Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20parabailii_20[genbank_20GCA_5F001984395.2_202017 -03-16] 18 sequences; 20,864,403 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq14 208 9e-49 seq9 208 9e-49 seq6 93.3 5e-14 seq12 91.5 2e-13 seq11 82.4 9e-11 >seq14 Length=1283838 Score = 208 bits (230), Expect = 9e-49 Identities = 552/833 (66%), Gaps = 15/833 (2%) Strand=Plus/Minus Query 106457 GGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAA 106516 ||||| || || || |||| ||| ||||| || | ||||||||||| | ||| || | | Sbjct 991409 GGAAGAGCAATAGAAGCCAGATTACAAACTGCAGATTCATCCTTATCGGAGTATTCAACA 991350 Query 106517 ATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTG 106576 ||||| ||| | ||||| || ||| |||| ||||||||||||||||| | | Sbjct 991349 ATTTCACAACAAAGATTGGATGATTTGATCACACCCAGGTTCTTTTGGTTACTCTTCTCG 991290 Query 106577 TTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATT 106636 ||||| ||||| ||||| | ||| | || || || || || ||||| | | ||| || Sbjct 991289 TTGCAAGCATCTTTGTACAACATAAAAGGTGTACCAGTTTCTGTCTGAGCTTCGAGGATG 991230 Query 106637 GCCTTCCACA-CATCGGCGGCTGGTACAATGGCGTTGG--CCCGTCCCTCCGCCTCGTAC 106693 || | ||||| | || | | | | | || | || |||| || ||| ||| || Sbjct 991229 GCGTACCACAACTTCTGAGCCCTG---ATTGTCTTTCTACCCCGCCCTTCCCGCTCATAT 991173 Query 106694 TTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCT 106753 || || ||||||||||| | || |||| || | |||||| || | | Sbjct 991172 CGCTCATATAGCGCTTCAAACTCTTTCCCGTAAACGTCAGATAAACCTGGCGCTTCGCTA 991113 Query 106754 GGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATC 106813 || ||||||||| ||||| || || || || || ||||| || | ||| | |||| Sbjct 991112 GGGGAGAAAAGAGTCCATTCTCCGTTCTGTTCTACACGTTTCATAAATAAGTCGGAAATC 991053 Query 106814 CACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAA- 106872 || | | || ||| | |||||| ||| ||| || | ||| || || || ||| Sbjct 991052 CATAATGCTGGAAACAAATCTCTGGCGCGAATCTCCTCCTTACCGTGATT-CTTCCTAAT 990994 Query 106873 CTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC--- 106929 || | ||| || | ||||| |||||||| ||||| | ||| | || | || || Sbjct 990993 GTCGATGAAGTCGAAAATATCTGCGTGCCAAGGCTCCAAATATAGGGCAAAAGCGCCTGG 990934 Query 106930 -CTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTG 106988 |||| | ||| |||| | ||||| | || || ||||| || |||| ||| | Sbjct 990933 TCTTT-TATTACCACCTTGGTCCACATACCTAGCGGTATTATTAAAGACACGAATCATAG 990875 Query 106989 GAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACAT 107048 | || | |||| ||| |||||| || || |||| || | ||| | | || Sbjct 990874 GGATTAACCCATTAGATGTACCATTGGTACCAGCAATATACGAACCAGTGGAGCGGATAT 990815 Query 107049 CATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAG 107108 ||||| |||| |||||||| ||||| ||| || || ||||| || | |||| Sbjct 990814 TGTGGATATGCAAACCAATACCACCAGCAGTCTTGGAAATCATAGCACATTCTTTGAGAG 990755 Query 107109 TTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCT 107168 | |||||||||| | ||| || || || || |||| | ||||| ||| | ||||| Sbjct 990754 TGTCATAGATACCCTCGATAGAATCATCTTTCATGGCTACCAGGAAACAAGAAGCCATCT 990695 Query 107169 GCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTT-GG 107227 | || ||| || || |||||||| || || || | || |||||||| ||||||| Sbjct 990694 GAGGATGTGGAGTTCCTGCATTGAATAGCGTAGGGGAAGCATGAATGAA-ATACCTTAAA 990636 Query 107228 GACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCC 107280 ||||| || ||| ||||| | | | | | ||| || || ||||| ||||| Sbjct 990635 GACATGAGGTTGTAAGTCTCAATGGCTGCCTTAATATCATCACCGTGAATGCC 990583 >seq9 Length=2005801 Score = 208 bits (230), Expect = 9e-49 Identities = 552/833 (66%), Gaps = 15/833 (2%) Strand=Plus/Plus Query 106457 GGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAA 106516 ||||| || || || |||| ||||||||| || | ||||||||||| | ||| || | | Sbjct 289567 GGAAGCGCAATAGAAGCCAGATTGCAAACTGCAGATTCATCCTTATCGGAGTATTCAACA 289626 Query 106517 ATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTG 106576 ||||| ||| | ||||| |||||| |||| ||||||||||||||||| | Sbjct 289627 ATTTCACAACAAAGATTGGATGATTTAATCACACCCAGGTTCTTTTGGTTACTCTTCTCA 289686 Query 106577 TTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATT 106636 ||||| ||||||||||| | ||| | || || || || || ||||| | | ||| || Sbjct 289687 TTGCAAGCATCCTTGTATAACATAAAAGGTGTACCAGTTTCTGTCTGAGCTTCGAGGATG 289746 Query 106637 GCCTTCCACA-CATCGGCGGCTGGTACAATGGCGTTGGCCC--GTCCCTCCGCCTCGTAC 106693 || | ||||| | || | | | | || | || || | || || ||| || Sbjct 289747 GCGTACCACAACTTCTGAGCCCTT---ATTGTCTTTCTACCACGCCCTTCTTGCTCATAT 289803 Query 106694 TTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCT 106753 || || || ||||||||||| | || | || || | |||||| || | | Sbjct 289804 CTTTCATATAGCGCTTCAAACTCTTTCCCGTAAACATCAGATAAACCTGGCGCTTCGCTA 289863 Query 106754 GGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATC 106813 || ||||||| | ||||| || || || || |||||||| || | ||| | |||| Sbjct 289864 GGGGAGAAAAGGGTCCATTCTCCGTTCTGTTCTACACGCTTCATAAATAAGTCGGAAATC 289923 Query 106814 CACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAA- 106872 || | | || ||| | |||||| ||| ||| || | ||| || || || ||| Sbjct 289924 CATAACGCTGGAAACAAATCTCTGGCGCGAATCTCCTCCTTACCGTGATT-TTTCCTAAT 289982 Query 106873 CTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC--- 106929 || | || || | ||||| |||||||| ||||| | ||| | || | || || Sbjct 289983 GTCGATAAAATCAAAAATATCAGCGTGCCAGGGCTCCAAATATAGGGCAAAAGCGCCAGG 290042 Query 106930 -CTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTG 106988 |||| | ||| |||| | ||||| || || || ||||| || |||| ||| | Sbjct 290043 TCTTT-TATTACCACCTTGGTCCACATACCGAGCAGTATTATTAAAAACACGAATCATGG 290101 Query 106989 GAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACAT 107048 | || | |||| ||| ||| || || || |||| || | | | | | || Sbjct 290102 GGATTAGTCCATTAGATGTACCGTTGGTACCAGCAATATACGAACCAGTTGAACGGATAT 290161 Query 107049 CATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAG 107108 ||||| |||| |||||||| ||||| ||| ||||| ||||| || | |||| Sbjct 290162 TGTGGATATGCAAACCAATACCACCAGCAGTCTTGGAGATCATAGCACATTCTTTTAGAG 290221 Query 107109 TTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCT 107168 | |||||||||| | ||| ||||| || || |||| | ||||||||| | ||||| Sbjct 290222 TGTCATAGATACCCTCGATAGAGTCATCTTTCATGGCTACCAGGAAGCAAGAAGCCATCT 290281 Query 107169 GCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTT-GG 107227 | || ||| || || |||||||| || || || | ||||| ||||| ||||||| | Sbjct 290282 GAGGATGTGGGGTTCCTGCATTGAATAGCGTAGGGGAAGCGTGGATGAA-ATACCTTAGA 290340 Query 107228 GACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCC 107280 ||||| || ||| ||||| | | | | ||| || || || || ||||| Sbjct 290341 GACATTAGGTTGTAAGTCTCAATAGCTGCCTTAATATCATCACCATGAATGCC 290393 >seq6 Length=1007293 Score = 93.3 bits (102), Expect = 5e-14 Identities = 110/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 106469 GATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACAC 106528 ||||| |||||||||||||| ||||||| | | ||||||||| ||||| ||| Sbjct 907852 GATGCTAAATTGCAAACAGCTGTCTCATTTTCAGAACTGTACTCTACTATTTCACAACAG 907911 Query 106529 AAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCC 106588 | |||||| || ||||| || ||||| |||||||| || |||||| ||||| Sbjct 907912 AGGTTGGAGGATTTGATCGTGCCTAAATTTTTTTGGTTCGATTTAGAGTTGCAAACATCC 907971 Query 106589 TTGTAGAGCATGTAGGGCGTCCCCGTCTC 106617 |||||||||||| | ||| || ||||| Sbjct 907972 TTGTAGAGCATGAAAGGCCCTCCTGTCTC 908000 >seq12 Length=1443312 Score = 91.5 bits (100), Expect = 2e-13 Identities = 193/282 (68%), Gaps = 6/282 (2%) Strand=Plus/Plus Query 9362 CTTTCCCACGGCATCAATCTCATCAATGAAGACAATACATGGTTG--ATTTTCGCGGGCG 9419 ||| || | ||| || |||||||| | |||| ||| | ||| | |||| | | ||| Sbjct 1209792 CTTACCAATGGCGTCGATCTCATCGACAAAGATAATGC-TGGGAGCCATTTGC-CTGGCC 1209849 Query 9420 ATTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTT 9479 ||||| | || |||||||| ||||| ||||| || |||||||| || || | | Sbjct 1209850 TGCTCAAACATGTCACGAACCCTGGAAGCGCCTACACCTACGAACATCTCGACGAATTCT 1209909 Query 9480 GCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAG 9538 | | | || || | || |||||| || || ||||| || |||| || | || Sbjct 1209910 GAGCCCGA-CACCGAGAGGAAGGGCACGCCAGCCTCACCAGCCGTGGCCTTAGCCAACAG 1209968 Query 9539 AGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCCCGTGGAATCTTGGCGCCACT 9598 |||||||| ||||| || || | ||| | |||||| || ||||||||||| || Sbjct 1209969 CGTCTTACCGGTACCGGGAGGCCCAGAGAGAATGGCACCACGCGGAATCTTGGCCCCCAG 1210028 Query 9599 TCCAAAGTATCTCTCAGGTTGCTTGAGAAAATCCACAATCTC 9640 || ||| | || |||||||| ||||||| ||||| ||| Sbjct 1210029 GGCAGTGTAGCGCTGTGGTTGCTTCAGAAAATGCACAAACTC 1210070 Score = 87.8 bits (96), Expect = 2e-12 Identities = 117/163 (72%), Gaps = 0/163 (0%) Strand=Plus/Plus Query 155054 TTGCACCACGATCCGGTCTCGCTGTGAAGCATGGTATTCAAGTTGGTGCGGGTGTTATTG 155113 |||| || || || || || || || |||||||| || ||| ||||| ||||| | | Sbjct 1215232 TTGCCCCTCGTTCAGGACTTGCCGTCAAGCATGGGATCCAAACGGGTGCCGGTGTGGTCG 1215291 Query 155114 ATCCCGACTATACAGGTGAAGTCAAAGTCGTTCTCTTCAATCACGGAGACAAAGACTTTG 155173 || ||||| || ||||| || ||||| ||||||||||||||| ||| ||||| Sbjct 1215292 ATAGGGACTACACGGGTGAGGTTAAAGTGGTTCTCTTCAATCACTCCGACCGCGACTTCC 1215351 Query 155174 AGGTAAAGAAAGGGGATCGCATCGCACAACTTGTCCTTGAGCG 155216 |||| || |||| || || | || ||| | |||| ||||| Sbjct 1215352 AGGTGAACCAAGGTGACCGGGTGGCCCAATTGATCCTCGAGCG 1215394 >seq11 Length=1516135 Score = 82.4 bits (90), Expect = 9e-11 Identities = 110/152 (72%), Gaps = 6/152 (4%) Strand=Plus/Plus Query 106469 GATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTG---TGTACTCTAAAATTTCTGTA 106525 ||||| ||||| |||||||||||| ||||| || | ||||||| | ||||| | Sbjct 236803 GATGCTAAATTACAAACAGCCGTC---TCCTTTTCAGAACTGTACTCAACTATTTCACAA 236859 Query 106526 CACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCA 106585 || | |||||| || ||||| |||| ||| |||||||| || |||||| || Sbjct 236860 CAGAGGTTGGAGGATTTGATCGTGCCCAGATTTTTTTGGTTCGATTTAGAGTTGCAAACA 236919 Query 106586 TCCTTGTAGAGCATGTAGGGCGTCCCCGTCTC 106617 |||||||| ||||| | ||| ||| ||||| Sbjct 236920 TCCTTGTAAAGCATAAAAGGCACCCCTGTCTC 236951 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589980667254320