Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20parabailii_20[genbank_20GCA_5F001984395.2_202017 -03-16] 18 sequences; 20,864,403 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq12 118 2e-20 seq9 91.5 2e-12 >seq12 Length=1443312 Score = 118 bits (130), Expect = 2e-20 Identities = 246/354 (69%), Gaps = 12/354 (3%) Strand=Plus/Minus Query 1455963 AGAGGTCCAATTGCCAGAGGCACGTTTGTTT-TACGGGTTCCAGATCGCCATCGAAAACA 1456021 |||||| || | |||||||| | ||||| ||||||||||||||| || ||||| | Sbjct 768046 AGAGGTTCAGATACCAGAGGC-CAAATGTTTCTACGGGTTCCAGATCATGATGGAAAATA 767988 Query 1456022 TCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCGGTCGAGAAGG 1456081 |||| || || || ||||| | | ||||| || ||| ||||||| || || || Sbjct 767987 TCCATTCGGAGACTTACTCATTATTAATCGAGACATACATCAAGGATCCTAAGGAACGGG 767928 Query 1456082 ACCACCTCTTTCGCGCCATCGA-CACGGTGCCGTCGGTGAGGAAAAAGGCCGACTGGGCG 1456140 | | | ||| || || || ||| | || | | | | ||||||| || ||||| Sbjct 767927 ATTTCTTGTTTAATGCGATTGAGCACA-TCCCTCAGATCAAGGAAAAGGCTGAGTGGGCT 767869 Query 1456141 ATGAAGTGGATCAACAAGGAGGGCCTCGACACTTT--GCCGAGCGGCTCGTCGGCTTTGC 1456198 || | |||||| |||| | | | | | |||| || ||| |||| || | ||||| Sbjct 767868 ATCAGGTGGATT--CAAG-ATGACAATG-CTCTTTACGCTGAGAGGCTGGTGGCATTTGC 767813 Query 1456199 CGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCTCAAGAAGCG 1456257 ||| || || || |||||||||||||| ||| |||||||||||||||||| ||| Sbjct 767812 CGCAGTAGAAGGTATCTTTTTCTCGGGATCTTTTGCCGCCATCTTTTGGCTCAAAAAGAA 767753 Query 1456258 CGGCCTCATGCCCGGTCTTCTGCTTTAGCAACGAATTTATCAGTCGCGACGAAG 1456311 ||||||||||| || | | |||| ||||| || ||| || | || |||| Sbjct 767752 GGGCCTCATGCCAGG-CCTGACCTTTTCAAACGAGTTAATCTGTAGAGATGAAG 767700 >seq9 Length=2005801 Score = 91.5 bits (100), Expect = 2e-12 Identities = 177/261 (68%), Gaps = 8/261 (3%) Strand=Plus/Minus Query 259925 CCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTTGGAC 259984 || ||||| || ||||| || || || | || |||| | || ||||| ||| | | | Sbjct 290315 CCTACGCTATTCAATGCAGGAACCCCACATCCTCAGATGGCTTCTTGCTTCCTGGTAGCC 290256 Query 259985 ATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCATCTCC 260044 ||||| | || || |||||||| ||||||||||| || || | || || | |||||| Sbjct 290255 ATGAAAGATGACTCTATCGAGGGTATCTATGACACTCTAAAAGAATGTGCTATGATCTCC 290196 Query 260045 AAGGCGGCCGGCGGCATCGGTTTTGCCGCA----CACAAGGTGCGCGCCGCGGGCGCCTA 260100 ||| | || || || || ||||| ||| ||||| | || | | || | || Sbjct 290195 AAGACTGCTGGTGGTATTGGTTT----GCATATCCACAATATCCGTTCAACTGGTTCGTA 290140 Query 260101 CGTGGCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGA 260160 | || || |||||||| || || || || | |||||| |||| |||||||| | Sbjct 290139 TATTGCTGGTACCAACGGTACATCTAATGGACTAATCCCCATGATTCGTGTTTTTAATAA 290080 Query 260161 CACGGCGCGCTACGTCGACCA 260181 || || || || || ||||| Sbjct 290079 TACTGCTCGGTATGTGGACCA 290059 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177809463866916