Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20parabailii_20[genbank_20GCA_5F001984395.2_202017 -03-16] 18 sequences; 20,864,403 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq9 113 3e-20 seq14 107 1e-18 seq10 95.1 9e-15 seq6 86.0 5e-12 >seq9 Length=2005801 Score = 113 bits (124), Expect = 3e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || || ||||| | ||| |||| ||| | || |||||||||||| || || |||||| Sbjct 503079 CCACCTCTTAGTCTCAAAACCAGATGCAAAGTTGACTCTTTTTGAATGTTATAGTCAGAT 503138 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 ||| ||| | || |||| ||||||||| ||||| |||| || ||||| || | || Sbjct 503139 AGAGTTCTTCCATCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTGTTGGTCAGGTGGG 503198 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | || || || || ||||| ||||| | | || || || | ||||||| Sbjct 503199 ATACCTTCTTTATCTTGGATCTTCGACTTTACGTTGTCGATAGTGTCAGAAGACTCCACC 503258 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || | ||||| || || || ||||| ||||| |||||||||||||| Sbjct 503259 TCTAATGTAATAGTCTTACCGGTCAATGTTTTAACAAAAATCTGCAT 503305 Score = 109 bits (120), Expect = 4e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 48557 CACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTC 48616 ||| | |||||| || |||||||||||| ||||| ||||| ||| ||| | || || Sbjct 502184 CACAAGATGTAGGGTCGACTCTTTTTGAATGTTGTAGTCAGAAAGAGTTCTTCCATCCTC 502243 Query 48617 CAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCT 48676 || |||||||| ||||| |||| || |||||| || | |||| |||||||||||| Sbjct 502244 CAGTTGCTTACCTGCAAAGATCAATCTCTGTTGGTCGGGCGGAATGCCCTCCTTGTCCTG 502303 Query 48677 AATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTT 48736 |||||| ||| ||| | | | || || | || || || | ||||| || || Sbjct 502304 AATCTTGGATTTGACATTGTCAATGGTATCAGAGGATTCAACTTCGAGTGTAATAGTCTT 502363 Query 48737 TCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || | ||| || ||||| |||||||| Sbjct 502364 ACCGGTAAGAGTCTTAACAAATATCTGCAT 502393 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || || ||||| | ||| |||| ||| | || |||||||||||| || || |||||| Sbjct 502623 CCACCTCTTAGTCTCAAAACCAGATGCAAAGTTGACTCTTTTTGAATGTTATAGTCAGAT 502682 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 ||| ||| | || |||| ||||||||| ||||| |||| || ||||| || | || Sbjct 502683 AGAGTTCTTCCATCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTGTTGGTCAGGTGGG 502742 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | || || || || ||||| ||||| | | || || || | || ||| Sbjct 502743 ATACCTTCTTTATCCTGGATCTTCGACTTTACGTTGTCGATAGTGTCAGAGGATTCAACC 502802 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || | ||||| || || || || | ||| || ||||| |||||||| Sbjct 502803 TCAAGTGTAATAGTCTTACCAGTAAGAGTCTTAACAAATATCTGCAT 502849 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || || ||||| | ||| |||| ||| | || |||||||||||| || || |||||| Sbjct 502851 CCACCTCTTAGTCTCAAAACCAGATGCAAAGTTGACTCTTTTTGAATGTTATAGTCAGAT 502910 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 ||| ||| | || |||| ||||||||| ||||| |||| || ||||| || | || Sbjct 502911 AGAGTTCTTCCATCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTGTTGGTCAGGTGGG 502970 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | || || || || ||||| ||||| | | || || || | || ||| Sbjct 502971 ATACCTTCTTTATCCTGGATCTTCGACTTTACGTTGTCGATAGTGTCAGAGGATTCAACC 503030 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || | ||||| || || || || | ||| || ||||| |||||||| Sbjct 503031 TCAAGTGTAATAGTCTTACCAGTAAGAGTCTTAACAAATATCTGCAT 503077 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || || |||| | ||| || | ||||| || || ||||| ||||||||||||||| Sbjct 503307 CCACCTCTTAATCTCAAAACGAGGTGTAGAGTTGATTCCTTTTGGATATTGTAATCAGAT 503366 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 | | ||| | || |||||||||||||| || || |||| || || ||||| | || Sbjct 503367 AAAGTTCTGCCATCCTCCAACTGCTTACCTGCGAAGATCAATCTTTGCTGATCAGGTGGG 503426 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | ||| || || || ||||| ||||| | | || || || | || ||| Sbjct 503427 ATGCCTTCTTTATCCTGGATCTTCGACTTTACGTTGTCGATAGTGTCAGAGGATTCGACC 503486 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || | ||||| || || || || | ||| || |||||||||||||| Sbjct 503487 TCAAGTGTAATAGTCTTACCAGTAAGAGTCTTAACAAAAATCTGCAT 503533 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || || ||||| | ||| ||||| || | || |||||||||||| || || ||||| Sbjct 502395 CCACCTCTTAGTCTCAAAACCAAGTGCAAAGTTGACTCTTTTTGAATGTTATAGTCAGAC 502454 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 ||| ||| | || |||| ||||||||| ||||| |||| || ||||| || | || Sbjct 502455 AGAGTTCTTCCATCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTGTTGGTCAGGTGGG 502514 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | || || || || ||||| ||||| | | || || || | || ||| Sbjct 502515 ATACCTTCTTTATCCTGGATCTTCGACTTTACGTTGTCGATAGTGTCAGAGGATTCAACC 502574 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || | ||||| || || || || | ||| || ||||| |||||||| Sbjct 502575 TCAAGTGTAATAGTCTTACCAGTAAGAGTCTTAACAAATATCTGCAT 502621 >seq14 Length=1283838 Score = 107 bits (118), Expect = 1e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || || |||| | ||| |||| || || || ||||||||||| ||||| ||||| Sbjct 778968 CCACCTCTTAATCTCAAAACCAGGTGCAGGGTAGATTCTTTTTGAATGTTGTAGTCAGAA 778909 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 ||| ||| | || |||| ||||||||| || || ||||||| |||||| || | ||| Sbjct 778908 AGAGTTCTTCCATCCTCCAGCTGCTTACCTGCGAAGATCAGTCTCTGTTGGTCAGGTGGA 778849 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | || || || || ||||| |||||| | | || || || | ||| ||| Sbjct 778848 ATACCTTCTTTATCCTGGATCTTCGACTTTACATTGTCGATAGTGTCAGAAGACTCTACC 778789 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 |||| |||||| || || || || | || || |||||||||||||| Sbjct 778788 TCCAGCGTAATAGTCTTACCAGTAAGGGTCTTGACAAAAATCTGCAT 778742 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || || |||| | ||| |||| || || || ||||||||||| || || ||||| Sbjct 779196 CCACCTCTTAATCTCAAAACCAGGTGCAGGGTAGATTCTTTTTGAATGTTATAGTCAGAA 779137 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 ||| ||| | || |||| ||||||||| ||||| |||| || |||||| || | ||| Sbjct 779136 AGAGTTCTTCCATCCTCCAGCTGCTTACCAGCAAAGATCAATCTCTGTTGGTCGGGCGGA 779077 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | |||||||||||| |||||| || || | | | || || | || ||| Sbjct 779076 ATGCCCTCCTTGTCCTGAATCTTCGACTTCACGTTGTCGATTGTGTCAGAGGATTCAACC 779017 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || | || || || || || || | ||| || |||||||||||||| Sbjct 779016 TCAAGTGTTATAGTCTTACCAGTAAGAGTCTTAACAAAAATCTGCAT 778970 Score = 98.7 bits (108), Expect = 8e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 48575 CTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAA 48634 ||| |||||||| ||||| ||||| ||| ||| | || |||| ||||||||| || || Sbjct 779389 CTCCTTTTGAATGTTGTAGTCAGAAAGAGTTCTTCCATCCTCCAGCTGCTTACCTGCGAA 779330 Query 48635 TATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGA 48694 ||||||| |||||| || | || | || || || || ||||| |||||| Sbjct 779329 GATCAGTCTCTGTTGGTCAGGTGGGATACCTTCTTTATCCTGGATCTTCGACTTTACATT 779270 Query 48695 ACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTAC 48754 | | || || || | ||| ||||||| |||||| || || || || | || || || Sbjct 779269 GTCGATAGTGTCAGAAGACTCTACCTCCAGCGTAATAGTCTTACCAGTAAGGGTCTTGAC 779210 Query 48755 AAAAATCTGCAT 48766 |||||||||||| Sbjct 779209 AAAAATCTGCAT 779198 >seq10 Length=1751495 Score = 95.1 bits (104), Expect = 9e-15 Identities = 138/195 (71%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 48576 TCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAAT 48635 || || ||||| || || ||||| | ||| | || ||||| |||||||| ||||| Sbjct 575226 TCCTTCTGAATGTTATAGTCAGACAAGGTTCTGCCATCCTCCAATTGCTTACCAGCAAAG 575285 Query 48636 ATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAA 48695 |||| || ||| ||||| | |||| || |||||||| ||||||| || ||| Sbjct 575286 ATCAATCTCTGCTGATCAGGTGGAATACCTTCCTTGTCTTGAATCTTTGACTTGACATTG 575345 Query 48696 CCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACA 48755 | | || || || | ||| || || | ||||| || || |||||||| || || || Sbjct 575346 TCGATAGTGTCAGAAGACTCGACTTCAAGGGTAATAGTCTTACCCGTCAAGGTCTTGACG 575405 Query 48756 AAAATCTGCATCGTG 48770 |||||||||||| || Sbjct 575406 AAAATCTGCATCTTG 575420 >seq6 Length=1007293 Score = 86.0 bits (94), Expect = 5e-12 Identities = 142/205 (69%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 48554 CAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTC 48613 ||| ||||| || | ||| || ||||| || ||||| ||||| | | ||| | || Sbjct 101399 CAAGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCCATC 101340 Query 48614 GTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673 |||||||||||||| || || |||| || ||| || || | |||| ||||||||||| Sbjct 101339 CTCCAACTGCTTACCAGCGAAAATCAATCTCTGCTGGTCAGGTGGAATACCCTCCTTGTC 101280 Query 48674 GCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGT 48733 |||||| || ||| | | || || || | || ||||||| || || || Sbjct 101279 TTGAATCTTAGACTTGACATTGTCAATAGTGTCGGAGGATTCGACCTCCAAAGTGATGGT 101220 Query 48734 TTTTCCCGTCAAAGTTTTTACAAAA 48758 || || |||||||| || || ||| Sbjct 101219 CTTACCAGTCAAAGTCTTGACGAAA 101195 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380937516431814