Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20parabailii_20[genbank_20GCA_5F001984395.2_202017 -03-16] 18 sequences; 20,864,403 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq12 98.7 1e-15 seq1 87.8 2e-12 >seq12 Length=1443312 Score = 98.7 bits (108), Expect = 1e-15 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 153783 CCTATGGGATATGGAGGTCCTCATGCTGCATTCTTTGCAACAACAGACAAGTATAAGAGA 153842 || ||||||||||| ||||| |||||||| || |||||| | || || | || ||| Sbjct 1069846 CCCATGGGATATGGTGGTCCCCATGCTGCCTTTTTTGCAGTTGCTGATAAATGGAACAGA 1069905 Query 153843 AAGATACCTGGCAGAATTGTAGGTCAGTCAGTAGATAGTGAAGGTAATAAAGCATACAGA 153902 ||||| || || ||||| ||| || |||| | || || | |||| | Sbjct 1069906 CGTATACCGGGAAGGATTGTGGGTGTCTCCAAAGATCGCTTGGGAAAGACTGCATTACGT 1069965 Query 153903 TTAGCACTACAGACTAGAGAGCAGCATATCAGGAGAGACAAAGCAACCAGTAACATCTGC 153962 ||||| ||||| || ||||||||||||| | | ||||| |||||| || |||||| Sbjct 1069966 TTAGCTCTACAAACACGAGAGCAGCATATTAAACGCGACAAGGCAACCTCCAATATCTGC 1070025 Query 153963 ACAGCTCAGGCACTGCTGGCTAAT 153986 || || ||||| ||||| || ||| Sbjct 1070026 ACTGCGCAGGCGCTGCTAGCGAAT 1070049 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 153203 TCTTATAGGTCAAGGATACTATGGAACCATTACACCCCCAGTCATACAGCGAAACGTTCT 153262 ||| || || |||||||||||||||| | || || || || | |||| || | Sbjct 1069245 TCTCATTGGCAAAGGATACTATGGAACTGTGCTTCCGCCGGTGATTCTTAGAAATGTCTT 1069304 Query 153263 TGAGAATCCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAG 153322 |||| || |||||||| || || ||||| || ||| | || | ||||| || | Sbjct 1069305 GGAGAGCCCAGAATGGTACACTTCATATACTCCTTACCAACCGGAAGTCTCTCAAGGGCG 1069364 Query 153323 ATTGGAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTTACAGGATTACCAATAGC 153382 || || || | | || | ||| || | | | || | || |||||||| | || Sbjct 1069365 GTTAGAGTCTCTCCTGAACTTCCAGACTGTAGTTTCTGATTTAACCGGATTACCTGTTGC 1069424 Query 153383 AAACGCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATGCTATT 153433 ||| ||||| || |||||||| | |||||||||||| || |||||||| || Sbjct 1069425 AAATGCATCCCTTTTAGATGAGGGAACTGCAGCAGCTGAGGCAATGCTGTT 1069475 >seq1 Length=2110500 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 153203 TCTTATAGGTCAAGGATACTATGGAACCATTACACCCCCAGTCATACAGCGAAACGTTCT 153262 ||| || || |||||||||||||||| | || || || || | |||| || | Sbjct 735283 TCTCATTGGCAAAGGATACTATGGAACTGTGCTTCCACCGGTAATTCTTAGAAATGTCTT 735224 Query 153263 TGAGAATCCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAG 153322 |||| || |||||||| || || ||||| || ||| | || | ||||| || | Sbjct 735223 GGAGAGCCCAGAATGGTACACTTCATATACTCCTTACCAACCGGAAGTCTCTCAAGGGCG 735164 Query 153323 ATTGGAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTTACAGGATTACCAATAGC 153382 || || || | | || | ||| ||| | | | || | || |||||||| | | Sbjct 735163 GTTAGAGTCTCTCCTGAACTTCCAGACGATAGTTTCTGATTTAACCGGATTACCTGTTTC 735104 Query 153383 AAACGCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATGCTATT 153433 ||| ||||| || ||||||| | |||||||||||| || ||||||||||| Sbjct 735103 AAATGCATCCCTTCTAGATGAGGGAACTGCAGCAGCTGAGGCAATGCTATT 735053 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579212669677120