Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20parabailii_20[genbank_20GCA_5F001984395.2_202017 -03-16] 18 sequences; 20,864,403 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq9 159 5e-34 seq14 127 3e-24 >seq9 Length=2005801 Score = 159 bits (176), Expect = 5e-34 Identities = 172/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| ||||||||||||| || || |||||||||||||| || || |||| Sbjct 503305 ATGCAGATTTTTGTTAAAACATTGACCGGTAAGACTATTACATTAGAGGTGGAGTCTTCT 503246 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | ||| ||||| || || || |||||||||||||| || || || || ||| Sbjct 503245 GACACTATCGACAACGTAAAGTCGAAGATCCAAGATAAAGAAGGTATCCCACCTGACCAA 503186 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 ||||||||||| | ||| ||||||||||| || ||| |||||| |||| || ||||| Sbjct 503185 CAAAGATTGATCTTTGCAGGTAAGCAGCTGGAGGATGGAAGAACTCTATCTGACTATAAC 503126 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 || |||||| | || | ||| | || || ||| ||||||| ||| Sbjct 503125 ATTCAAAAAGAGTCAACTTTGCATCTGGTTTTGAGACTAAGAGGTGGT 503078 Score = 140 bits (154), Expect = 5e-28 Identities = 170/230 (74%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| |||| || | ||||| || ||||||||| | || |||||| ||| Sbjct 503533 ATGCAGATTTTTGTTAAGACTCTTACTGGTAAGACTATTACACTTGAGGTCGAATCCTCT 503474 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | ||| ||||| || || || || |||||||||||||| || || || || Sbjct 503473 GACACTATCGACAACGTAAAGTCGAAGATCCAGGATAAAGAAGGCATCCCACCTGATCAG 503414 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 ||||||||||| | || ||||||||| | || ||| |||||||||||| ||||| ||| Sbjct 503413 CAAAGATTGATCTTCGCAGGTAAGCAGTTGGAGGATGGCAGAACTTTATCTGATTACAAT 503354 Query 156003 ATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 || ||||| || | || || || | || || ||||||||||| ||| Sbjct 503353 AT--CCAAAAGGAATCAACTCTACACCTCGTTTTGAGATTAAGAGGTGGT 503306 Score = 136 bits (150), Expect = 6e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| |||||| |||| || | ||||| || ||||||||| | || || ||| ||| Sbjct 502849 ATGCAGATATTTGTTAAGACTCTTACTGGTAAGACTATTACACTTGAGGTTGAATCCTCT 502790 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | ||| ||||| || || || || ||||||||||| || || || || ||| Sbjct 502789 GACACTATCGACAACGTAAAGTCGAAGATCCAGGATAAAGAAGGTATCCCACCTGACCAA 502730 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 ||||||||||| | ||| ||||||||||| || ||| |||||| |||| || ||||| Sbjct 502729 CAAAGATTGATCTTTGCAGGTAAGCAGCTGGAGGATGGAAGAACTCTATCTGACTATAAC 502670 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 || |||||| | || | ||| | || || ||| ||||||| ||| Sbjct 502669 ATTCAAAAAGAGTCAACTTTGCATCTGGTTTTGAGACTAAGAGGTGGT 502622 Score = 136 bits (150), Expect = 6e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| |||||| |||| || | ||||| || ||||||||| | || || ||| ||| Sbjct 503077 ATGCAGATATTTGTTAAGACTCTTACTGGTAAGACTATTACACTTGAGGTTGAATCCTCT 503018 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | ||| ||||| || || || || ||||||||||| || || || || ||| Sbjct 503017 GACACTATCGACAACGTAAAGTCGAAGATCCAGGATAAAGAAGGTATCCCACCTGACCAA 502958 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 ||||||||||| | ||| ||||||||||| || ||| |||||| |||| || ||||| Sbjct 502957 CAAAGATTGATCTTTGCAGGTAAGCAGCTGGAGGATGGAAGAACTCTATCTGACTATAAC 502898 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 || |||||| | || | ||| | || || ||| ||||||| ||| Sbjct 502897 ATTCAAAAAGAGTCAACTTTGCATCTGGTTTTGAGACTAAGAGGTGGT 502850 Score = 132 bits (146), Expect = 7e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| |||||| |||| || | || || || ||||||||| | ||||| ||| ||| Sbjct 502393 ATGCAGATATTTGTTAAGACTCTTACCGGTAAGACTATTACACTCGAAGTTGAATCCTCT 502334 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| ||| || || ||| || || || || || || ||||| || || || ||| Sbjct 502333 GATACCATTGACAATGTCAAATCCAAGATTCAGGACAAGGAGGGCATTCCGCCCGACCAA 502274 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || |||||||| | ||| |||||||| || || ||| |||||| | || || || || Sbjct 502273 CAGAGATTGATCTTTGCAGGTAAGCAACTGGAGGATGGAAGAACTCTTTCTGACTACAAC 502214 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 || |||||| |||| || ||| | ||| ||||||||||||| ||| Sbjct 502213 ATTCAAAAAGAGTCGACCCTACATCTTGTGCTAAGATTAAGAGGTGGT 502166 Score = 132 bits (146), Expect = 7e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| |||||| |||| || | ||||| || ||||||||| | || || ||| ||| Sbjct 502621 ATGCAGATATTTGTTAAGACTCTTACTGGTAAGACTATTACACTTGAGGTTGAATCCTCT 502562 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | ||| ||||| || || || || ||||||||||| || || || || ||| Sbjct 502561 GACACTATCGACAACGTAAAGTCGAAGATCCAGGATAAAGAAGGTATCCCACCTGACCAA 502502 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 ||||||||||| | ||| ||||||||||| || ||| |||||| | || || ||||| Sbjct 502501 CAAAGATTGATCTTTGCAGGTAAGCAGCTGGAGGATGGAAGAACTCTGTCTGACTATAAC 502442 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 || |||||| | || | || || || || ||| ||||||| ||| Sbjct 502441 ATTCAAAAAGAGTCAACTTTGCACTTGGTTTTGAGACTAAGAGGTGGT 502394 >seq14 Length=1283838 Score = 127 bits (140), Expect = 3e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| |||| || | ||||| || ||||||||| | || || ||| ||| Sbjct 778514 ATGCAGATTTTTGTTAAGACTCTTACTGGTAAGACTATTACACTTGAGGTTGAATCCTCT 778573 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | ||| |||||||| || || |||||||||||||| || || || || || Sbjct 778574 GACACTATCGACAACGTGAAGTCGAAGATCCAAGATAAAGAAGGTATCCCACCTGATCAG 778633 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 ||||| || || | ||| || || ||| | || ||| ||||||||| || ||||| ||| Sbjct 778634 CAAAGGTTAATCTTTGCAGGAAAACAGTTAGAGGATGGCAGAACTTTGTCTGATTACAAT 778693 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 || ||||| | || || ||| | || || ||||||||||| ||| Sbjct 778694 ATCCAAAAAGAATCAACCCTGCATCTGGTTTTGAGATTAAGAGGTGGT 778741 Score = 109 bits (120), Expect = 8e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| |||| || | ||||| || ||||| ||| | || || ||| ||| Sbjct 778970 ATGCAGATTTTTGTTAAGACTCTTACTGGTAAGACTATAACACTTGAGGTTGAATCCTCT 779029 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | || |||||||| || || || || || || ||||| || || || ||| Sbjct 779030 GACACAATCGACAACGTGAAGTCGAAGATTCAGGACAAGGAGGGCATTCCGCCCGACCAA 779089 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || |||||||| | ||| ||||||||||| || ||| |||||| | || || ||||| Sbjct 779090 CAGAGATTGATCTTTGCTGGTAAGCAGCTGGAGGATGGAAGAACTCTTTCTGACTATAAC 779149 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 || ||||| | || || || | || || ||||||||||| ||| Sbjct 779150 ATTCAAAAAGAATCTACCCTGCACCTGGTTTTGAGATTAAGAGGTGGT 779197 Score = 100 bits (110), Expect = 4e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| | || || | ||||| || |||||||| | || || || |||| Sbjct 779198 ATGCAGATTTTTGTCAAGACCCTTACTGGTAAGACTATTACGCTGGAGGTAGAGTCTTCT 779257 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | ||| || || || || || || ||||||||||| || || || || ||| Sbjct 779258 GACACTATCGACAATGTAAAGTCGAAGATCCAGGATAAAGAAGGTATCCCACCTGACCAA 779317 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || ||| |||| | || ||||||||||| || ||| |||||| | || || || || Sbjct 779318 CAGAGACTGATCTTCGCAGGTAAGCAGCTGGAGGATGGAAGAACTCTTTCTGACTACAAC 779377 Query 156003 ATATCCAAA-GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 || || ||| ||| | || || ||| | || ||||||| ||||| ||| Sbjct 779378 AT-TCAAAAGGAGTCAACCCTGCATCTTGTCCTAAGATTGAGAGGTGGT 779425 Score = 96.9 bits (106), Expect = 5e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| | || || | ||||| || |||||||| | || || || |||| Sbjct 778742 ATGCAGATTTTTGTCAAGACCCTTACTGGTAAGACTATTACGCTGGAGGTAGAGTCTTCT 778801 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | ||| || || || || || || ||||||||||| || || || || ||| Sbjct 778802 GACACTATCGACAATGTAAAGTCGAAGATCCAGGATAAAGAAGGTATTCCACCTGACCAA 778861 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || ||| |||| | || ||||||||||| || ||| |||||| | || || || || Sbjct 778862 CAGAGACTGATCTTCGCAGGTAAGCAGCTGGAGGATGGAAGAACTCTTTCTGACTACAAC 778921 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 || ||||| | || || || | || || ||||||||||| ||| Sbjct 778922 ATTCAAAAAGAATCTACCCTGCACCTGGTTTTGAGATTAAGAGGTGGT 778969 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731871835328800