Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20parabailii_20[genbank_20GCA_5F001984395.2_202017 -03-16] 18 sequences; 20,864,403 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq12 127 3e-23 seq1 114 2e-19 >seq12 Length=1443312 Score = 127 bits (140), Expect = 3e-23 Identities = 232/333 (70%), Gaps = 9/333 (3%) Strand=Plus/Plus Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400 ||||| || | || ||| || ||||| |||| ||||| ||||||||||| ||| Sbjct 767699 CCTTCATCTCTACAGATTAACTCGTTTGAAAAGGTCAGGCCTGGCATGAGGCCCTTCTTT 767758 Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460 ||||||||||||||||| ||| |||||||||||||| || || || |||||||| Sbjct 767759 TTGAGCCAAAAGATGGCGGCAAAAGATCCCGAGAAAAAGATACCTTCTACTGCGGCAAAT 767818 Query 794461 CCGACGAGCCGCTCGGC-AAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCA 794519 | || |||| ||| || |||| | | | | ||| | |||||| | || ||||| Sbjct 767819 GCCACCAGCCTCTCAGCGTAAAGAG-CATTGTCATCT---TGAATCCACCTGATAGCCCA 767874 Query 794520 CTCTGCCTTTTTCCTCA-CCGAGGGCACCGTG-TCGATGGCGCGAAAGAGGTGGTCCTTC 794577 ||| ||||||| | | | | ||||| ||| || || || ||| | | ||| Sbjct 767875 CTCAGCCTTTTCCTTGATCTGAGGG--ATGTGCTCAATCGCATTAAACAAGAAATCCCGT 767932 Query 794578 TCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTT 794637 || || ||||||| ||| || ||||| | | ||||| ||||| || ||||| ||| Sbjct 767933 TCCTTAGGATCCTTGATGTATGTCTCGATTAATAATGAGTAAGTCTCCGAATGGATATTT 767992 Query 794638 TCGATGGCGATCTGGAAGCCATAAAAGCAGTTG 794670 || || ||||||||| || || || || ||| Sbjct 767993 TCCATCATGATCTGGAACCCGTAGAAACATTTG 768025 Score = 89.7 bits (98), Expect = 8e-12 Identities = 100/133 (75%), Gaps = 2/133 (2%) Strand=Plus/Plus Query 794009 GAGCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTT 794068 ||||||| ||||| | ||| || || || |||| |||||| ||| || ||||| || Sbjct 767496 GAGCGACC--AGCAGCCTGTCTGCTACAAACTCAACGTACTGATTCATCAGCGCGGCATT 767553 Query 794069 CATGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGC 794128 |||||| | || |||||||| |||| ||| ||| | || ||||||||||||||| || Sbjct 767554 CATGCCCAGCAGAGCCACGGGGAGCGCGTCGATGAAATACCTTTTCTCGATCTCGACAGC 767613 Query 794129 CTCGATGATGATC 794141 || | |||||| Sbjct 767614 TTCTGTAATGATC 767626 >seq1 Length=2110500 Score = 114 bits (126), Expect = 2e-19 Identities = 228/332 (69%), Gaps = 7/332 (2%) Strand=Plus/Plus Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400 || || || | || |||||| ||||| |||| ||||| |||||||| || ||| Sbjct 1034104 CCCTCATCTCTACAGATCAACTCGTTTGAAAAGGTCAGGCCAGGCATGAGACCTTTCTTT 1034163 Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460 |||||||||||||| || || |||||||||||||| || || || |||||||| Sbjct 1034164 TTGAGCCAAAAGATTGCGGCAAACGACCCCGAGAAAAAGATACCTTCTACTGCGGCAAAT 1034223 Query 794461 CCGACGAGCCGCTCGGC-AAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCA 794519 | || | || ||| || |||| | | | | ||| | |||||| | || ||||| Sbjct 1034224 GCCACCAACCTCTCAGCGTAAAGAG-CATTGTCATCT---TGAATCCACCTGATGGCCCA 1034279 Query 794520 CTCTGCCTTTTTCCTCA-CCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTCT 794578 ||| ||||||| | | | | ||||| || || ||||| ||| | | ||| | Sbjct 1034280 CTCAGCCTTTTCCTTGATCTGAGGGATGTGT-TCAATGGCATTAAACAAGAAATCCCGTT 1034338 Query 794579 CGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTT 794638 | || ||||||| ||| || ||||| || | ||||| ||||| || ||||| |||| Sbjct 1034339 CCTTAGGATCCTTGATGTATGTCTCGATAAGTAATGAGTAAGTCTCCGAATGGATATTTT 1034398 Query 794639 CGATGGCGATCTGGAAGCCATAAAAGCAGTTG 794670 | || |||||| || || || || || ||| Sbjct 1034399 CCATCATGATCTGAAACCCGTAGAAACATTTG 1034430 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916244485257902