Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20parabailii_20[genbank_20GCA_5F001984395.2_202017 -03-16] 18 sequences; 20,864,403 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq12 212 7e-50 seq1 208 9e-49 seq6 163 3e-35 seq11 132 5e-26 >seq12 Length=1443312 Score = 212 bits (234), Expect = 7e-50 Identities = 599/912 (66%), Gaps = 11/912 (1%) Strand=Plus/Plus Query 18670 TTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACAT 18729 ||||| || || | ||| || ||||||||||| ||||||||||| | | || ||| | Sbjct 767387 TTTTGGTAATCCGAAACCCTCTTTTCAAAGAAGTTAGTTTTTCCTGCCAGCGAAATATTT 767446 Query 18730 TCCATAAAATCAAATGGATTTTTTACATTATATAtttttttGAATCCTAATTCTAATAGT 18789 |||||||| ||||| ||||| | ||||| | ||| ||| || | | | || Sbjct 767447 TCCATAAAGTCAAACGGATTAGTAACATTGAAGTATTTCTTGTTCCCAAGAGCGACCAGC 767506 Query 18790 AGTCTATCCGCTACAAATTTAATATATGTGTTCATCATATCACAATTCATTCCTATTAAT 18849 || || || |||||||| | || || ||||||| | |||||| || | | Sbjct 767507 AGCCTGTCTGCTACAAACTCAACGTACTGATTCATCAGCGCGGCATTCATGCCCAGCAGA 767566 Query 18850 TTAACAGGTAGTGCATCTGTAAGAAATTCTTGTTCTATATTT--ACTGCCTCTGATATAA 18907 || || || || || | ||||| | | |||| || | || || |||| || | Sbjct 767567 GCCACGGGGAGCGCGTCGAT--GAAATACCTTTTCTCGATCTCGACAGCTTCTGTAATGA 767624 Query 18908 TAGATACAACTCTATCTTCATTAGGAGGGTATAGAAGATGTTTAAACATCAAACATGCAA 18967 | | ||| |||| || ||| || | ||||| |||||| | ||| |||| Sbjct 767625 TCCTTTCAATAATATCAGGATCAGGCTTGTTTCTTAGATGGGAAAACATTAGACAAGCAA 767684 Query 18968 AATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCA 19027 | || || | ||| || ||||||| || || || || ||||| || | || |||| Sbjct 767685 AGTCTGTGTGCAATCCTTCATCTCTACAGATTAACTCGTTTGAAAAGGTCAGGCCTGGCA 767744 Query 19028 TCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTT 19087 | || || | ||||| | ||| || || | ||||| ||||| || || || ||||||| Sbjct 767745 TGAGGCCCTTCTTTTTGAGCCAAAAGATGGCGGCAAAAGATCCCGAGAAAAAGATACCTT 767804 Query 19088 CTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGAATCCATT 19147 ||||||| ||||| || || || || || | ||| ||||| | || |||||||| Sbjct 767805 CTACTGCGGCAAATGCCACCAGCCTCTCAGCGTAAAGAGCATTGTCATCTTGAATCCACC 767864 Query 19148 TCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTAAATAGAT 19207 | | ||||| |||||||| | || | || || ||| || | |||||| | | Sbjct 767865 TGATAGCCCACTCAGCCTTTTCCTTGATCTGAGGGATGTGCTCAATCGCATTAAACA-AG 767923 Query 19208 ACAT-ACGCTCATCTGTATCTTTAACATATGCATCTATCAATAAACTGTACATTTCTGAA 19266 | || || || | | ||| || | |||| || || ||||| ||| | || ||| Sbjct 767924 AAATCCCGTTCCTTAGGATCCTTGATGTATGTCTCGATTAATAATGAGTAAGTCTCCGAA 767983 Query 19267 TGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCTGTACT 19326 || |||||||| || ||||| || ||||| |||||| | || |||| |||||| || Sbjct 767984 TGGATATTTTCCATCATGATCTGGAACCCGTAGAAACATTTGGCCTCTGGTATCTGAACC 768043 Query 19327 TCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAAAAAT 19386 || |||| | || || ||||| ||||| || ||||| ||| || ||||| || Sbjct 768044 TCTGCGGAAAAATTCTCAACTAAATTCTCATTGACAATTCCGTCAGATGCCGCAAAGAAA 768103 Query 19387 GCTAATACATGTTTA-ATAAAATGTTTTTCATCTGAGGTTAATGTATT---CCAATCATT 19442 |||| || | | | ||||| | | || || || | |||| ||||||||| Sbjct 768104 GCTAGGAC-TCTAGACATAAAGAATCTCTCGCCTTCTGTCATCCTATTTTCCCAATCATT 768162 Query 19443 AATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTTTTATA 19502 |||||||| || | || | || || | ||||| ||||| ||||| || |||| || Sbjct 768163 TATATCTTTCGACAGGTCAATCTCCTCTGCAGTCCAGAAAGATGCCTCCGCCCTTTTGTA 768222 Query 19503 CATGTTCCATATATCACGATATTGTATAGGAAATATAACAAATCTATTTTTATTTTCTTT 19562 | ||| || ||| |||| ||||| || | || || ||| ||| || || | Sbjct 768223 GGCCTGCCAAATCTCATGATACCTAATAGGGAAGAGCACGAACCTACGTTTGTTCTCAAT 768282 Query 19563 AAGAATAGGTTC 19574 ||| | ||||| Sbjct 768283 AAGCAATGGTTC 768294 >seq1 Length=2110500 Score = 208 bits (230), Expect = 9e-49 Identities = 599/912 (66%), Gaps = 11/912 (1%) Strand=Plus/Plus Query 18670 TTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACAT 18729 ||||| || || | ||| || || |||||||| ||||||||||| | | || ||| Sbjct 1033792 TTTTGGTAATCCGAAACCCTCTTCTCAAAGAAGTTAGTTTTTCCTGCCAGCGAAATATTC 1033851 Query 18730 TCCATAAAATCAAATGGATTTTTTACATTATATAtttttttGAATCCTAATTCTAATAGT 18789 |||||||||||||| ||||| | ||||| | ||| ||| || | | | || Sbjct 1033852 TCCATAAAATCAAACGGATTAGTAACATTGAAGTATTTCTTGTTCCCCAGAGCGACCAGC 1033911 Query 18790 AGTCTATCCGCTACAAATTTAATATATGTGTTCATCATATCACAATTCATTCCTATTAAT 18849 || || || |||||||| | || || ||||||| | |||||| || | | Sbjct 1033912 AGCCTGTCTGCTACAAACTCAACGTACTGATTCATCAGCGCGGCATTCATGCCCAGCAGA 1033971 Query 18850 TTAACAGGTAGTGCATCTGTAAGAAAT-TCTTGT-TCTATATTTACTGCCTCTGATATAA 18907 || || ||||| || | ||||| |||| | || || | || || |||| |||| Sbjct 1033972 GCCACGGGGAGTGCGTCAAT--GAAATATCTTTTCTCGATCTCGACAGCTTCTGTAATAA 1034029 Query 18908 TAGATACAACTCTATCTTCATTAGGAGGGTATAGAAGATGTTTAAACATCAAACATGCAA 18967 | | ||| |||| | ||| || ||||| |||||| | || |||| Sbjct 1034030 TCCTTTCAATAATATCCGGGTCAGGCTTGTTCCTTAGATGGGAAAACATTAGGCAAGCAA 1034089 Query 18968 AATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCA 19027 | || || | |||||| ||||||| ||||| || || ||||| || | ||||||| Sbjct 1034090 AGTCTGTGTGCAATCCCTCATCTCTACAGATCAACTCGTTTGAAAAGGTCAGGCCAGGCA 1034149 Query 19028 TCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTT 19087 | || ||| | ||||| | ||| || || | ||||| || || || || || ||||||| Sbjct 1034150 TGAGACCTTTCTTTTTGAGCCAAAAGATTGCGGCAAACGACCCCGAGAAAAAGATACCTT 1034209 Query 19088 CTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGAATCCATT 19147 ||||||| ||||| || || | || || | ||| ||||| | || |||||||| Sbjct 1034210 CTACTGCGGCAAATGCCACCAACCTCTCAGCGTAAAGAGCATTGTCATCTTGAATCCACC 1034269 Query 19148 TCAGTGCCCAATCAGCCTTCTTTTTTA-CACATGGCATTGTCTCTATAGAATTAAATAGA 19206 | | ||||| |||||||| | || | | | || ||| || || | |||||| | | Sbjct 1034270 TGATGGCCCACTCAGCCTTTTCCTTGATCTGAGGGATGTGT-TCAATGGCATTAAACA-A 1034327 Query 19207 TACAT-ACGCTCATCTGTATCTTTAACATATGCATCTATCAATAAACTGTACATTTCTGA 19265 | || || || | | ||| || | |||| || || | ||| ||| | || || Sbjct 1034328 GAAATCCCGTTCCTTAGGATCCTTGATGTATGTCTCGATAAGTAATGAGTAAGTCTCCGA 1034387 Query 19266 ATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCTGTAC 19325 ||| |||||||| || |||||||| ||||| |||||| | || |||| ||| || || Sbjct 1034388 ATGGATATTTTCCATCATGATCTGAAACCCGTAGAAACATTTGGCCTCTGGTATTTGAAC 1034447 Query 19326 TTCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAAAAA 19385 || |||| | || || || || ||||| || ||||| ||| || ||||| || Sbjct 1034448 CTCTGCGGAAAAATTCTCAACTAAGTTCTCATTGACAATTCCGTCAGATGCGGCAAAGAA 1034507 Query 19386 TGCTAATACATGTTTAATAAAATGTTTTTCATCTGAGGTTAATGTATT---CCAATCATT 19442 |||| || | || || | | ||| || || | |||| ||||||||| Sbjct 1034508 AGCTAGGACCCTTGACATGAAGAATCTCTCACCTTCCGTCATCCTATTTTCCCAATCATT 1034567 Query 19443 AATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTTTTATA 19502 |||||||| || | || | || || | ||||| ||||| |||||||| |||| || Sbjct 1034568 TATATCTTTCGACAGGTCAATCTCCTCTGCAGTCCAGAAAGATGCCTCTGCCCTTTTGTA 1034627 Query 19503 CATGTTCCATATATCACGATATTGTATAGGAAATATAACAAATCTATTTTTATTTTCTTT 19562 | ||| || ||| |||| || || || | ||||| ||| ||| || || | Sbjct 1034628 AGCCTGCCAAATCTCATGATACCTGATGGGGAAGAGCACAAACCTACGTTTGTTCTCAAT 1034687 Query 19563 AAGAATAGGTTC 19574 ||| | ||||| Sbjct 1034688 AAGCAATGGTTC 1034699 >seq6 Length=1007293 Score = 163 bits (180), Expect = 3e-35 Identities = 537/824 (65%), Gaps = 23/824 (3%) Strand=Plus/Plus Query 47877 AGTGCTATAGATGCTAGATTACATACAGCTACCTCATTTGGATTAGTATATTGTATTATT 47936 || || | |||||||| ||| || |||||| ||||||| | | | || | || |||| Sbjct 907843 AGAGCAACAGATGCTAAATTGCAAACAGCTGTCTCATTTTCAGAACTGTACTCTACTATT 907902 Query 47937 TCAGCACATAGATTACCACATTTGATAGTACCCAAATTTTGATGATT--ATTNNNNTTGT 47994 ||| ||| || || ||||||| || || ||||||| || || ||| || Sbjct 907903 TCACAACAGAGGTTGGAGGATTTGATCGTGCCTAAATTTTTTTGGTTCGATTTAGA--GT 907960 Query 47995 TACATGCGTCCTTGTAAAGCATAAAAGGTGTTCCAGTTTCTATCTGAGATT-CAATGATA 48053 | || | |||||||| ||||| ||||| ||| || |||| |||| || || | Sbjct 907961 TGCAAACATCCTTGTAGAGCATGAAAGGCCCTCCTGTCTCTACCTGACTTTGCAGT---- 908016 Query 48054 GATTTCCAAACAG---TCCTAGCCTTTATAACAGCTCTAGCTTTA-TTATCATGT----T 48105 ||||| | || | || | |||| | ||| || || || | || | Sbjct 908017 -ATTTCTGACCATAGTTTCTGGGCTTTGATTC-GCTTTACAGGTAATTCTGGAGTGGTTT 908074 Query 48106 CGTATTTAGTATATAACTTCTCAAATTCATCCCCATACACATTATCTAACCCAGGACATT 48165 | ||||| ||| || | |||||||| |||||||| |||| | |||||| || || Sbjct 908075 CATATTTTTCATACAATTCTTCAAATTCCTCCCCATAAACATCGTTTAACCCTGGCGCTT 908134 Query 48166 CATTAGGACACATCAATGACCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTG 48225 ||| |||| | || |||| || | | || || || |||| |||| |||| Sbjct 908135 CATCTGGACTGAATAAACACCATTCTCCGTTGGATTGCACCCTCTTCATGAATAAGTCTG 908194 Query 48226 GTATCCAAAGAGCTATAAATAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTT 48285 | ||||| | ||||| ||||||||| |||| || || || || || || || || Sbjct 908195 GAATCCATAAAGCTAGAAATAAATCTCTAGCCCTGAGCTCCTCTTTTCCGTGGTTTTTTC 908254 Query 48286 TAAGTTCAAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAATATATTGCCATTA-CA 48344 | |||| | |||||| | | ||| | |||||| || || || || || || || | Sbjct 908255 TGAGTTGCAAAAAGTCGAAGACATCTGAATGCCAGGGCTCCAAGTAAAT-GCAATAGGCT 908313 Query 48345 CCTGGTCGTTTATTACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAAC 48404 || |||| |||||||||||||||||| | ||||||||| || ||||| |||| | | | Sbjct 908314 CCCGGTCTTTTATTACCTCCTTGATCGACATATCTGGCCGTGTTGTTGAAAACACGAAGC 908373 Query 48405 ATTGGGACAATACCATTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTT 48464 || || || | ||||| || | || || | ||||| | || || || ||||| Sbjct 908374 ATAGGAACTAATCCATTGGAAACTCCGTTAGACCCCGATACGTAGGCACCGCTGCCTCTT 908433 Query 48465 ATATTACTAATTGAAATACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTA 48524 || || || |||||||| || || | || || |||| ||| | | Sbjct 908434 ATGTTGGAAACATGGATACCTATTCCCCCGGAGGCCTTTGAAATTAAAGCTGTCTCATGC 908493 Query 48525 AGGGTATCATAAATTCCTTCTATACTATCATCTATCATATTTAATAGAAAACAACTAGAC 48584 || || | | |||| || || || ||| ||| |||| ||| ||||| || ||| Sbjct 908494 AGCGTCTTAAAAATGCCATCAATGGAATCTTCTTTCATGCTTACGAGAAAGCATGATGAC 908553 Query 48585 ATTTGCGGA-TGACAAGTTCCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTT 48643 | | | || |||| ||| || | |||||| || || || |||||||| ||||| |||| Sbjct 908554 AGATACTGATTGAC-AGTACCGGCATTAAACAAGGTAGGCGATGCATGTATAAAAAATTT 908612 Query 48644 CTCTGATAACAATTTATATGTTTCAATAACAGAATCTATATCCC 48687 | || | | || || || | || || | ||||||||||| Sbjct 908613 TTGAGACATGAGTTCGTAGGTATTAAGTACGGCATCTATATCCC 908656 >seq11 Length=1516135 Score = 132 bits (146), Expect = 5e-26 Identities = 389/590 (66%), Gaps = 12/590 (2%) Strand=Plus/Plus Query 48104 TTCGTATTTAGTATATAACTTCTCAAATTCATCCCCATACACATTATCTAACCCAGGACA 48163 ||| ||||| ||| || | ||||||||| || ||||| |||| | |||||| || Sbjct 237024 TTCATATTTTTGATACAATTCCTCAAATTCCTCTCCATAAACATCGTTTAACCCTGGCGC 237083 Query 48164 TTCATTAGGACACATCAATGACCAATCCTCATCATTTTTTACTCTAGTCATAAATATATC 48223 ||||| |||| | || |||| || ||| || || | |||| |||| || Sbjct 237084 TTCATCTGGACTAAATAAACACCATTCTCCATTCGATTGCACCCGCTTCATGAATAAGTC 237143 Query 48224 TGGTATCCAAAGAGCTATAAATAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCT 48283 || ||||| | ||||| |||||||| || | || || || || || || || | Sbjct 237144 CGGAATCCACAAAGCTAAGAATAAATCTCTGGCCCTGAGCTCCTCTTTACCGTGGTTTTT 237203 Query 48284 TTTAAGTTCAAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAATATATTGCCATTA- 48342 | |||| | ||| || | | ||| | |||||| || || ||||| || || || Sbjct 237204 CCTGAGTTGCAAAAAATCGAAGACATCTGAATGCCAAGGCTCCAAATAAAT-GCAATAGG 237262 Query 48343 CACCTGGTCGTTTATTACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTA 48402 | || |||| |||||||||||||||||| | ||||||||| |||||||| |||| | | Sbjct 237263 CTCCCGGTCTTTTATTACCTCCTTGATCGACATATCTGGCCGTATTGTTGAAAACACGAA 237322 Query 48403 ACATTGGGACAATACCATTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTC 48462 ||| || || | ||||| || | || || | ||||| | || || || ||| Sbjct 237323 GCATAGGAACTAATCCATTGGAAACTCCGTTAGACCCCGATACGTAGGCGCCGCTGCCTC 237382 Query 48463 TTATATTACTAATTGAAATACCTATACCACC---TGCCATTTTAGATATTAGAGCACAC- 48518 |||| || || ||||| || || || |||| || || |||| ||| | Sbjct 237383 TTATGTTGGAAACATGGATACCAATTCCCCCGGATGCC---TTTGAGATTAAAGCTGTCT 237439 Query 48519 CGTTTAAGGGTATCATAAATTCCTTCTATACTATCATCTATCATATTTAATAGAAAACAA 48578 ||| || || | | |||| || || || ||| ||| |||| ||| || || ||| Sbjct 237440 CGTGCAA-CGTCTTAAAAATGCCATCAATGGAATCTTCTTTCATGCTTACGAGGAAGCAA 237498 Query 48579 CTAGACATTTGC-GGATGACAAGTTCCTGAATTAAATAATGTTGGAGATGCATGAATAAA 48637 |||| | | || |||| ||| || | |||||| || || || |||||||| ||||| Sbjct 237499 GATGACAGGTACTGGTTGAC-AGTACCGGCATTAAACAAGGTAGGCGATGCATGTATAAA 237557 Query 48638 CCATTTCTCTGATAACAATTTATATGTTTCAATAACAGAATCTATATCCC 48687 |||| | || | | || || || | || || | ||| ||||||| Sbjct 237558 AAATTTTTGAGACATGAGTTCGTAGGTATTAAGCACGGCATCGATATCCC 237607 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562108673525520