Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20parabailii_20[genbank_20GCA_5F001984395.2_202017 -03-16] 18 sequences; 20,864,403 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq9 178 2e-39 seq14 172 6e-38 seq1 87.8 2e-12 seq12 86.0 7e-12 >seq9 Length=2005801 Score = 178 bits (196), Expect = 2e-39 Identities = 542/831 (65%), Gaps = 9/831 (1%) Strand=Plus/Minus Query 104252 GGTATTCATGGGGAAGACATTGATTCTGTCTTGGAGACATACGACAAGATGTCCC-AAGG 104310 || |||||||| || || ||| | | | | ||||| ||| || ||||| | |||| Sbjct 290393 GGCATTCATGGTGATGATATTAAGGCAGCTATTGAGACTTACAACCTAATGTCTCTAAGG 290334 Query 104311 TATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGGTACACCAAGACCCCAAATGTC 104370 ||| ||||| ||||| | || || || |||||||| || || ||| || || ||| | Sbjct 290333 TAT-TTCATCCACGCTTCCCCTACGCTATTCAATGCAGGAACCCCACATCCTCAGATGGC 290275 Query 104371 CAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTAC 104430 ||||||||| | |||| || || ||||| ||| | |||||||||| ||||| | Sbjct 290274 TTCTTGCTTCCTGGTAGCCATGAAAGATGACTCTATCGAGGGTATCTATGACACTCTAAA 290215 Query 104431 GGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAG 104490 || ||||| ||||| ||| ||||| |||||||| |||| ||||| || | | Sbjct 290214 AGAATGTGCTATGATCTCCAAGACTGCTGGTGGTATTGGTTTGCATATCCACAATATCCG 290155 Query 104491 AGCCAATAAATCTCGTATTCGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCT 104550 | | | || |||| || || || ||| ||| |||| | || || ||| | Sbjct 290154 TTCAACTGGTTCGTATATTGCTGGTACCAACGGTACATCTAATGGACTAATCCCCATGAT 290095 Query 104551 TCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAGCTGGGCGTCGAAAG----GGAT 104606 ||| || ||||| || || || ||||| | |||| ||| | |||| || Sbjct 290094 TCGTGTTTTTAATAATACTGCTCGGTATGTGGACCAAGGTGGTAATA-AAAGACCTGGCG 290036 Query 104607 CTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTC 104666 || | || | ||| | ||||| |||||||| ||||| | || || | || | | Sbjct 290035 CTTTTGCCCTATATTTGGAGCCCTGGCACGCTGATATTTTTGATTTTATCGACATTAGGA 289976 Query 104667 TCAACCAAGGTGACGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAG 104726 || || ||| | |||||| || | | ||| | || | || | |||||| | | Sbjct 289975 AAAATCACGGTAAGGAGGAGATTCGCGCCAGAGATTTGTTTCCAGCGTTATGGATTTCCG 289916 Query 104727 ATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGG 104786 | | || |||||| | || || ||| || | ||| | || || | || | | | Sbjct 289915 ACTTATTTATGAAGCGTGTAGAACAGAACGGAGAATGGACCCTTTTCTCCCCTAGCGAAG 289856 Query 104787 CACCTGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGG 104846 | || ||| | || |||| || | ||||||||||| || || || || ||| Sbjct 289855 CGCCAGGTTTATCTGATGTTTACGGGAAAGAGTTTGAAGCGCTATATGAAAGATATGAGC 289796 Query 104847 AAGAAGGTCGGGCGACTGCGACGGTGCCAGCTGCCGATGT-GTGGAAAGCTATTCTCAAG 104905 ||||||| || | | ||| | ||| | || || |||| | || || ||| | Sbjct 289795 AAGAAGGGCGTGGTAGAAAGACAATAAGGGCT-CAGAAGTTGTGGTACGCCATCCTCGAA 289737 Query 104906 TCTCAAACCGAGACTGGTACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGT 104965 |||| || || ||||||||||| | ||| | ||||| || || || || | |||||| Sbjct 289736 GCTCAGACAGAAACTGGTACACCTTTTATGTTATACAAGGATGCTTGCAATGAGAAGAGT 289677 Query 104966 AATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTT 105025 || |||||||| |||||||||| || |||||||| ||| ||||| | |||| Sbjct 289676 AACCAAAAGAACCTGGGTGTGATTAAATCATCCAATCTTTGTTGTGAAATTGTTGAATAC 289617 Query 105026 ACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCC 105076 | || || ||||| | || || || || || || || || || || ||| Sbjct 289616 TCCGATAAGGATGAATCTGCAGTTTGCAATCTGGCTTCTATTGCGCTTCCC 289566 >seq14 Length=1283838 Score = 172 bits (190), Expect = 6e-38 Identities = 541/831 (65%), Gaps = 9/831 (1%) Strand=Plus/Plus Query 104252 GGTATTCATGGGGAAGACATTGATTCTGTCTTGGAGACATACGACAAGATGTCCC-AAGG 104310 || ||||| || || || ||| | | | | | ||||| ||| || ||||| |||| Sbjct 990583 GGCATTCACGGTGATGATATTAAGGCAGCCATTGAGACTTACAACCTCATGTCTTTAAGG 990642 Query 104311 TATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGGTACACCAAGACCCCAAATGTC 104370 ||| |||||||| || | || || || |||||||| || || ||| || || ||| | Sbjct 990643 TAT-TTCATTCATGCTTCCCCTACGCTATTCAATGCAGGAACTCCACATCCTCAGATGGC 990701 Query 104371 CAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTAC 104430 ||| ||||| | |||| || || || || ||| | |||||||||| ||||| | Sbjct 990702 TTCTTGTTTCCTGGTAGCCATGAAAGATGATTCTATCGAGGGTATCTATGACACTCTCAA 990761 Query 104431 GGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAG 104490 || ||||| || || ||| ||||| |||||||| |||| ||||| || | | Sbjct 990762 AGAATGTGCTATGATTTCCAAGACTGCTGGTGGTATTGGTTTGCATATCCACAATATCCG 990821 Query 104491 AGCCAATAAATCTCGTATTCGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCT 104550 ||| | || |||| || || |||||| ||| |||| | || || ||| | Sbjct 990822 CTCCACTGGTTCGTATATTGCTGGTACCAATGGTACATCTAATGGGTTAATCCCTATGAT 990881 Query 104551 TCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAGCTGGGCGTCGAAAG----GGAT 104606 ||| || ||||| || || | ||||| | |||| ||| | |||| || Sbjct 990882 TCGTGTCTTTAATAATACCGCTAGGTATGTGGACCAAGGTGGTAATA-AAAGACCAGGCG 990940 Query 104607 CTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTC 104666 || | || | ||| | ||||| |||||||| ||||| | || ||| | || | | Sbjct 990941 CTTTTGCCCTATATTTGGAGCCTTGGCACGCAGATATTTTCGACTTCATCGACATTAGGA 991000 Query 104667 TCAACCAAGGTGACGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAG 104726 || || ||| | |||||| || | | ||| | || | || | |||||| | | Sbjct 991001 AGAATCACGGTAAGGAGGAGATTCGCGCCAGAGATTTGTTTCCAGCATTATGGATTTCCG 991060 Query 104727 ATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGG 104786 | | || ||||| | || || ||| || | ||| |||| || | || | | | Sbjct 991061 ACTTATTTATGAAACGTGTAGAACAGAACGGAGAATGGACTCTTTTCTCCCCTAGCGAAG 991120 Query 104787 CACCTGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGG 104846 | || ||| | || || | || | ||||||||||| || || || ||| Sbjct 991121 CGCCAGGTTTATCTGACGTTTACGGGAAAGAGTTTGAAGCGCTATATGAGCGATATGAGC 991180 Query 104847 AAGAAGGTCGGGCGACTGCGACGGTGCCAGCTGCCGATGT-GTGGAAAGCTATTCTCAAG 104905 ||||| |||| | ||| | ||| | || || |||| | || || ||| | Sbjct 991181 GGGAAGGGCGGGGTAGAAAGACAATCAGGGCT-CAGAAGTTGTGGTACGCCATCCTCGAA 991239 Query 104906 TCTCAAACCGAGACTGGTACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGT 104965 |||| || || ||||||||||| | ||| | |||||||| || || ||| | |||||| Sbjct 991240 GCTCAGACAGAAACTGGTACACCTTTTATGTTGTACAAAGATGCTTGCAACGAGAAGAGT 991299 Query 104966 AATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTT 105025 || |||||||| ||||||||||||| |||||||| ||| ||||| | |||| Sbjct 991300 AACCAAAAGAACCTGGGTGTGATCAAATCATCCAATCTTTGTTGTGAAATTGTTGAATAC 991359 Query 105026 ACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCC 105076 | || || ||||| | || || ||||| || || || || ||||| ||| Sbjct 991360 TCCGATAAGGATGAATCTGCAGTTTGTAATCTGGCTTCTATTGCTCTTCCC 991410 >seq1 Length=2110500 Score = 87.8 bits (96), Expect = 2e-12 Identities = 289/439 (66%), Gaps = 18/439 (4%) Strand=Plus/Minus Query 94526 TCCTGGCATTCTTTGCTGGATCCGATGGAATTGTTTTTGAGAATATCAATAACAACTTTG 94585 |||| || |||||||| | ||| || |||||||| |||||| | | | || ||| Sbjct 1034515 TCCTAGCTTTCTTTGCCGCATCTGACGGAATTGTCAATGAGAACTTAGTTGAGAATTTTT 1034456 Query 94586 CTGATGAGGTGCAATCCTCTGAAGCGAGATCCTTCTATGCGTATCAGTGTCATAATG-AA 94644 | | ||||| ||| | || || | || ||||| | || |||| |||| ||| || Sbjct 1034455 CCGCAGAGGTTCAAATACCAGAGGCCAAATGTTTCTACGGGTTTCAGA-TCATGATGGAA 1034397 Query 94645 ATGGTGCATGGGGAGACATACAGTAAACTCATAGACAAGTATATTAAGGATGGTGCTGAG 94704 | | ||| |||||| ||| ||| || || | || || |||||| || || Sbjct 1034396 AATATCCATTCGGAGACTTACTCATTACTTATCGAGACATACATCAAGGATC---CTAAG 1034340 Query 94705 AAGAAGCAGCTCTT---TGAAGCCATCCAAACAGTTCCGTGTATTCAAAAGAAAG-CGGA 94760 | | | |||| | | ||||| || || ||| | |||| |||| | || Sbjct 1034339 GAACGGGATTTCTTGTTTAATGCCATTGAA-CACATCCCTCAGATCAAGGAAAAGGCTGA 1034281 Query 94761 TTGGGCTATGAAGTGGTTT---GAT-ACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCG 94816 ||||| || | |||| || ||| |||| | | | || | |||||| | | | | Sbjct 1034280 GTGGGCCATCAGGTGGATTCAAGATGACAATG-CTCTTTAC---GCTGAGAGGTTGGTGG 1034225 Query 94817 CATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCA 94876 ||||||| || || |||||||| ||||| || || || ||| || | |||||||| Sbjct 1034224 CATTTGCCGCAGTAGAAGGTATCTTTTTCTCGGGGTCGTTTGCCGCAATCTTTTGGCTCA 1034165 Query 94877 AGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGG 94936 | ||| |||||||||||| || || ||| || |||||| | |||| | | || |||| Sbjct 1034164 AAAAGAAAGGTCTCATGCCTGGCCTGACCTTTTCAAACGAGTTGATCTGTAGAGATGAGG 1034105 Query 94937 GACTCCACCAAGAGTTTGC 94955 || | ||| ||| ||||| Sbjct 1034104 GATTGCACACAGACTTTGC 1034086 >seq12 Length=1443312 Score = 86.0 bits (94), Expect = 7e-12 Identities = 95/127 (75%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 154116 TTGCGCCACGATCTGGTCTCGCTGTGAAACATGGTATCCAAGTTGGTGCGGGTGTTGTTG 154175 |||| || || || || || || || || ||||| |||||| ||||| ||||| || | Sbjct 1215232 TTGCCCCTCGTTCAGGACTTGCCGTCAAGCATGGGATCCAAACGGGTGCCGGTGTGGTCG 1215291 Query 154176 ATCCCGACTACACGGGTGAAGTCAAAGTCGTTCTTTTCAATCACGGAGACAAAGACTTTG 154235 || |||||||||||||| || ||||| ||||| ||||||||| ||| ||||| Sbjct 1215292 ATAGGGACTACACGGGTGAGGTTAAAGTGGTTCTCTTCAATCACTCCGACCGCGACTTCC 1215351 Query 154236 AGGTAAA 154242 |||| || Sbjct 1215352 AGGTGAA 1215358 Score = 84.2 bits (92), Expect = 3e-11 Identities = 145/207 (70%), Gaps = 8/207 (4%) Strand=Plus/Minus Query 94753 AAAGCGGATTGGGCTATGAAGTGGTTT---GAT-ACAAAGTCGCGTTCCTTTGCTGAGCG 94808 || || || |||||||| | |||| || ||| |||| | | | || | |||||| | Sbjct 767883 AAGGCTGAGTGGGCTATCAGGTGGATTCAAGATGACAATG-CTCTTTAC---GCTGAGAG 767828 Query 94809 ACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTA 94868 || | |||||||| || || |||||||| ||||| || || || ||| || | Sbjct 767827 GCTGGTGGCATTTGCCGCAGTAGAAGGTATCTTTTTCTCGGGATCTTTTGCCGCCATCTT 767768 Query 94869 TTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCG 94928 ||||||||| ||| || ||||||||||| || ||| || |||||| | |||| | | Sbjct 767767 TTGGCTCAAAAAGAAGGGCCTCATGCCAGGCCTGACCTTTTCAAACGAGTTAATCTGTAG 767708 Query 94929 TGACGAGGGACTCCACCAAGAGTTTGC 94955 || || ||| | ||| ||| ||||| Sbjct 767707 AGATGAAGGATTGCACACAGACTTTGC 767681 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583260668766320