Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20parabailii_20[genbank_20GCA_5F001984395.2_202017 -03-16] 18 sequences; 20,864,403 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq14 132 3e-26 seq9 107 1e-18 seq10 84.2 1e-11 >seq14 Length=1283838 Score = 132 bits (146), Expect = 3e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 || || || || |||||||||| ||| | || |||||| |||||||||||||| ||| Sbjct 779196 CCACCTCTTAATCTCAAAACCAGGTGCAGGGTAGATTCTTTTTGAATGTTATAGTCAGAA 779137 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 || ||| | |||| |||||||| || || ||||| || | || || ||||| |||| Sbjct 779136 AGAGTTCTTCCATCCTCCAGCTGCTTACCAGCAAAGATCAATCTCTGTTGGTCGGGCGGA 779077 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | ||||||||||| ||||||| || ||| | || | ||| || ||||| Sbjct 779076 ATGCCCTCCTTGTCCTGAATCTTCGACTTCACGTTGTCGATTGTGTCAGAGGATTCAACC 779017 Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || | ||||| || || || || |||||||| ||||| ||||||||| Sbjct 779016 TCAAGTGTTATAGTCTTACCAGTAAGAGTCTTAACAAAAATCTGCATA 778969 >seq9 Length=2005801 Score = 107 bits (118), Expect = 1e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 ||||| |||||||| ||||| ||||| ||| | |||| ||||| || || || ||||| Sbjct 502203 TCTTTTTGAATGTTGTAGTCAGAAAGAGTTCTTCCATCCTCCAGTTGCTTACCTGCAAAG 502262 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || | || || ||||| |||| | ||||||||||| |||||| |||||| Sbjct 502263 ATCAATCTCTGTTGGTCGGGCGGAATGCCCTCCTTGTCCTGAATCTTGGATTTGACATTG 502322 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | ||| || ||||| |||| || || || || || || |||||||| ||| Sbjct 502323 TCAATGGTATCAGAGGATTCAACTTCGAGTGTAATAGTCTTACCGGTAAGAGTCTTAACA 502382 Query 34971 AAGATCTGCATA 34982 || ||||||||| Sbjct 502383 AATATCTGCATA 502394 Score = 102 bits (112), Expect = 5e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 34767 CTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCA 34826 |||||||||||||| | || ||||| |||||||||||||| || || ||| | || Sbjct 502407 CTCAAAACCAAGTGCAAAGTTGACTCTTTTTGAATGTTATAGTCAGACAGAGTTCTTCCA 502466 Query 34827 TCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34886 || |||||||| || || ||||| || | || ||| ||||| | || | || || || Sbjct 502467 TCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCTTTA 502526 Query 34887 TCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATG 34946 || |||||| || ||| | || | ||| || ||||| || | || || Sbjct 502527 TCCTGGATCTTCGACTTTACGTTGTCGATAGTGTCAGAGGATTCAACCTCAAGTGTAATA 502586 Query 34947 GTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || || || |||||||| ||||| ||||||||| Sbjct 502587 GTCTTACCAGTAAGAGTCTTAACAAATATCTGCATA 502622 Score = 93.3 bits (102), Expect = 3e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 34767 CTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCA 34826 |||||||||| || | || ||||| |||||||||||||| || || ||| | || Sbjct 502635 CTCAAAACCAGATGCAAAGTTGACTCTTTTTGAATGTTATAGTCAGATAGAGTTCTTCCA 502694 Query 34827 TCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34886 || |||||||| || || ||||| || | || ||| ||||| | || | || || || Sbjct 502695 TCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCTTTA 502754 Query 34887 TCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATG 34946 || |||||| || ||| | || | ||| || ||||| || | || || Sbjct 502755 TCCTGGATCTTCGACTTTACGTTGTCGATAGTGTCAGAGGATTCAACCTCAAGTGTAATA 502814 Query 34947 GTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || || || |||||||| ||||| ||||||||| Sbjct 502815 GTCTTACCAGTAAGAGTCTTAACAAATATCTGCATA 502850 Score = 93.3 bits (102), Expect = 3e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 34767 CTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCA 34826 |||||||||| || | || ||||| |||||||||||||| || || ||| | || Sbjct 502863 CTCAAAACCAGATGCAAAGTTGACTCTTTTTGAATGTTATAGTCAGATAGAGTTCTTCCA 502922 Query 34827 TCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34886 || |||||||| || || ||||| || | || ||| ||||| | || | || || || Sbjct 502923 TCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCTTTA 502982 Query 34887 TCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATG 34946 || |||||| || ||| | || | ||| || ||||| || | || || Sbjct 502983 TCCTGGATCTTCGACTTTACGTTGTCGATAGTGTCAGAGGATTCAACCTCAAGTGTAATA 503042 Query 34947 GTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || || || |||||||| ||||| ||||||||| Sbjct 503043 GTCTTACCAGTAAGAGTCTTAACAAATATCTGCATA 503078 >seq10 Length=1751495 Score = 84.2 bits (92), Expect = 1e-11 Identities = 162/237 (68%), Gaps = 8/237 (3%) Strand=Plus/Plus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 || || ||||| || | |||||||| | || ||| ||||||||||||||||| || Sbjct 575190 CCACCTCTCAATCTAAGCACCAAGTGCAAGGTAGATTCCTTCTGAATGTTATAGTCAGAC 575249 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 | | ||| |||| |||| || || || ||||| || | || ||||| || | || Sbjct 575250 AAGGTTCTGCCATCCTCCAATTGCTTACCAGCAAAGATCAATCTCTGCTGATCAGGTGGA 575309 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTC 34930 | || |||||||| |||||| ||||| || | ||||| ||| | ||| Sbjct 575310 ATACCTTCCTTGTCTTGAATCTTTGACTTGAC--AT--TGTCGATAGTGTCAGAAGACTC 575365 Query 34931 AACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATATTCGT 34987 || || | ||| || || || ||||| | ||||| || || |||||||| || || Sbjct 575366 GACTTCAAGGGTAATAGTCTTACCCGTCAAGGTCTTGACGAAAATCTGCATCTTGGT 575422 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324633528783504