Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20parabailii_20[genbank_20GCA_5F001984395.2_202017 -03-16] 18 sequences; 20,864,403 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq14 145 2e-29 seq6 120 7e-22 seq9 118 2e-21 seq4 96.9 8e-15 seq10 87.8 4e-12 >seq14 Length=1283838 Score = 145 bits (160), Expect = 2e-29 Identities = 160/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||| |||||||| || || || ||||||||||| | ||||||||||| | ||| ||||| Sbjct 779413 TCTTAGGACAAGATGCAGGGTTGACTCCTTTTGAATGTTGTAGTCAGAAAGAGTTCTTCC 779354 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 ||| ||||||||||| || |||||||| || | ||| ||||| || || |||||| Sbjct 779353 ATCCTCCAGCTGCTTACCTGCGAAGATCAGTCTCTGTTGGTCAGGTGGGATACCTTCTTT 779294 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 ||||| ||||| ||| || |||| ||||| | | ||||| |||| ||| || Sbjct 779293 ATCCTGGATCTTCGACTTTACATTGTCGATAGTGTCAGAAGACTCTACCTCCAGCGTAAT 779234 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||||||| || || || || |||||||| || Sbjct 779233 AGTCTTACCAGTAAGGGTCTTGACAAAAATCTG 779201 Score = 136 bits (150), Expect = 9e-27 Identities = 158/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||||| || ||||| || || || || ||||| | ||||||||||| | ||| ||||| Sbjct 778957 TCTCAAAACCAGGTGCAGGGTAGATTCTTTTTGAATGTTGTAGTCAGAAAGAGTTCTTCC 778898 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 ||| ||||||||||| || |||||||| || | ||| ||||| || ||| |||||| Sbjct 778897 ATCCTCCAGCTGCTTACCTGCGAAGATCAGTCTCTGTTGGTCAGGTGGAATACCTTCTTT 778838 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 ||||| ||||| ||| || |||| ||||| | | ||||| |||| ||| || Sbjct 778837 ATCCTGGATCTTCGACTTTACATTGTCGATAGTGTCAGAAGACTCTACCTCCAGCGTAAT 778778 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||||||| || || || || |||||||| || Sbjct 778777 AGTCTTACCAGTAAGGGTCTTGACAAAAATCTG 778745 Score = 123 bits (136), Expect = 6e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||||| || ||||| || || || || ||||| | ||| ||||||| | ||| ||||| Sbjct 779185 TCTCAAAACCAGGTGCAGGGTAGATTCTTTTTGAATGTTATAGTCAGAAAGAGTTCTTCC 779126 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 ||| ||||||||||| || || ||||| | | ||| ||||| || ||| || || Sbjct 779125 ATCCTCCAGCTGCTTACCAGCAAAGATCAATCTCTGTTGGTCGGGCGGAATGCCCTCCTT 779066 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 ||||||||||| ||||||| |||| ||||| | | ||| || || | || || Sbjct 779065 GTCCTGAATCTTCGACTTCACGTTGTCGATTGTGTCAGAGGATTCAACCTCAAGTGTTAT 779006 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||||||| || ||||| || |||||||| || Sbjct 779005 AGTCTTACCAGTAAGAGTCTTAACAAAAATCTG 778973 >seq6 Length=1007293 Score = 120 bits (132), Expect = 7e-22 Identities = 158/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||||| ||| | ||| | || || |||||||||| ||||||||||| |||||| || || Sbjct 101402 TCTCAAGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCC 101343 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 ||| |||| |||||| || ||||| || | | ||||||||| || ||| || || Sbjct 101342 ATCCTCCAACTGCTTACCAGCGAAAATCAATCTCTGCTGGTCAGGTGGAATACCCTCCTT 101283 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 || |||||||| ||| || || | ||||| | | ||| || ||||| ||||| Sbjct 101282 GTCTTGAATCTTAGACTTGACATTGTCAATAGTGTCGGAGGATTCGACCTCCAAAGTGAT 101223 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTGGTACAT 199632 |||||||| || | ||| || || ||| | || || || Sbjct 101222 GGTCTTACCAGTCAAAGTCTTGACGAAACTGTGATAAAT 101184 >seq9 Length=2005801 Score = 118 bits (130), Expect = 2e-21 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 199412 AGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTT 199471 ||||||| || | ||| | ||| ||||| ||||| | ||| ||||||| || ||| ||| Sbjct 502404 AGTCTCAAAACCAAGTGCAAAGTTGACTCTTTTTGAATGTTATAGTCAGACAGAGTTCTT 502463 Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531 ||||| ||||||||||| || || ||||| | | || ||||| || || |||||| Sbjct 502464 CCATCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCT 502523 Query 199532 CGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTG 199591 ||||| ||||| ||| ||| |||| ||||| | | ||| || || | || Sbjct 502524 TTATCCTGGATCTTCGACTTTACGTTGTCGATAGTGTCAGAGGATTCAACCTCAAGTGTA 502583 Query 199592 ATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || |||||||| || ||||| || ||||| || || Sbjct 502584 ATAGTCTTACCAGTAAGAGTCTTAACAAATATCTG 502618 Score = 113 bits (124), Expect = 1e-19 Identities = 154/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 199412 AGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTT 199471 ||||||| || || || | ||| ||||| ||||| | ||| ||||||| | ||| ||| Sbjct 502632 AGTCTCAAAACCAGATGCAAAGTTGACTCTTTTTGAATGTTATAGTCAGATAGAGTTCTT 502691 Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531 ||||| ||||||||||| || || ||||| | | || ||||| || || |||||| Sbjct 502692 CCATCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCT 502751 Query 199532 CGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTG 199591 ||||| ||||| ||| ||| |||| ||||| | | ||| || || | || Sbjct 502752 TTATCCTGGATCTTCGACTTTACGTTGTCGATAGTGTCAGAGGATTCAACCTCAAGTGTA 502811 Query 199592 ATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || |||||||| || ||||| || ||||| || || Sbjct 502812 ATAGTCTTACCAGTAAGAGTCTTAACAAATATCTG 502846 Score = 113 bits (124), Expect = 1e-19 Identities = 154/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 199412 AGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTT 199471 ||||||| || || || | ||| ||||| ||||| | ||| ||||||| | ||| ||| Sbjct 502860 AGTCTCAAAACCAGATGCAAAGTTGACTCTTTTTGAATGTTATAGTCAGATAGAGTTCTT 502919 Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531 ||||| ||||||||||| || || ||||| | | || ||||| || || |||||| Sbjct 502920 CCATCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCT 502979 Query 199532 CGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTG 199591 ||||| ||||| ||| ||| |||| ||||| | | ||| || || | || Sbjct 502980 TTATCCTGGATCTTCGACTTTACGTTGTCGATAGTGTCAGAGGATTCAACCTCAAGTGTA 503039 Query 199592 ATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || |||||||| || ||||| || ||||| || || Sbjct 503040 ATAGTCTTACCAGTAAGAGTCTTAACAAATATCTG 503074 Score = 109 bits (120), Expect = 1e-18 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||| || ||||| || || |||||||| ||||| | ||||||||||| | ||| ||||| Sbjct 502178 TCTTAGCACAAGATGTAGGGTCGACTCTTTTTGAATGTTGTAGTCAGAAAGAGTTCTTCC 502237 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 ||| ||||| ||||| || || ||||| | | ||| ||||| || ||| || || Sbjct 502238 ATCCTCCAGTTGCTTACCTGCAAAGATCAATCTCTGTTGGTCGGGCGGAATGCCCTCCTT 502297 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 ||||||||||| || || || | ||| || | | ||| || || | || || Sbjct 502298 GTCCTGAATCTTGGATTTGACATTGTCAATGGTATCAGAGGATTCAACTTCGAGTGTAAT 502357 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||||||| || ||||| || ||||| || || Sbjct 502358 AGTCTTACCGGTAAGAGTCTTAACAAATATCTG 502390 Score = 109 bits (120), Expect = 1e-18 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 199412 AGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTT 199471 ||||||| || || || | ||| ||||| ||||| | ||| ||||||| | ||| ||| Sbjct 503088 AGTCTCAAAACCAGATGCAAAGTTGACTCTTTTTGAATGTTATAGTCAGATAGAGTTCTT 503147 Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531 ||||| ||||||||||| || || ||||| | | || ||||| || || |||||| Sbjct 503148 CCATCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCT 503207 Query 199532 CGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTG 199591 || || ||||| ||| ||| |||| ||||| | | || || || || || Sbjct 503208 TTATCTTGGATCTTCGACTTTACGTTGTCGATAGTGTCAGAAGACTCCACCTCTAATGTA 503267 Query 199592 ATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || |||||||| || | ||||| |||||||| || Sbjct 503268 ATAGTCTTACCGGTCAATGTTTTAACAAAAATCTG 503302 Score = 86.0 bits (94), Expect = 1e-11 Identities = 76/95 (80%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 200930 AAAAACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACG 200989 ||| | | |||||||| || ||||||||||| ||||| || ||||| | |||||||| Sbjct 503412 AAAGATTGATCTTCGCAGGTAAGCAGTTGGAGGATGGCAGAACTTTATCTGATTACAATA 503353 Query 200990 TCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 201024 |||| || || || ||||| ||||| ||||||||| Sbjct 503352 TCCAAAAGGAATCAACTCTACACCTCGTTTTGAGA 503318 >seq4 Length=1091360 Score = 96.9 bits (106), Expect = 8e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||| || || | ||| | ||| || ||||| |||| ||| ||||||| ||| || || || Sbjct 719729 TCTAAGCACCAAGTGCAAAGTGGATTCCTTCTGGATGTTATAGTCAGACAACGTTCTGCC 719788 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 ||| |||| ||||| || |||||||| | | ||||||||| || || ||||| Sbjct 719789 ATCCTCCAATTGCTTACCAGCGAAGATCAATCTCTGCTGGTCAGGTGGGATACCTTCCTT 719848 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 || |||||||| ||| || |||| ||||| | | || || || | || || Sbjct 719849 GTCTTGAATCTTGGACTTAACATTGTCGATAGTGTCAGAAGACTCGACTTCGAGGGTAAT 719908 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||||||||| | || || || ||||| || Sbjct 719909 AGTCTTACCCGTCAAGGTCTTGACGAAAATCTG 719941 >seq10 Length=1751495 Score = 87.8 bits (96), Expect = 4e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||| || || | ||| | || || ||||| || | ||| ||||||| ||| || || || Sbjct 575201 TCTAAGCACCAAGTGCAAGGTAGATTCCTTCTGAATGTTATAGTCAGACAAGGTTCTGCC 575260 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 ||| |||| ||||| || || ||||| | | |||||| || || ||| ||||| Sbjct 575261 ATCCTCCAATTGCTTACCAGCAAAGATCAATCTCTGCTGATCAGGTGGAATACCTTCCTT 575320 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 || ||||||||| ||| || |||| ||||| | | || || || | || || Sbjct 575321 GTCTTGAATCTTTGACTTGACATTGTCGATAGTGTCAGAAGACTCGACTTCAAGGGTAAT 575380 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||||||||| | || || || ||||| || Sbjct 575381 AGTCTTACCCGTCAAGGTCTTGACGAAAATCTG 575413 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178921328111206