Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20parabailii_20[genbank_20GCA_5F001984395.2_202017 -03-16] 18 sequences; 20,864,403 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq9 143 2e-29 seq10 125 6e-24 seq13 111 1e-19 seq6 111 1e-19 seq14 109 5e-19 seq4 102 7e-17 >seq9 Length=2005801 Score = 143 bits (158), Expect = 2e-29 Identities = 154/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||||||||| || ||||| ||||| ||| ||||||| || ||||| ||| | || Sbjct 502393 ATGCAGATATTTGTTAAGACTCTTACCGGTAAGACTATTACACTCGAAGTTGAATCCTCT 502334 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | |||||| || ||||| ||||| || ||||| || ||||| ||| Sbjct 502333 GATACCATTGACAATGTCAAATCCAAGATTCAGGACAAGGAGGGCATTCCGCCCGACCAA 502274 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | || || | || || || ||| |||| || | || |||| || |||||| Sbjct 502273 CAGAGATTGATCTTTGCAGGTAAGCAACTGGAGGATGGAAGAACTCTTTCTGACTACAAC 502214 Query 27168 ATTCAAAAGGAGTCGACCTTACAT 27191 |||||||| ||||||||| ||||| Sbjct 502213 ATTCAAAAAGAGTCGACCCTACAT 502190 Score = 116 bits (128), Expect = 3e-21 Identities = 176/249 (71%), Gaps = 1/249 (0%) Strand=Plus/Minus Query 26969 ATTTTTTAATTTATACGCCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTAC 27028 ||||| ||| ||| || |||||||| ||||| || ||||| || || ||| ||||||| Sbjct 503551 ATTTTATAACCGATAGGC-ATGCAGATTTTTGTTAAGACTCTTACTGGTAAGACTATTAC 503493 Query 27029 TCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGA 27088 ||||| || ||| | || ||| | || || | || || || || || || ||||| Sbjct 503492 ACTTGAGGTCGAATCCTCTGACACTATCGACAACGTAAAGTCGAAGATCCAGGATAAAGA 503433 Query 27089 AGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTC 27148 |||||| ||||| ||||| || | || || | ||| || || || ||||| || | Sbjct 503432 AGGCATCCCACCTGATCAGCAAAGATTGATCTTCGCAGGTAAGCAGTTGGAGGATGGCAG 503373 Query 27149 GACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCG 27208 || | || |||||||| || |||||||| || || |||| | |||||| | || | Sbjct 503372 AACTTTATCTGATTACAATATCCAAAAGGAATCAACTCTACACCTCGTTTTGAGATTAAG 503313 Query 27209 GGGTGGCAT 27217 ||||| || Sbjct 503312 AGGTGGTAT 503304 Score = 109 bits (120), Expect = 5e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||||||||| || ||||| || || ||| ||||||| ||||| || ||| | || Sbjct 502621 ATGCAGATATTTGTTAAGACTCTTACTGGTAAGACTATTACACTTGAGGTTGAATCCTCT 502562 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || || || || || || |||||||| || ||||| || ||| Sbjct 502561 GACACTATCGACAACGTAAAGTCGAAGATCCAGGATAAAGAAGGTATCCCACCTGACCAA 502502 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | || || | || || || || |||| || | || | || || || ||| Sbjct 502501 CAAAGATTGATCTTTGCAGGTAAGCAGCTGGAGGATGGAAGAACTCTGTCTGACTATAAC 502442 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTG 27200 |||||||| ||||| || || || ||||||||| Sbjct 502441 ATTCAAAAAGAGTCAACTTTGCACTTGGTTTTG 502409 Score = 109 bits (120), Expect = 5e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||||||||| || ||||| || || ||| ||||||| ||||| || ||| | || Sbjct 502849 ATGCAGATATTTGTTAAGACTCTTACTGGTAAGACTATTACACTTGAGGTTGAATCCTCT 502790 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || || || || || || |||||||| || ||||| || ||| Sbjct 502789 GACACTATCGACAACGTAAAGTCGAAGATCCAGGATAAAGAAGGTATCCCACCTGACCAA 502730 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | || || | || || || || |||| || | || | || || || ||| Sbjct 502729 CAAAGATTGATCTTTGCAGGTAAGCAGCTGGAGGATGGAAGAACTCTATCTGACTATAAC 502670 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTG 27200 |||||||| ||||| || || ||| |||||||| Sbjct 502669 ATTCAAAAAGAGTCAACTTTGCATCTGGTTTTG 502637 Score = 109 bits (120), Expect = 5e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||||||||| || ||||| || || ||| ||||||| ||||| || ||| | || Sbjct 503077 ATGCAGATATTTGTTAAGACTCTTACTGGTAAGACTATTACACTTGAGGTTGAATCCTCT 503018 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || || || || || || |||||||| || ||||| || ||| Sbjct 503017 GACACTATCGACAACGTAAAGTCGAAGATCCAGGATAAAGAAGGTATCCCACCTGACCAA 502958 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | || || | || || || || |||| || | || | || || || ||| Sbjct 502957 CAAAGATTGATCTTTGCAGGTAAGCAGCTGGAGGATGGAAGAACTCTATCTGACTATAAC 502898 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTG 27200 |||||||| ||||| || || ||| |||||||| Sbjct 502897 ATTCAAAAAGAGTCAACTTTGCATCTGGTTTTG 502865 Score = 105 bits (116), Expect = 6e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| ||||| ||||||| ||| ||||||| | || ||||| | || Sbjct 503305 ATGCAGATTTTTGTTAAAACATTGACCGGTAAGACTATTACATTAGAGGTGGAGTCTTCT 503246 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || || || || ||||| |||||||| || ||||| || ||| Sbjct 503245 GACACTATCGACAACGTAAAGTCGAAGATCCAAGATAAAGAAGGTATCCCACCTGACCAA 503186 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | || || | || || || || |||| || | || | || || || ||| Sbjct 503185 CAAAGATTGATCTTTGCAGGTAAGCAGCTGGAGGATGGAAGAACTCTATCTGACTATAAC 503126 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTG 27200 |||||||| ||||| || || ||| |||||||| Sbjct 503125 ATTCAAAAAGAGTCAACTTTGCATCTGGTTTTG 503093 >seq10 Length=1751495 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || |||| || ||| ||||||| |||||||| || | || Sbjct 575416 ATGCAGATTTTCGTCAAGACCTTGACGGGTAAGACTATTACCCTTGAAGTCGAGTCTTCT 575357 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| ||| ||||||||||| ||||| || ||||| ||||| Sbjct 575356 GACACTATCGACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATTCCACCTGATCAG 575297 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | || || | || || || |||||||| || | ||| | || || || ||| Sbjct 575296 CAGAGATTGATCTTTGCTGGTAAGCAATTGGAGGATGGCAGAACCTTGTCTGACTATAAC 575237 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 ||||| ||||| || ||||| || ||||| | | ||| | ||||| Sbjct 575236 ATTCAGAAGGAATCTACCTTGCACTTGGTGCTTAGATTGAGAGGTGG 575190 >seq13 Length=1315104 Score = 111 bits (122), Expect = 1e-19 Identities = 157/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 26997 TTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATT 27056 || || || ||| |||| || ||| | || ||| | || || ||| | |||||| | ||| Sbjct 1190067 TTCGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAGGTCGAATCTTCCGACACTATT 1190008 Query 27057 GAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTA 27116 || | ||||| || ||||||||||| || || || ||||| || || ||| | || Sbjct 1190007 GACAACGTCAAGTCTAAGATTCAAGACAAGGAGGGTATCCCACCTGACCAGCAGAGATTG 1189948 Query 27117 ATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAG 27176 || | ||| || || |||||||| || | || | || || || ||||| |||||| Sbjct 1189947 ATTTTCGCTGGTAAGCAATTGGAGGATGGCAGAACTTTGTCTGACTATAACATCCAAAAG 1189888 Query 27177 GAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || ||||| || ||||| ||| | ||| | ||||| || Sbjct 1189887 GAATCCACCTTGCACTTGGTCTTGAGATTGAGAGGTGGTAT 1189847 >seq6 Length=1007293 Score = 111 bits (122), Expect = 1e-19 Identities = 157/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 26997 TTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATT 27056 || || || ||| |||| || ||| | || ||| | || || ||| | |||||| | ||| Sbjct 101196 TTCGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAGGTCGAATCCTCCGACACTATT 101255 Query 27057 GAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTA 27116 || | ||||| || ||||||||||| || || || ||||| || || ||| | || Sbjct 101256 GACAATGTCAAGTCTAAGATTCAAGACAAGGAGGGTATTCCACCTGACCAGCAGAGATTG 101315 Query 27117 ATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAG 27176 || | ||| || || || ||||| || | || | || || |||||||| |||||| Sbjct 101316 ATTTTCGCTGGTAAGCAGTTGGAGGATGGCAGAACTTTGTCTGACTACAACATCCAAAAG 101375 Query 27177 GAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || ||||| || ||||| ||| | ||| | ||||| || Sbjct 101376 GAATCCACCTTGCACTTGGTCTTGAGATTGAGAGGTGGTAT 101416 >seq14 Length=1283838 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || ||||| || || ||| |||| || ||||| || ||| | || Sbjct 778970 ATGCAGATTTTTGTTAAGACTCTTACTGGTAAGACTATAACACTTGAGGTTGAATCCTCT 779029 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || || || ||||| ||||| || ||||| || ||||| ||| Sbjct 779030 GACACAATCGACAACGTGAAGTCGAAGATTCAGGACAAGGAGGGCATTCCGCCCGACCAA 779089 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | || || | || || || || |||| || | || |||| || || ||| Sbjct 779090 CAGAGATTGATCTTTGCTGGTAAGCAGCTGGAGGATGGAAGAACTCTTTCTGACTATAAC 779149 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||||||| || || ||| | || |||||||| | || | ||||| || Sbjct 779150 ATTCAAAAAGAATCTACCCTGCACCTGGTTTTGAGATTAAGAGGTGGTAT 779199 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || || || || || ||| ||||||| || || || || | || Sbjct 778742 ATGCAGATTTTTGTCAAGACCCTTACTGGTAAGACTATTACGCTGGAGGTAGAGTCTTCT 778801 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || || || || || || |||||||| || ||||| || ||| Sbjct 778802 GACACTATCGACAATGTAAAGTCGAAGATCCAGGATAAAGAAGGTATTCCACCTGACCAA 778861 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | ||| || || || |||| || | || |||| || |||||| Sbjct 778862 CAGAGACTGATCTTCGCAGGTAAGCAGCTGGAGGATGGAAGAACTCTTTCTGACTACAAC 778921 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||||||| || || ||| | || |||||||| | || | ||||| || Sbjct 778922 ATTCAAAAAGAATCTACCCTGCACCTGGTTTTGAGATTAAGAGGTGGTAT 778971 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || || || || || ||| ||||||| || || || || | || Sbjct 779198 ATGCAGATTTTTGTCAAGACCCTTACTGGTAAGACTATTACGCTGGAGGTAGAGTCTTCT 779257 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || || || || || || |||||||| || ||||| || ||| Sbjct 779258 GACACTATCGACAATGTAAAGTCGAAGATCCAGGATAAAGAAGGTATCCCACCTGACCAA 779317 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | ||| || || || |||| || | || |||| || |||||| Sbjct 779318 CAGAGACTGATCTTCGCAGGTAAGCAGCTGGAGGATGGAAGAACTCTTTCTGACTACAAC 779377 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 |||||||||||||| ||| | ||| | || | | ||| | ||||| Sbjct 779378 ATTCAAAAGGAGTCAACCCTGCATCTTGTCCTAAGATTGAGAGGTGG 779424 >seq4 Length=1091360 Score = 102 bits (112), Expect = 7e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || |||| || ||| ||||||| || ||||| || | || Sbjct 719944 ATGCAGATTTTCGTCAAGACCTTGACGGGTAAGACTATTACCCTCGAAGTCGAGTCTTCT 719885 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || || || ||||||||||| ||||| || ||||| || || Sbjct 719884 GACACTATCGACAATGTTAAGTCCAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAG 719825 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTT-TCCGATTACAA 27166 ||| | || || | ||| || || |||||||| || | || |||| || || || || Sbjct 719824 CAGAGATTGATCTTCGCTGGTAAGCAATTGGAGGA-TGGCAGAACGTTGTCTGACTATAA 719766 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 ||| || ||||| || || || || ||||| | | ||| | ||||| Sbjct 719765 CATCCAGAAGGAATCCACTTTGCACTTGGTGCTTAGATTGAGAGGTGG 719718 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434918302143360