Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20parabailii_20[genbank_20GCA_5F001984395.2_202017 -03-16] 18 sequences; 20,864,403 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq9 118 3e-21 seq6 98.7 2e-15 seq14 89.7 1e-12 seq13 89.7 1e-12 seq4 87.8 4e-12 seq10 84.2 5e-11 >seq9 Length=2005801 Score = 118 bits (130), Expect = 3e-21 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| ||||| | || || || || || || || || ||||| ||||||| Sbjct 503302 CAGATTTTTGTTAAAACATTGACCGGTAAGACTATTACATTAGAGGTGGAGTCTTCTGAC 503243 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| |||||| ||||| ||||| |||||||| || || ||| ||| Sbjct 503242 ACTATCGACAACGTAAAGTCGAAGATCCAAGATAAAGAAGGTATCCCACCTGACCAACAA 503183 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 ||| | ||||| || || |||||| |||| |||||||| ||| | | || || ||| | Sbjct 503182 AGATTGATCTTTGCAGGTAAGCAGCTGGAGGATGGAAGAACTCTATCTGACTATAACATT 503123 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACT 206387 || |||||||| ||| | || || ||||||||||| Sbjct 503122 CAAAAAGAGTCAACTTTGCATCTGGTTTTGAGACT 503088 Score = 114 bits (126), Expect = 3e-20 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| || || || || || || || || || | || || ||| |||||| Sbjct 503530 CAGATTTTTGTTAAGACTCTTACTGGTAAGACTATTACACTTGAGGTCGAATCCTCTGAC 503471 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| |||||| ||||| || || |||||||| || || || ||| Sbjct 503470 ACTATCGACAACGTAAAGTCGAAGATCCAGGATAAAGAAGGCATCCCACCTGATCAGCAA 503411 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 ||| | |||||||| || ||||||||||| ||||| || ||||| | |||||||| || Sbjct 503410 AGATTGATCTTCGCAGGTAAGCAGTTGGAGGATGGCAGAACTTTATCTGATTACAATATC 503351 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 206385 || || || || ||||| ||||| ||||||||| Sbjct 503350 CAAAAGGAATCAACTCTACACCTCGTTTTGAGA 503318 Score = 113 bits (124), Expect = 1e-19 Identities = 154/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||||||| || || || || || || || || || | || || ||| |||||| Sbjct 502618 CAGATATTTGTTAAGACTCTTACTGGTAAGACTATTACACTTGAGGTTGAATCCTCTGAC 502559 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| |||||| ||||| || || |||||||| || || ||| ||| Sbjct 502558 ACTATCGACAACGTAAAGTCGAAGATCCAGGATAAAGAAGGTATCCCACCTGACCAACAA 502499 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 ||| | ||||| || || |||||| |||| |||||||| ||| || | || || ||| | Sbjct 502498 AGATTGATCTTTGCAGGTAAGCAGCTGGAGGATGGAAGAACTCTGTCTGACTATAACATT 502439 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACT 206387 || |||||||| ||| | ||| | ||||||||||| Sbjct 502438 CAAAAAGAGTCAACTTTGCACTTGGTTTTGAGACT 502404 Score = 109 bits (120), Expect = 1e-18 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||||||| || || || || || || || || || | || || ||| |||||| Sbjct 502846 CAGATATTTGTTAAGACTCTTACTGGTAAGACTATTACACTTGAGGTTGAATCCTCTGAC 502787 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| |||||| ||||| || || |||||||| || || ||| ||| Sbjct 502786 ACTATCGACAACGTAAAGTCGAAGATCCAGGATAAAGAAGGTATCCCACCTGACCAACAA 502727 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 ||| | ||||| || || |||||| |||| |||||||| ||| | | || || ||| | Sbjct 502726 AGATTGATCTTTGCAGGTAAGCAGCTGGAGGATGGAAGAACTCTATCTGACTATAACATT 502667 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACT 206387 || |||||||| ||| | || || ||||||||||| Sbjct 502666 CAAAAAGAGTCAACTTTGCATCTGGTTTTGAGACT 502632 Score = 109 bits (120), Expect = 1e-18 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||||||| || || || || || || || || || | || || ||| |||||| Sbjct 503074 CAGATATTTGTTAAGACTCTTACTGGTAAGACTATTACACTTGAGGTTGAATCCTCTGAC 503015 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| |||||| ||||| || || |||||||| || || ||| ||| Sbjct 503014 ACTATCGACAACGTAAAGTCGAAGATCCAGGATAAAGAAGGTATCCCACCTGACCAACAA 502955 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 ||| | ||||| || || |||||| |||| |||||||| ||| | | || || ||| | Sbjct 502954 AGATTGATCTTTGCAGGTAAGCAGCTGGAGGATGGAAGAACTCTATCTGACTATAACATT 502895 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACT 206387 || |||||||| ||| | || || ||||||||||| Sbjct 502894 CAAAAAGAGTCAACTTTGCATCTGGTTTTGAGACT 502860 Score = 93.3 bits (102), Expect = 1e-13 Identities = 81/101 (80%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 204755 AGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTT 204814 ||||||||||| | ||| | ||| |||||||| || | |||||||||| || ||| ||| Sbjct 502404 AGTCTCAAAACCAAGTGCAAAGTTGACTCTTTTTGAATGTTATAGTCAGACAGAGTTCTT 502463 Query 204815 CCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855 ||||| ||||||||||| || || ||||| | | |||||| Sbjct 502464 CCATCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTGTTG 502504 Score = 87.8 bits (96), Expect = 4e-12 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 204755 AGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTT 204814 ||||||||||| || || | ||| |||||||| || | |||||||||| | ||| ||| Sbjct 502632 AGTCTCAAAACCAGATGCAAAGTTGACTCTTTTTGAATGTTATAGTCAGATAGAGTTCTT 502691 Query 204815 CCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855 ||||| ||||||||||| || || ||||| | | |||||| Sbjct 502692 CCATCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTGTTG 502732 Score = 87.8 bits (96), Expect = 4e-12 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 204755 AGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTT 204814 ||||||||||| || || | ||| |||||||| || | |||||||||| | ||| ||| Sbjct 502860 AGTCTCAAAACCAGATGCAAAGTTGACTCTTTTTGAATGTTATAGTCAGATAGAGTTCTT 502919 Query 204815 CCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855 ||||| ||||||||||| || || ||||| | | |||||| Sbjct 502920 CCATCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTGTTG 502960 Score = 87.8 bits (96), Expect = 4e-12 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 204755 AGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTT 204814 ||||||||||| || || | ||| |||||||| || | |||||||||| | ||| ||| Sbjct 503088 AGTCTCAAAACCAGATGCAAAGTTGACTCTTTTTGAATGTTATAGTCAGATAGAGTTCTT 503147 Query 204815 CCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855 ||||| ||||||||||| || || ||||| | | |||||| Sbjct 503148 CCATCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTGTTG 503188 >seq6 Length=1007293 Score = 98.7 bits (108), Expect = 2e-15 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 || || || || ||||||||||| || ||| || ||||| | || || ||| Sbjct 101211 ACTGGTAAGACCATCACTTTGGAGGTCGAATCCTCCGACACTATTGACAATGTCAAGTCT 101270 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||||||||| || || || ||| || ||| || ||| | || ||||| || ||| Sbjct 101271 AAGATTCAAGACAAGGAGGGTATTCCACCTGACCAGCAGAGATTGATTTTCGCTGGTAAG 101330 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 |||||||| ||||| || |||||| | || |||||| |||| || || || || | ||| Sbjct 101331 CAGTTGGAGGATGGCAGAACTTTGTCTGACTACAACATCCAAAAGGAATCCACCTTGCAC 101390 Query 206374 CTTGTTTTGAGA 206385 | || |||||| Sbjct 101391 TTGGTCTTGAGA 101402 >seq14 Length=1283838 Score = 89.7 bits (98), Expect = 1e-12 Identities = 79/99 (80%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 204757 TCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCC 204816 ||||||||| ||||| || ||||| ||||| || | || ||||||| | ||| ||||| Sbjct 778957 TCTCAAAACCAGGTGCAGGGTAGATTCTTTTTGAATGTTGTAGTCAGAAAGAGTTCTTCC 778898 Query 204817 ATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855 ||| ||||||||||| || |||||||| || | ||||| Sbjct 778897 ATCCTCCAGCTGCTTACCTGCGAAGATCAGTCTCTGTTG 778859 Score = 86.0 bits (94), Expect = 1e-11 Identities = 71/87 (82%), Gaps = 0/87 (0%) Strand=Plus/Minus Query 204757 TCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCC 204816 ||||||||| ||||| || ||||| ||||| || | |||||||||| | ||| ||||| Sbjct 779185 TCTCAAAACCAGGTGCAGGGTAGATTCTTTTTGAATGTTATAGTCAGAAAGAGTTCTTCC 779126 Query 204817 ATCTTCCAGCTGCTTTCCGGCGAAGAT 204843 ||| ||||||||||| || || ||||| Sbjct 779125 ATCCTCCAGCTGCTTACCAGCAAAGAT 779099 >seq13 Length=1315104 Score = 89.7 bits (98), Expect = 1e-12 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 || || || || ||||||||||| || ||| ||| ||||| | || || ||| Sbjct 1190052 ACTGGTAAGACCATCACTTTGGAGGTCGAATCTTCCGACACTATTGACAACGTCAAGTCT 1189993 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||||||||| || || || || || ||| || ||| | || ||||| || ||| Sbjct 1189992 AAGATTCAAGACAAGGAGGGTATCCCACCTGACCAGCAGAGATTGATTTTCGCTGGTAAG 1189933 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 || ||||| ||||| || |||||| | || || ||| |||| || || || || | ||| Sbjct 1189932 CAATTGGAGGATGGCAGAACTTTGTCTGACTATAACATCCAAAAGGAATCCACCTTGCAC 1189873 Query 206374 CTTGTTTTGAGA 206385 | || |||||| Sbjct 1189872 TTGGTCTTGAGA 1189861 >seq4 Length=1091360 Score = 87.8 bits (96), Expect = 4e-12 Identities = 140/201 (70%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || | || || || || || || | ||||| || ||||||| Sbjct 719941 CAGATTTTCGTCAAGACCTTGACGGGTAAGACTATTACCCTCGAAGTCGAGTCTTCTGAC 719882 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| ||||||||||| || ||||| || || ||| || Sbjct 719881 ACTATCGACAATGTTAAGTCCAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAGCAG 719822 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 ||| | |||||||| || ||||| ||||| ||||| || || ||| | || || ||| || Sbjct 719821 AGATTGATCTTCGCTGGTAAGCAATTGGAGGATGGCAGAACGTTGTCTGACTATAACATC 719762 Query 206353 CAGAAAGAGTCTACTCTTCAC 206373 ||||| || || ||| | ||| Sbjct 719761 CAGAAGGAATCCACTTTGCAC 719741 >seq10 Length=1751495 Score = 84.2 bits (92), Expect = 5e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || | || || || || || || | ||||| || ||||||| Sbjct 575413 CAGATTTTCGTCAAGACCTTGACGGGTAAGACTATTACCCTTGAAGTCGAGTCTTCTGAC 575354 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| |||||||||||| || ||||| ||| || || || Sbjct 575353 ACTATCGACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATTCCACCTGATCAGCAG 575294 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 ||| | ||||| || || ||||| ||||| ||||| || || ||| | || || ||| | Sbjct 575293 AGATTGATCTTTGCTGGTAAGCAATTGGAGGATGGCAGAACCTTGTCTGACTATAACATT 575234 Query 206353 CAGAAAGAGTCTAC 206366 ||||| || ||||| Sbjct 575233 CAGAAGGAATCTAC 575220 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181820527442578