Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20parabailii_20[genbank_20GCA_5F001984395.2_202017 -03-16] 18 sequences; 20,864,403 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq10 104 2e-17 seq14 98.7 8e-16 seq9 91.5 1e-13 >seq10 Length=1751495 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 28551 AAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCT 28610 || ||||| || || || || || || |||||||| || |||||| ||| || || Sbjct 575419 AAGATGCAGATTTTCGTCAAGACCTTGACGGGTAAGACTATTACCCTTGAAGTCGAGTCT 575360 Query 28611 TCAGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGAT 28670 || || || | | | || ||||| ||| || ||||| || || | || ||| Sbjct 575359 TCTGACACTATCGACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATTCCACCTGAT 575300 Query 28671 CAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTAT 28730 || |||||| | |||||||| || || |||||||| ||| | ||| || | || ||| Sbjct 575299 CAGCAGAGATTGATCTTTGCTGGTAAGCAATTGGAGGATGGCAGAACCTTGTCTGACTAT 575240 Query 28731 AACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGG 28780 |||||||| || |||||||| ||||| |||| | ||||| |||| || Sbjct 575239 AACATTCAGAAGGAATCTACCTTGCACTTGGTGCTTAGATTGAGAGGTGG 575190 >seq14 Length=1283838 Score = 98.7 bits (108), Expect = 8e-16 Identities = 104/137 (76%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 28647 GACAAAGAGGGAGTGCCCGTAGATCAACAGAGACTTATCTTTGCGGGCAAACAATTGGAA 28706 ||||| ||||| | || || ||||||||| | |||||||| || || || |||| Sbjct 779063 GACAAGGAGGGCATTCCGCCCGACCAACAGAGATTGATCTTTGCTGGTAAGCAGCTGGAG 779122 Query 28707 GATTCTAAAACTATGGCCGATTATAACATTCAAAAAGAATCTACTCTGCACATGGTATTA 28766 ||| | |||| | | || ||||||||||||||||||||||| |||||| |||| || Sbjct 779123 GATGGAAGAACTCTTTCTGACTATAACATTCAAAAAGAATCTACCCTGCACCTGGTTTTG 779182 Query 28767 AGATTACGAGGAGGGAT 28783 |||||| |||| || || Sbjct 779183 AGATTAAGAGGTGGTAT 779199 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 ||||| || ||||| || || | || ||||| || ||||| || || |||| Sbjct 778742 ATGCAGATTTTTGTCAAGACCCTTACTGGTAAGACTATTACGCTGGAGGTAGAGTCTTCT 778801 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | | || | ||| || ||| || ||||| || | || || ||| Sbjct 778802 GACACTATCGACAATGTAAAGTCGAAGATCCAGGATAAAGAAGGTATTCCACCTGACCAA 778861 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 |||||||| ||||| || || || || |||| ||| | |||| | | || || ||| Sbjct 778862 CAGAGACTGATCTTCGCAGGTAAGCAGCTGGAGGATGGAAGAACTCTTTCTGACTACAAC 778921 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 ||||||||||||||||| |||||| |||| || |||||| |||| || || Sbjct 778922 ATTCAAAAAGAATCTACCCTGCACCTGGTTTTGAGATTAAGAGGTGGTAT 778971 >seq9 Length=2005801 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 ||||| || ||||| |||||||| || ||||| || ||||| || ||| |||| Sbjct 503305 ATGCAGATTTTTGTTAAAACATTGACCGGTAAGACTATTACATTAGAGGTGGAGTCTTCT 503246 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | | | | ||| || ||| || ||||| || | || || ||| Sbjct 503245 GACACTATCGACAACGTAAAGTCGAAGATCCAAGATAAAGAAGGTATCCCACCTGACCAA 503186 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 || ||| | |||||||| || || || |||| ||| | |||| | | || |||||| Sbjct 503185 CAAAGATTGATCTTTGCAGGTAAGCAGCTGGAGGATGGAAGAACTCTATCTGACTATAAC 503126 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 ||||||||||| || ||| |||| |||| || ||| || |||| || || Sbjct 503125 ATTCAAAAAGAGTCAACTTTGCATCTGGTTTTGAGACTAAGAGGTGGTAT 503076 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 ||||| |||||||| || || | || ||||| || ||||| |||| ||| | || Sbjct 502393 ATGCAGATATTTGTTAAGACTCTTACCGGTAAGACTATTACACTCGAAGTTGAATCCTCT 502334 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | | || |||| || || ||||| ||||| | || || ||| Sbjct 502333 GATACCATTGACAATGTCAAATCCAAGATTCAGGACAAGGAGGGCATTCCGCCCGACCAA 502274 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 |||||| | |||||||| || || ||| |||| ||| | |||| | | || || ||| Sbjct 502273 CAGAGATTGATCTTTGCAGGTAAGCAACTGGAGGATGGAAGAACTCTTTCTGACTACAAC 502214 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGG 28780 ||||||||||| || || || || | || |||||||| |||| || Sbjct 502213 ATTCAAAAAGAGTCGACCCTACATCTTGTGCTAAGATTAAGAGGTGG 502167 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 ||||| |||||||| || || | || ||||| || ||||| || ||| | || Sbjct 502621 ATGCAGATATTTGTTAAGACTCTTACTGGTAAGACTATTACACTTGAGGTTGAATCCTCT 502562 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | | | | ||| || ||| || ||||| || | || || ||| Sbjct 502561 GACACTATCGACAACGTAAAGTCGAAGATCCAGGATAAAGAAGGTATCCCACCTGACCAA 502502 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 || ||| | |||||||| || || || |||| ||| | |||| || | || |||||| Sbjct 502501 CAAAGATTGATCTTTGCAGGTAAGCAGCTGGAGGATGGAAGAACTCTGTCTGACTATAAC 502442 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 ||||||||||| || ||| ||||| |||| || ||| || |||| || || Sbjct 502441 ATTCAAAAAGAGTCAACTTTGCACTTGGTTTTGAGACTAAGAGGTGGTAT 502392 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425404706676822