Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20parabailii_20[genbank_20GCA_5F001984395.2_202017 -03-16] 18 sequences; 20,864,403 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq1 158 1e-33 seq12 140 4e-28 >seq1 Length=2110500 Score = 158 bits (174), Expect = 1e-33 Identities = 573/880 (65%), Gaps = 25/880 (3%) Strand=Plus/Plus Query 36872 CATAACTCCCATTTTTTGATATTCTCCAACTCGTCTT-TCGAAAAAATTTGTCTTTCCTT 36930 |||||| || ||||| || || ||| | |||| || || || || || |||||| Sbjct 1033779 CATAACACCAGCCTTTTGGTAATCCGAAACCC-TCTTCTCAAAGAAGTTAGTTTTTCCTG 1033837 Query 36931 CTAGTGATATATTTTCCATAAAATCAAATGGATTAGATGTATTATATATAGTACTACATG 36990 | || || ||||| |||||||||||||| ||||||| || || | |||| | | || Sbjct 1033838 CCAGCGAAATATTCTCCATAAAATCAAACGGATTAG---TAACATTGA-AGTATTTCTTG 1033893 Query 36991 AT----AATTCCTTCAGAAGCCTATCCGCAACAAATTCTATGTATTTACACATTAGTTCA 37046 | | | ||| ||||| || || ||||| || | ||| | | ||| || | Sbjct 1033894 TTCCCCAGAGCGACCAGCAGCCTGTCTGCTACAAACTCAACGTACTGATTCATCAGCGCG 1033953 Query 37047 TAGTTTATACCAATTAGTTTTACTGGAATTGCATCTTGAAGAAATAGTTTTTCT--ATTA 37104 || || || | || || || | ||| || | |||||| |||||| || Sbjct 1033954 GCATTCATGCCCAGCAGAGCCACGGGGAGTGCGTCA--ATGAAATATCTTTTCTCGATCT 1034011 Query 37105 TTACAGCATCTTTAACTATATTAACAATAACTTCTTCAGTTGGGGGATATT--TTAAATA 37162 ||||| ||| ||| || | |||||| || | | | || | || ||| || Sbjct 1034012 CGACAGCTTCTGTAATAATCCTTTCAATAATATC--CGGGTCAGGCTTGTTCCTTAGATG 1034069 Query 37163 TTTAAACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATT 37222 ||||| || || ||||| || || || || |||||||||| ||||| || || Sbjct 1034070 GGAAAACATTAGGCAAGCAAAGTCTGTGTGCAATCCCTCATCTCTACAGATCAACTCGTT 1034129 Query 37223 AGAAAAGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGA 37282 |||||||| | || ||||| | |||| | ||||| | |||||| ||||| ||||| || Sbjct 1034130 TGAAAAGGTCAGGCCAGGCATGAGACCTTTCTTTTTGAGCCAAAAGATTGCGGCAAACGA 1034189 Query 37283 TCCAGAAAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGT-ACCGAAAGTTG 37341 || || || || |||||||| ||||| |||||||| || | || | | | || || | Sbjct 1034190 CCCCGAGAAAAAGATACCTTCTACTGCGGCAAATGCCACCA-ACCTCTCAGCGTAAAGAG 1034248 Query 37342 AACTATAATCAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAA-CACATTCAATT 37400 | | | ||| |||||| | | | ||| || |||||| || | | | | | Sbjct 1034249 CATTGTCATCTTGAATCCACCTGATGGCCCACTCAGCCTTTTCCTTGATCTGAGGGATGT 1034308 Query 37401 GTTTCAATTGCTTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATT 37460 ||| |||| || || || | || | ||| | | ||| | || || || || || Sbjct 1034309 GTT-CAATGGCATTAAACAAGAAATCCCGTTCCTTAGGATCCTTGATGTATGTCTCGATA 1034367 Query 37461 AGTAAACTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACAC 37520 ||||| || | || || || |||||||| || |||||||| || || ||||| Sbjct 1034368 AGTAATGAGTAAGTCTCCGAATGGATATTTTCCATCATGATCTGAAACCCGTAGAAACAT 1034427 Query 37521 CTAGCTTCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATC 37580 | || || | || |||||| || |||| ||| | ||||||| ||||| || || Sbjct 1034428 TTGGCCTCTGGTATTTGAACCTCTGCGGAAAAATTCTCAACTAAGTTCTCATTGACAATT 1034487 Query 37581 CCATCACTAGCTGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCAT--TTG 37638 || ||| || ||||||||||| || || | || || ||| ||| | | | Sbjct 1034488 CCGTCAGATGCGGCAAAGAAAGCTAGGACCCTTGACATGAAGAATCTCTCACCTTCCGTC 1034547 Query 37639 ATAAT-TTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACGGTCCAAAAA 37697 || | |||| ||||||||| |||||||| || | |||| || || | ||||| ||| Sbjct 1034548 ATCCTATTTTCCCAATCATTTATATCTTTCGACAGGTCAATCTCCTCTGCAGTCCAGAAA 1034607 Query 37698 CTTGCCAATGCACGTTTATACATCGTCCAAATATCATTAT 37737 |||| ||| | ||| || | |||||| |||| || Sbjct 1034608 GATGCCTCTGCCCTTTTGTAAGCCTGCCAAATCTCATGAT 1034647 >seq12 Length=1443312 Score = 140 bits (154), Expect = 4e-28 Identities = 542/841 (64%), Gaps = 17/841 (2%) Strand=Plus/Plus Query 36907 TTTCGAAAAAATTTGTCTTTCCTTCTAGTGATATATTTTCCATAAAATCAAATGGATTAG 36966 |||| || || || || |||||| | || || |||||||||||||| ||||| ||||||| Sbjct 767409 TTTCAAAGAAGTTAGTTTTTCCTGCCAGCGAAATATTTTCCATAAAGTCAAACGGATTAG 767468 Query 36967 ATGTATTATATATAGTACTACATGAT----AATTCCTTCAGAAGCCTATCCGCAACAAAT 37022 || || | |||| | | || | | | ||| ||||| || || ||||| Sbjct 767469 ---TAACATTGA-AGTATTTCTTGTTCCCAAGAGCGACCAGCAGCCTGTCTGCTACAAAC 767524 Query 37023 TCTATGTATTTACACATTAGTTCATAGTTTATACCAATTAGTTTTACTGGAATTGCATCT 37082 || | ||| | | ||| || | || || || | || || || | || || Sbjct 767525 TCAACGTACTGATTCATCAGCGCGGCATTCATGCCCAGCAGAGCCACGGGGAGCGCGTC- 767583 Query 37083 TGAAGAAATAGTTTTTCT--ATTATTACAGCATCTTTAACTATATTAACAATAACTTCTT 37140 || |||||| |||||| || ||||| ||| ||| || | |||||| || Sbjct 767584 -GATGAAATACCTTTTCTCGATCTCGACAGCTTCTGTAATGATCCTTTCAATAATATCAG 767642 Query 37141 CAGTTGGGGGATATTTTAAATATTTAAACAATAAACATGCAAAATCACAATGTAAACCTT 37200 | || | | ||| || ||||| || ||| ||||| || || || |||| Sbjct 767643 GATCAGGCTTGTTTCTTAGATGGGAAAACATTAGACAAGCAAAGTCTGTGTGCAATCCTT 767702 Query 37201 CATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACCTCtttttttAA 37260 ||||||||| || || || || |||||||| | |||||||| | || | ||||| | Sbjct 767703 CATCTCTACAGATTAACTCGTTTGAAAAGGTCAGGCCTGGCATGAGGCCCTTCTTTTTGA 767762 Query 37261 TCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGCTGCAAATGCTA 37320 |||||| || || ||||||||||| || || || |||||||| ||||| |||||||| | Sbjct 767763 GCCAAAAGATGGCGGCAAAAGATCCCGAGAAAAAGATACCTTCTACTGCGGCAAATGCCA 767822 Query 37321 CAAGACGTGTACCGAAAGTTGAACTATAATCAGAAATCCAtttttttGTCCAATCTGCC- 37379 | || | | || || | | | | ||| |||||| | | | ||| || ||| Sbjct 767823 CCAGCCTCTCAGCGTAAAGAGCATTGTCATCTTGAATCCACCTGATAGCCCACTCAGCCT 767882 Query 37380 TTTAATTTAACACATTCAATTGTTTCAATTGCTTTTAAGAGAAAGtttttttCTTCACTA 37439 ||| || | | | | || ||||| || || || | || | ||| | | | Sbjct 767883 TTTCCTTGATCTGAGGGATGTG-CTCAATCGCATTAAACAAGAAATCCCGTTCCTTAGGA 767941 Query 37440 TCTGTTATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAATATTTTCAATAGCT 37499 || | || || || || |||| ||| || | || || || |||||||| || Sbjct 767942 TCCTTGATGTATGTCTCGATTAATAATGAGTAAGTCTCCGAATGGATATTTTCCATCATG 768001 Query 37500 ATCTGAAAACCATAAAAACACCTAGCTTCAGATAATTGAACATCGTTAAAAAACCTCTTA 37559 ||||| || || || ||||| | || || | || ||||| || |||| ||| | Sbjct 768002 ATCTGGAACCCGTAGAAACATTTGGCCTCTGGTATCTGAACCTCTGCGGAAAAATTCTCA 768061 Query 37560 GCTAAGTTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAGCAAGAAC-ATA-TTTTA 37617 |||| || ||||| || || || ||| || ||||||||||| || || || || Sbjct 768062 ACTAAATTCTCATTGACAATTCCGTCAGATGCCGCAAAGAAAGCTAGGACTCTAGACATA 768121 Query 37618 TAAAATGTCTTTCATCATTTGATAAT-TTTTTCCAATCATTAATATCTTTTGATAAATCA 37676 | ||| ||| | | | | || | |||| ||||||||| |||||||| || | ||| Sbjct 768122 AAGAATCTCTCGCCTTCTGTCATCCTATTTTCCCAATCATTTATATCTTTCGACAGGTCA 768181 Query 37677 ACTTCATCAACGGTCCAAAAACTTGCCAATGCACGTTTATACATCGTCCAAATATCATTA 37736 | || || | ||||| ||| |||| || | ||| || | |||||| |||| | Sbjct 768182 ATCTCCTCTGCAGTCCAGAAAGATGCCTCCGCCCTTTTGTAGGCCTGCCAAATCTCATGA 768241 Query 37737 T 37737 | Sbjct 768242 T 768242 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592316666728720