Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20parabailii_20[genbank_20GCA_5F001984395.2_202017 -03-16] 18 sequences; 20,864,403 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq14 199 1e-45 seq9 183 9e-41 seq15 127 6e-24 seq6 107 6e-18 >seq14 Length=1283838 Score = 199 bits (220), Expect = 1e-45 Identities = 387/568 (68%), Gaps = 9/568 (2%) Strand=Plus/Minus Query 155969 CTCCTCATCGCCGTGATTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGG 156028 |||||| | ||||||||||||| | || | ||| || |||||| | || || Sbjct 991020 CTCCTCCTTACCGTGATTCTTCCTAATGTCGATGAAGTCGAAAATATCTGCGTGCCAAGG 990961 Query 156029 CTCCAGATACATAGCAAAACTACCATTCCTCTTG---CCACCCTGATCTACATACCGAGC 156085 ||||| ||| | |||||| || || || ||||| || || ||||||| ||| Sbjct 990960 CTCCAAATATAGGGCAAAAGCGCCTGGTCTTTTATTACCACCTTGGTCCACATACCTAGC 990901 Query 156086 AGTCTTATTGAAGACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCG 156145 || ||||| ||||||| | |||||| || | ||||| || || |||||||| || Sbjct 990900 GGTATTATTAAAGACACGAATCATAGGGATTAACCCATTAGATGTACCATTGGTACCAGC 990841 Query 156146 AATATGCGAACCAGATGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCATTT 156205 ||||| |||||||| ||||| | ||| || ||||| | ||||||||||| | || Sbjct 990840 AATATACGAACCAGTGGAGCGGATATTGTGGATATGCAAACCAATACCACCAGCAGTCTT 990781 Query 156206 AGAAATTTGAGCGCATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCAT 156265 ||||| ||| ||||| || | ||| | | ||||| || ||||||||||||| ||| Sbjct 990780 GGAAATCATAGCACATTCTTTGAGAGTGTCATAGATACCCTCGATAGAATCATCTTTCAT 990721 Query 156266 TGATAGTAGATAGCACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGG 156325 | || || | || ||| | ||||| |||| ||||| || |||||||| ||||| Sbjct 990720 GGCTACCAGGAAACAAGAAGCCATCTGAGGATGTGGAGTTCCTGCATTGAATAGCGTAGG 990661 Query 156326 TGTTGCATGAATAAAATACTTATTAGACATATAATCGTATGTCTCCTTAAT--CT-TCTC 156382 | |||||||| |||||| | |||||| | ||| ||||| ||| || || Sbjct 990660 GGAAGCATGAATGAAATACCTTAAAGACATGAGGTTGTAAGTCTC---AATGGCTGCCTT 990604 Query 156383 AAGATTAGACCCGTGAATACAGATAGAGACCCTCATCCACATATGCTGAGGACGCTCTAC 156442 || || | |||||||| | | || || ||||| | ||| ||||| | ||| | Sbjct 990603 AATATCATCACCGTGAATGCCAAGCGAAACTCTCATTATTAAATGTTGAGGTCTCTCAGC 990544 Query 156443 AATCACTCCATCAATTCGCAGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAATAATC 156502 | | |||| |||| || | ||||| ||||||| ||| || || || || |||| Sbjct 990543 GACTGCACCATTAATTTTAAGCAAGTATGAACGTTCCAAAGTCTTGAAACCAAAGTAATT 990484 Query 156503 AAACAGAAAATCACGGTTGTAATCAATC 156530 ||| | ||||| | | ||| ||||| Sbjct 990483 GAACTGGAAATCTCTATCGTAGACAATC 990456 >seq9 Length=2005801 Score = 183 bits (202), Expect = 9e-41 Identities = 380/565 (67%), Gaps = 3/565 (1%) Strand=Plus/Plus Query 155969 CTCCTCATCGCCGTGATTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGG 156028 |||||| | |||||||| |||| | || | || || |||||||| || || Sbjct 289956 CTCCTCCTTACCGTGATTTTTCCTAATGTCGATAAAATCAAAAATATCAGCGTGCCAGGG 290015 Query 156029 CTCCAGATACATAGCAAAACTACCATTCCTCTTG---CCACCCTGATCTACATACCGAGC 156085 ||||| ||| | |||||| ||| || || ||||| || || ||||||||||| Sbjct 290016 CTCCAAATATAGGGCAAAAGCGCCAGGTCTTTTATTACCACCTTGGTCCACATACCGAGC 290075 Query 156086 AGTCTTATTGAAGACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCG 156145 ||| ||||| || |||| | ||| || || | ||||| || || || ||||| || Sbjct 290076 AGTATTATTAAAAACACGAATCATGGGGATTAGTCCATTAGATGTACCGTTGGTACCAGC 290135 Query 156146 AATATGCGAACCAGATGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCATTT 156205 ||||| |||||||| ||| || | ||| || ||||| | ||||||||||| | || Sbjct 290136 AATATACGAACCAGTTGAACGGATATTGTGGATATGCAAACCAATACCACCAGCAGTCTT 290195 Query 156206 AGAAATTTGAGCGCATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCAT 156265 || || ||| ||||| |||| ||| | | ||||| || ||||| ||||||| ||| Sbjct 290196 GGAGATCATAGCACATTCTTTTAGAGTGTCATAGATACCCTCGATAGAGTCATCTTTCAT 290255 Query 156266 TGATAGTAGATAGCACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGG 156325 | || || |||| ||| | ||||| |||| ||||| || |||||||| ||||| Sbjct 290256 GGCTACCAGGAAGCAAGAAGCCATCTGAGGATGTGGGGTTCCTGCATTGAATAGCGTAGG 290315 Query 156326 TGTTGCATGAATAAAATACTTATTAGACATATAATCGTATGTCTCCTTAATCTTCTCAAG 156385 | || || || |||||| | |||||| | ||| ||||| || || || Sbjct 290316 GGAAGCGTGGATGAAATACCTTAGAGACATTAGGTTGTAAGTCTCAATAGCTGCCTTAAT 290375 Query 156386 ATTAGACCCGTGAATACAGATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAAT 156445 || | || ||||| | | || || ||||| | ||| ||||| | ||| | | Sbjct 290376 ATCATCACCATGAATGCCAAGCGAAACTCTCATTATTAAATGTTGAGGTCTCTCAGCGAC 290435 Query 156446 CACTCCATCAATTCGCAGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAATAATCAAA 156505 |||| |||| || | ||||| ||||||| ||| || || ||||| |||| || Sbjct 290436 TGAACCATTAATTTTAAGCAAGTATGAACGTTCCAAAGTCTTGAAACCGAAGTAATTGAA 290495 Query 156506 CAGAAAATCACGGTTGTAATCAATC 156530 | | ||||| | | ||| ||||| Sbjct 290496 CTGGAAATCTCTATCGTAGACAATC 290520 Score = 102 bits (112), Expect = 2e-16 Identities = 218/326 (67%), Gaps = 0/326 (0%) Strand=Plus/Minus Query 302491 TCAATTCCGTCATCGCCGTAGGAATACTGAATGATTTTGTTCTTGTTATTTCTTACGGTC 302550 || || || || || |||||| | ||||||| || ||| | |||||| || Sbjct 1026722 TCCATCCCATCTTCACCGTAGATAAACTGAATAATGTTGCCCAATGAATTTCTGGTTGTT 1026663 Query 302551 ATATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCA 302610 ||| || || ||| || || |||| | || | |||||||| || || || || Sbjct 1026662 CCATCGTAGTGAACCATGATATCCTCCAAAGCTTTTACCAAACGACGTTGGATGTACCCT 1026603 Query 302611 GTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAG 302670 ||| | |||||| || ||||| || || | ||| |||| |||||||| ||||| ||| Sbjct 1026602 GTTTCTGCTGTTTTAACTGCTGTGTCGATCAAACCCTCACGGCCACCCATCGCATGAAAG 1026543 Query 302671 AATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCG 302730 || | ||||| || || |||| | | ||||| |||| |||||||| | |||| Sbjct 1026542 AAAAACTCTTGAGGAGTAAGGCCCCTCAGATAGGAGTTCTCTACGAAACCCTTTGACTCG 1026483 Query 302731 GGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATA 302790 ||||||| || ||| | ||| || |||| || | | | | | || | | |||| Sbjct 1026482 GGCGAATAATCATCCTTAGAAAAATGAGGCAAAGTACGATCCACGAACCCAAAAGCGATA 1026423 Query 302791 CGCTTTCCATCAACGTTCTGCTGTCC 302816 ||||| || || ||| |||||| || Sbjct 1026422 CGCTTACCTTCCACGGACTGCTGCCC 1026397 Score = 98.7 bits (108), Expect = 3e-15 Identities = 105/138 (76%), Gaps = 3/138 (2%) Strand=Plus/Minus Query 301815 AATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCAAA 301874 |||||||| | ||| || |||||| || || || |||||| ||||||||||| || Sbjct 1027413 AATTTCTTTCAAACGTGGTACACCAGATGTAACCTT---CTTGGAGGCAACACCAGCGAA 1027357 Query 301875 GTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATCAT 301934 ||||||||| |||| ||| | |||||||| ||||||||| || ||| || || | || Sbjct 1027356 GTGGAAAGTGTTCAAAGTCATTTGAGTAGCTGGCTCACCGATGGATTGGGCGGCCAGCAC 1027297 Query 301935 ACCAACCATTTCTCCTGG 301952 || |||||||| || || Sbjct 1027296 TCCGACCATTTCACCAGG 1027279 >seq15 Length=1249162 Score = 127 bits (140), Expect = 6e-24 Identities = 226/328 (69%), Gaps = 4/328 (1%) Strand=Plus/Plus Query 302491 TCAATTCCGTCATCGCCGTAGGAAT--ACTGAATGATTTTGTTCTTGTTATTTCTTACGG 302548 || || ||||| || ||||| ||| |||||||||| ||| | |||||| | Sbjct 847448 TCCATCCCGTCTTCACCGTA--AATGAACTGAATGATGTTGCCCAATGAATTTCTGGTTG 847505 Query 302549 TCATATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAAC 302608 | ||||| || ||| || || || | | || | ||||||||| || || |||| Sbjct 847506 TTCCGTCATAGTGAACCATGATATCCTCTAAAGCTTTTACTAAACGACGTTGGATGTAAC 847565 Query 302609 CAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGA 302668 | ||| | |||||| || |||||||| || | ||| ||||||||||||| ||||| | Sbjct 847566 CTGTTTCTGCTGTTTTAACTGCTGTATCGATCAAACCCTCACGACCACCCATTGCATGAA 847625 Query 302669 AGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCT 302728 |||| | ||||| || || |||| | | ||||| |||| |||||||| | || Sbjct 847626 AGAAAAACTCTTGGGGAGTAAGGCCCCTCAGATAGGAGTTCTCTACGAAACCCTTTGACT 847685 Query 302729 CGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGA 302788 ||||||||| ||| || | ||| || |||| || | | | | | ||| ||| || Sbjct 847686 CGGGCGAATAGTCATCTTTAGAAAAATGAGGCAAAGTACGATCCACGAACCCGAATGCGA 847745 Query 302789 TACGCTTTCCATCAACGTTCTGCTGTCC 302816 ||||||| || || ||| |||||| || Sbjct 847746 TACGCTTACCTTCCACGGACTGCTGCCC 847773 Score = 98.7 bits (108), Expect = 3e-15 Identities = 105/138 (76%), Gaps = 3/138 (2%) Strand=Plus/Plus Query 301815 AATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCAAA 301874 |||||||| | ||| || |||||| || || || |||||| ||||||||||| || Sbjct 846757 AATTTCTTTCAAACGTGGCACACCAGAAGTAACCTT---CTTGGAGGCAACACCAGCGAA 846813 Query 301875 GTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATCAT 301934 ||||||||| |||| ||| | |||||||| ||||||||| || ||| || || | || Sbjct 846814 GTGGAAAGTGTTCAAAGTCATTTGAGTAGCTGGCTCACCGATGGATTGGGCAGCCAGCAC 846873 Query 301935 ACCAACCATTTCTCCTGG 301952 || |||||||| || || Sbjct 846874 TCCGACCATTTCACCAGG 846891 >seq6 Length=1007293 Score = 107 bits (118), Expect = 6e-18 Identities = 122/164 (74%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 155583 AGACCAATAGACGCCAGATTACATACCGCAGTCTCCTTGTCGTCGCTGTATTCTACAATC 155642 ||| ||| ||| || | ||| || || || ||||| || || ||||| ||||| || Sbjct 907843 AGAGCAACAGATGCTAAATTGCAAACAGCTGTCTCATTTTCAGAACTGTACTCTACTATT 907902 Query 155643 TCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTA 155702 ||||| || ||||| || ||||| ||||||||||| || ||||| |||||| ||| Sbjct 907903 TCACAACAGAGGTTGGAGGATTTGATCGTGCCTAAATTTTTTTGGTTCGATTTAGAGTTG 907962 Query 155703 CAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTG 155746 ||| |||||||||| || ||| | || ||||||||| | ||| Sbjct 907963 CAAACATCCTTGTAGAGCATGAAAGGCCCTCCTGTCTCTACCTG 908006 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471817260562066