Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20parabailii_20[genbank_20GCA_5F001984395.2_202017 -03-16] 18 sequences; 20,864,403 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq9 122 7e-23 seq14 113 4e-20 seq16 84.2 2e-11 >seq9 Length=2005801 Score = 122 bits (134), Expect = 7e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||| || ||||| ||||| || ||||| || || ||||| | || |||| || Sbjct 503305 ATGCAGATTTTTGTTAAAACATTGACCGGTAAGACTATTACATTAGAGGTGGAGTCTTCT 503246 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || ||| ||| | | ||||| |||||| || |||||||| | || || ||| Sbjct 503245 GACACTATCGACAACGTAAAGTCGAAGATCCAAGATAAAGAAGGTATCCCACCTGACCAA 503186 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 |||||| | || | ||| ||||| ||||||||||||| ||||| | | || || ||| Sbjct 503185 CAAAGATTGATCTTTGCAGGTAAGCAGCTGGAGGATGGAAGAACTCTATCTGACTATAAC 503126 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 ||||||||||| || || ||||| |||| || ||||| |||| || Sbjct 503125 ATTCAAAAAGAGTCAACTTTGCATCTGGTTTTGAGACTAAGAGGTGG 503079 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||| |||||||| || ||| | || || || || ||||| | || || | Sbjct 502621 ATGCAGATATTTGTTAAGACTCTTACTGGTAAGACTATTACACTTGAGGTTGAATCCTCT 502562 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || ||| ||| | | ||||| |||||| || |||||||| | || || ||| Sbjct 502561 GACACTATCGACAACGTAAAGTCGAAGATCCAGGATAAAGAAGGTATCCCACCTGACCAA 502502 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 |||||| | || | ||| ||||| ||||||||||||| ||||| || | || || ||| Sbjct 502501 CAAAGATTGATCTTTGCAGGTAAGCAGCTGGAGGATGGAAGAACTCTGTCTGACTATAAC 502442 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 ||||||||||| || || |||||| |||| || ||||| |||| || Sbjct 502441 ATTCAAAAAGAGTCAACTTTGCACTTGGTTTTGAGACTAAGAGGTGG 502395 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||| |||||||| || ||| | || || || || ||||| | || || | Sbjct 502849 ATGCAGATATTTGTTAAGACTCTTACTGGTAAGACTATTACACTTGAGGTTGAATCCTCT 502790 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || ||| ||| | | ||||| |||||| || |||||||| | || || ||| Sbjct 502789 GACACTATCGACAACGTAAAGTCGAAGATCCAGGATAAAGAAGGTATCCCACCTGACCAA 502730 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 |||||| | || | ||| ||||| ||||||||||||| ||||| | | || || ||| Sbjct 502729 CAAAGATTGATCTTTGCAGGTAAGCAGCTGGAGGATGGAAGAACTCTATCTGACTATAAC 502670 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 ||||||||||| || || ||||| |||| || ||||| |||| || Sbjct 502669 ATTCAAAAAGAGTCAACTTTGCATCTGGTTTTGAGACTAAGAGGTGG 502623 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||| |||||||| || ||| | || || || || ||||| | || || | Sbjct 503077 ATGCAGATATTTGTTAAGACTCTTACTGGTAAGACTATTACACTTGAGGTTGAATCCTCT 503018 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || ||| ||| | | ||||| |||||| || |||||||| | || || ||| Sbjct 503017 GACACTATCGACAACGTAAAGTCGAAGATCCAGGATAAAGAAGGTATCCCACCTGACCAA 502958 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 |||||| | || | ||| ||||| ||||||||||||| ||||| | | || || ||| Sbjct 502957 CAAAGATTGATCTTTGCAGGTAAGCAGCTGGAGGATGGAAGAACTCTATCTGACTATAAC 502898 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 ||||||||||| || || ||||| |||| || ||||| |||| || Sbjct 502897 ATTCAAAAAGAGTCAACTTTGCATCTGGTTTTGAGACTAAGAGGTGG 502851 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||| |||||||| || ||| | ||||| || || ||||| ||||| || | Sbjct 502393 ATGCAGATATTTGTTAAGACTCTTACCGGTAAGACTATTACACTCGAAGTTGAATCCTCT 502334 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 ||||| | | | | || ||| |||||| ||||| || ||| | || || ||| Sbjct 502333 GATACCATTGACAATGTCAAATCCAAGATTCAGGACAAGGAGGGCATTCCGCCCGACCAA 502274 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || ||| | || | ||| ||||| || |||||||||| ||||| | | || |||||| Sbjct 502273 CAGAGATTGATCTTTGCAGGTAAGCAACTGGAGGATGGAAGAACTCTTTCTGACTACAAC 502214 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 ||||||||||| || || | || | ||| ||||| | |||| || Sbjct 502213 ATTCAAAAAGAGTCGACCCTACATCTTGTGCTAAGATTAAGAGGTGG 502167 >seq14 Length=1283838 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||| || |||||||| || | || || || || ||||| | || ||| || Sbjct 778742 ATGCAGATTTTTGTCAAGACCCTTACTGGTAAGACTATTACGCTGGAGGTAGAGTCTTCT 778801 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || ||| ||| | | ||||| |||||| || |||||||| | || || ||| Sbjct 778802 GACACTATCGACAATGTAAAGTCGAAGATCCAGGATAAAGAAGGTATTCCACCTGACCAA 778861 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || ||||| || | || ||||| ||||||||||||| ||||| | | || |||||| Sbjct 778862 CAGAGACTGATCTTCGCAGGTAAGCAGCTGGAGGATGGAAGAACTCTTTCTGACTACAAC 778921 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 ||||||||||||||||| ||||| |||| || ||| | |||| || Sbjct 778922 ATTCAAAAAGAATCTACCCTGCACCTGGTTTTGAGATTAAGAGGTGG 778968 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||| || |||||||| || | || || || || ||||| | || ||| || Sbjct 779198 ATGCAGATTTTTGTCAAGACCCTTACTGGTAAGACTATTACGCTGGAGGTAGAGTCTTCT 779257 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || ||| ||| | | ||||| |||||| || |||||||| | || || ||| Sbjct 779258 GACACTATCGACAATGTAAAGTCGAAGATCCAGGATAAAGAAGGTATCCCACCTGACCAA 779317 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || ||||| || | || ||||| ||||||||||||| ||||| | | || |||||| Sbjct 779318 CAGAGACTGATCTTCGCAGGTAAGCAGCTGGAGGATGGAAGAACTCTTTCTGACTACAAC 779377 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 |||||||| || || || |||| | || ||||| || |||| || Sbjct 779378 ATTCAAAAGGAGTCAACCCTGCATCTTGTCCTAAGATTGAGAGGTGG 779424 Score = 93.3 bits (102), Expect = 3e-14 Identities = 107/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 110356 GAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAACAAAGACTTATTTATGCGGGTAA 110415 ||||||| ||||| || ||| | || || ||||| ||| | || | ||| ||||| Sbjct 779053 GAAGATTCAGGACAAGGAGGGCATTCCGCCCGACCAACAGAGATTGATCTTTGCTGGTAA 779112 Query 110416 ACAGCTGGAGGATGCCAGAACAATGGCGGATTACAACATTCAAAAAGAATCTACGTTGCA 110475 ||||||||||||| ||||| | | || || |||||||||||||||||||| |||| Sbjct 779113 GCAGCTGGAGGATGGAAGAACTCTTTCTGACTATAACATTCAAAAAGAATCTACCCTGCA 779172 Query 110476 CATGGTGTTAAGACTGCGAGGGGG 110499 | |||| || ||| | |||| || Sbjct 779173 CCTGGTTTTGAGATTAAGAGGTGG 779196 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||| || ||||| || ||| | || || || || ||||| | || || | Sbjct 778514 ATGCAGATTTTTGTTAAGACTCTTACTGGTAAGACTATTACACTTGAGGTTGAATCCTCT 778573 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || ||| ||| | | || || |||||| || |||||||| | || ||||| Sbjct 778574 GACACTATCGACAACGTGAAGTCGAAGATCCAAGATAAAGAAGGTATCCCACCTGATCAG 778633 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 ||||| | || | ||| || |||||| | ||||||| |||||| || | |||||||| Sbjct 778634 CAAAGGTTAATCTTTGCAGGAAAACAGTTAGAGGATGGCAGAACTTTGTCTGATTACAAT 778693 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 || ||||||||||| || |||| |||| || ||| | |||| || Sbjct 778694 ATCCAAAAAGAATCAACCCTGCATCTGGTTTTGAGATTAAGAGGTGG 778740 >seq16 Length=1240939 Score = 84.2 bits (92), Expect = 2e-11 Identities = 97/131 (74%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 107180 GGCTTCCACGTGCACGAATTTGGCGACACCAGCAACGGCTGTACGTCCGCCGGTGAACAC 107239 || |||||| | ||||| || || |||| || ||||| ||||| || |||||| ||| Sbjct 605812 GGGTTCCACATCCACGAGTTCGGTGACAACACTAACGGGTGTACATCTGCCGGTCCTCAC 605753 Query 107240 TTCAATCCCACATACCAAAATCACGGTGCGCCCGACGCCGTAGAAAGGCACGTCGGCGAT 107299 || || ||| | | | | |||||||| || || |||| | |||||||||||||| Sbjct 605752 TTTAACCCCCTAGGCAAGACACACGGTGCTCCTGAGGCCGATGTGAGGCACGTCGGCGAC 605693 Query 107300 CTGGGCAACGT 107310 |||||||| || Sbjct 605692 CTGGGCAATGT 605682 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412841509432874