Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20parabailii_20[genbank_20GCA_5F001984395.2_202017 -03-16] 18 sequences; 20,864,403 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq10 87.8 1e-12 seq4 84.2 1e-11 >seq10 Length=1751495 Score = 87.8 bits (96), Expect = 1e-12 Identities = 159/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580 ||||||||||||| | | |||||| || | || || || || ||||| || || | Sbjct 575188 CACCACCTCTCAATCTAAGCACCAAGTGCAAGGTAGATTCCTTCTGAATGTTATAGTCAG 575247 Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640 | | || | | || |||||||| || || ||||| ||||| | ||||||||| | | Sbjct 575248 ACAAGGTTCTGCCATCCTCCAATTGCTTACCAGCAAAGATCAATCTCTGCTGATCAGGTG 575307 Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699 | | |||||| ||||| ||| || || | |||| ||| | ||||| || || Sbjct 575308 GAATACCTTCCTTGTCTTGAATCTT-TGACTTGACATTGTCGATAGTGTCAGAAGACTCG 575366 Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || |||| || || || ||||| || || || || || || |||||||| Sbjct 575367 ACTTCAAGGGTAATAGTCTTACCCGTCAAGGTCTTGACGAAAATCTGCAT 575416 >seq4 Length=1091360 Score = 84.2 bits (92), Expect = 1e-11 Identities = 158/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580 ||||||||||||| | | |||||| || | |||| || || || ||||| || || | Sbjct 719716 CACCACCTCTCAATCTAAGCACCAAGTGCAAAGTGGATTCCTTCTGGATGTTATAGTCAG 719775 Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640 | | || | | || |||||||| || || || || ||||| | |||||| || | | Sbjct 719776 ACAACGTTCTGCCATCCTCCAATTGCTTACCAGCGAAGATCAATCTCTGCTGGTCAGGTG 719835 Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699 | | |||||| ||||| ||| || | | ||||| ||| | ||||| || || Sbjct 719836 GGATACCTTCCTTGTCTTGAATCTT-GGACTTAACATTGTCGATAGTGTCAGAAGACTCG 719894 Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || || | || || || ||||| || || || || || || |||||||| Sbjct 719895 ACTTCGAGGGTAATAGTCTTACCCGTCAAGGTCTTGACGAAAATCTGCAT 719944 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328703927890560