Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20parabailii_20[genbank_20GCA_5F001984395.2_202017 -03-16] 18 sequences; 20,864,403 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq14 134 7e-27 seq6 125 4e-24 seq11 122 4e-23 seq9 109 3e-19 >seq14 Length=1283838 Score = 134 bits (148), Expect = 7e-27 Identities = 291/434 (67%), Gaps = 1/434 (0%) Strand=Plus/Minus Query 25933 CATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTT 25992 ||||||||| || | |||||| | ||| ||| |||||||| || | || || || || Sbjct 991071 CATAAATAAGTCGGAAATCCATAATGCTGGAAACAAATCTCTGGCGCGAATCTCCTCCTT 991012 Query 25993 TCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATA 26052 ||||||||||| | | || | ||| || |||||||||| |||||| || || ||||| Sbjct 991011 ACCGTGATTCTTCCTAATGTCGATGAAGTCGAAAATATCTGCGTGCCAAGGCTCCAAATA 990952 Query 26053 GATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATT 26112 | |||||| ||| |||||| |||||||| || || || || || || | ||| Sbjct 990951 TAGGGCAAAAGCGCCTGGTCTTTTATTACCACCTTGGTCCACATACCTAGCGGTATTATT 990892 Query 26113 GAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGA 26172 || || | ||| || | ||| ||| | || || || || | | ||| | || Sbjct 990891 AAAGACACGAATCATAGGGATTAACCCATTAGATGTACCATTGGTACCAGCAATATACGA 990832 Query 26173 TCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGC 26232 || || || | |||| ||| ||| | ||| || |||||||| || ||||| Sbjct 990831 ACCAGTGGAGCGGATATTGTGGATATGCAAACCAATACCACCAGCAGTCTTGGAAATCAT 990772 Query 26233 TGCACAATCTGAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAA 26292 ||||| ||| | || || | || || | || |||| ||||||| ||| | Sbjct 990771 AGCACATTCTTTGAGAGTGTCATAGATACCCTCGATAGAATCATCTTTCATGGCTACCAG 990712 Query 26293 AAAACAAGAAGATAATTGCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGCATG 26352 |||||||||| | || | ||| | ||||||| ||| |||| || || | |||||| Sbjct 990711 GAAACAAGAAGCCATCTGAGGATGTGGAGTTCCTGCATTGAATAGCGTAGGGGAAGCATG 990652 Query 26353 AGTATAATATCCTT 26366 | | |||| |||| Sbjct 990651 AATGAAATA-CCTT 990639 >seq6 Length=1007293 Score = 125 bits (138), Expect = 4e-24 Identities = 194/272 (71%), Gaps = 10/272 (4%) Strand=Plus/Plus Query 25888 ATTTGGACAGAATAAATGCCAATCAGCATT---TTGCTCAACTTTCTCCATAAATAAATC 25944 || ||||| ||||||| ||| || | || |||| || ||| ||| ||||| || Sbjct 908136 ATCTGGACTGAATAAACACCATTCTCCGTTGGATTGC---ACCCTCTTCATGAATAAGTC 908192 Query 25945 TGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTT 26004 ||||||||| | || |||||||||||| || || | || ||||||||||| || || Sbjct 908193 TGGAATCCATAAAGCTAGAAATAAATCTCTAGCCCTGAGCTCCTCTTTTCCGTGGTTTTT 908252 Query 26005 TTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAA-- 26062 | | || | || || || || | |||||| ||||| || || || || || |||| | Sbjct 908253 TCTGAGTTGCAAAAAGTCGAAGACATCTGAATGCCAGGGCTCCAAGTAAAT-GCAATAGG 908311 Query 26063 CTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTC 26122 || || |||||| || |||||||| || ||||| || || | |||||||| Sbjct 908312 CT-CCCGGTCTTTTATTACCTCCTTGATCGACATATCTGGCCGTGTTGTTGAAAACACGA 908370 Query 26123 AACATTGGAACTAATCCAGTTGAAAATCCGTT 26154 | ||| |||||||||||| | |||| |||||| Sbjct 908371 AGCATAGGAACTAATCCATTGGAAACTCCGTT 908402 >seq11 Length=1516135 Score = 122 bits (134), Expect = 4e-23 Identities = 193/272 (71%), Gaps = 10/272 (4%) Strand=Plus/Plus Query 25888 ATTTGGACAGAATAAATGCCAATCAGCATT---TTGCTCAACTTTCTCCATAAATAAATC 25944 || ||||| |||||| ||| || |||| |||| || || ||| ||||| || Sbjct 237087 ATCTGGACTAAATAAACACCATTCTCCATTCGATTGC---ACCCGCTTCATGAATAAGTC 237143 Query 25945 TGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTT 26004 |||||||||| || | ||||||||||| || || | || ||||| ||||| || || Sbjct 237144 CGGAATCCACAAAGCTAAGAATAAATCTCTGGCCCTGAGCTCCTCTTTACCGTGGTTTTT 237203 Query 26005 TTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAA-- 26062 | || | || ||||| || | |||||| ||||| || || ||||| || |||| | Sbjct 237204 CCTGAGTTGCAAAAAATCGAAGACATCTGAATGCCAAGGCTCCAAATAAAT-GCAATAGG 237262 Query 26063 CTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTC 26122 || || |||||| || |||||||| || ||||| || || | |||||||| Sbjct 237263 CT-CCCGGTCTTTTATTACCTCCTTGATCGACATATCTGGCCGTATTGTTGAAAACACGA 237321 Query 26123 AACATTGGAACTAATCCAGTTGAAAATCCGTT 26154 | ||| |||||||||||| | |||| |||||| Sbjct 237322 AGCATAGGAACTAATCCATTGGAAACTCCGTT 237353 >seq9 Length=2005801 Score = 109 bits (120), Expect = 3e-19 Identities = 278/423 (66%), Gaps = 0/423 (0%) Strand=Plus/Plus Query 25930 CTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTC 25989 || ||||||||| || | |||||| | || ||| |||||||| || | || || || Sbjct 289902 CTTCATAAATAAGTCGGAAATCCATAACGCTGGAAACAAATCTCTGGCGCGAATCTCCTC 289961 Query 25990 TTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAA 26049 || |||||||| || | | || | |||||||||||||| | |||||| || || || Sbjct 289962 CTTACCGTGATTTTTCCTAATGTCGATAAAATCAAAAATATCAGCGTGCCAGGGCTCCAA 290021 Query 26050 ATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTC 26109 ||| | |||||| || |||||| |||||||| || || || | ||||| | Sbjct 290022 ATATAGGGCAAAAGCGCCAGGTCTTTTATTACCACCTTGGTCCACATACCGAGCAGTATT 290081 Query 26110 ATTGAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTT 26169 ||| ||||| | ||| || | || |||| | || ||||| || | | ||| | Sbjct 290082 ATTAAAAACACGAATCATGGGGATTAGTCCATTAGATGTACCGTTGGTACCAGCAATATA 290141 Query 26170 GGATCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAAT 26229 || || || || | |||| ||| ||| | ||| || |||||||| || || || Sbjct 290142 CGAACCAGTTGAACGGATATTGTGGATATGCAAACCAATACCACCAGCAGTCTTGGAGAT 290201 Query 26230 AGCTGCACAATCTGAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAA 26289 ||||| ||| | || || | || || | || ||| ||||||| ||| Sbjct 290202 CATAGCACATTCTTTTAGAGTGTCATAGATACCCTCGATAGAGTCATCTTTCATGGCTAC 290261 Query 26290 TAAAAAACAAGAAGATAATTGCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGC 26349 | || ||||||| | || | ||| | ||||||| ||| |||| || || | ||| Sbjct 290262 CAGGAAGCAAGAAGCCATCTGAGGATGTGGGGTTCCTGCATTGAATAGCGTAGGGGAAGC 290321 Query 26350 ATG 26352 || Sbjct 290322 GTG 290324 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253039944489350