||||||| || Sbjct 778561 CTCAAGTGTAATAGTCTTACCAGTAAGAGTCTTAACAAAAATCTGCATGTCT 778510 Score = 84.2 bits (92), Expect = 2e-11 Identities = 158/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| || | |||||| | || | | | || || ||||||||||| ||||| Sbjct 779196 CCACCTCTTAATCTCAAAACCAGGTGCAGGGTAGATTCTTTTTGAATGTTATAGTCAGAA 779137 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| | ||||| || || ||||| | | |||| | | ||||||||| || || Sbjct 779136 AGAGTTCTTCCATCCTCCAGCTGCTTACCAGCAAAGATCAATCTCTGTTGGTCGGGCGGA 779077 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCA 138565 || || || ||||| ||| | || | || | |||| | | ||||| | || || | Sbjct 779076 ATGCCCTCCTTGTCC-TGAATCTTCGACTTCACGTTGT-CGATTGTGTCAGAGGATTCAA 779019 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| | || | || |||||||| ||||| || |||||||||||||| Sbjct 779018 CCTCAAGTGTTATAGTCTTACCAGTAAGAGTCTTAACAAAAATCTGCAT 778970 >seq9 Length=2005801 Score = 100 bits (110), Expect = 3e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 138402 CAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTC 138461 |||||| | ||| | ||||||| ||||||||||| ||||| | ||| | || Sbjct 503093 CAAAACCAGATGCAAAGTTGACTCTTTTTGAATGTTATAGTCAGATAGAGTTCTTCCATC 503152 Query 138462 CTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTC 138521 ||| || || ||||| | | |||| | | |||||||| || || ||||||||||| || Sbjct 503153 CTCCAGCTGCTTACCTGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCTTTATC 503212 Query 138522 GGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGT 138581 ||| || |||| | || | ||||| | ||||||||||| | || | || Sbjct 503213 TTGGATCTTCGACTTTACGTTGTCGATAGTGTCAGAAGACTCCACCTCTAATGTAATAGT 503272 Query 138582 TTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||||| |||| ||||| |||||||||||||| Sbjct 503273 CTTACCGGTCAATGTTTTAACAAAAATCTGCAT 503305 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 138402 CAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTC 138461 |||||| || || | ||||||| ||||||||||| ||||| || ||| | || Sbjct 502409 CAAAACCAAGTGCAAAGTTGACTCTTTTTGAATGTTATAGTCAGACAGAGTTCTTCCATC 502468 Query 138462 CTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTC 138521 ||| || || ||||| | | |||| | | |||||||| || || ||||||||||| || Sbjct 502469 CTCCAGCTGCTTACCTGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCTTTATC 502528 Query 138522 GGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGT 138581 ||| || |||| | || | ||||| | || || ||||| | || | || Sbjct 502529 CTGGATCTTCGACTTTACGTTGTCGATAGTGTCAGAGGATTCAACCTCAAGTGTAATAGT 502588 Query 138582 TTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||||||| ||||| || ||||| |||||||| Sbjct 502589 CTTACCAGTAAGAGTCTTAACAAATATCTGCAT 502621 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/206 (71%), Gaps = 4/206 (2%) Strand=Plus/Plus Query 138411 ATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTG 138470 ||||| | | ||||| ||||||||||||||||| | ||| | ||||| ||||| Sbjct 502190 ATGTAGGGTCGACTCTTTTTGAATGTTGTAGTCAGAAAGAGTTCTTCCATCCTCCAGTTG 502249 Query 138471 TTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTT 138530 ||||| | | |||| | | ||||||||| || || || || || ||||| ||| | | Sbjct 502250 CTTACCTGCAAAGATCAATCTCTGTTGGTCGGGCGGAATGCCCTCCTTGTC-CTGAATCT 502308 Query 138531 TTGTTTT--AATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCA 138588 | | ||| |||| || | ||| || | || || || |||| || | || ||||| Sbjct 502309 TGGATTTGACATTG-TCAATGGTATCAGAGGATTCAACTTCGAGTGTAATAGTCTTACCG 502367 Query 138589 GTCAGAGTTTTTACAAAAATCTGCAT 138614 || ||||| || ||||| |||||||| Sbjct 502368 GTAAGAGTCTTAACAAATATCTGCAT 502393 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 138402 CAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTC 138461 |||||| | ||| | ||||||| ||||||||||| ||||| | ||| | || Sbjct 502637 CAAAACCAGATGCAAAGTTGACTCTTTTTGAATGTTATAGTCAGATAGAGTTCTTCCATC 502696 Query 138462 CTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTC 138521 ||| || || ||||| | | |||| | | |||||||| || || ||||||||||| || Sbjct 502697 CTCCAGCTGCTTACCTGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCTTTATC 502756 Query 138522 GGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGT 138581 ||| || |||| | || | ||||| | || || ||||| | || | || Sbjct 502757 CTGGATCTTCGACTTTACGTTGTCGATAGTGTCAGAGGATTCAACCTCAAGTGTAATAGT 502816 Query 138582 TTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||||||| ||||| || ||||| |||||||| Sbjct 502817 CTTACCAGTAAGAGTCTTAACAAATATCTGCAT 502849 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 138402 CAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTC 138461 |||||| | ||| | ||||||| ||||||||||| ||||| | ||| | || Sbjct 502865 CAAAACCAGATGCAAAGTTGACTCTTTTTGAATGTTATAGTCAGATAGAGTTCTTCCATC 502924 Query 138462 CTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTC 138521 ||| || || ||||| | | |||| | | |||||||| || || ||||||||||| || Sbjct 502925 CTCCAGCTGCTTACCTGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCTTTATC 502984 Query 138522 GGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGT 138581 ||| || |||| | || | ||||| | || || ||||| | || | || Sbjct 502985 CTGGATCTTCGACTTTACGTTGTCGATAGTGTCAGAGGATTCAACCTCAAGTGTAATAGT 503044 Query 138582 TTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||||||| ||||| || ||||| |||||||| Sbjct 503045 CTTACCAGTAAGAGTCTTAACAAATATCTGCAT 503077 >seq16 Length=1240939 Score = 84.2 bits (92), Expect = 2e-11 Identities = 97/131 (74%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 57307 ACGTTGCCCAAGTCGCCGACGTGCCGCACGGCCGCGTTGGGAGCGCCGTGTTCGCTGCCG 57366 || ||||||| |||||||||||||| ||| | || | ||||| |||||| |||| Sbjct 605682 ACATTGCCCAGGTCGCCGACGTGCCTCACATCGGCCTCAGGAGCACCGTGTGTCTTGCCT 605741 Query 57367 GTGGGGTTAAAGTGCTCGCCCGCCGACGTGCAGCCGTTGCTGGTGTCGCCGAACTCGTGA 57426 |||||||||||| || || || || || ||||| || |||| ||||||||||| Sbjct 605742 AGGGGGTTAAAGTGAGGACCGGCAGATGTACACCCGTTAGTGTTGTCACCGAACTCGTGG 605801 Query 57427 ACGTGAAATCC 57437 | ||| || || Sbjct 605802 ATGTGGAACCC 605812 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496262288340960