Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20parabailii_20[genbank_20GCA_5F001984395.2_202017 -03-16] 18 sequences; 20,864,403 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq14 104 2e-17 seq9 82.4 5e-11 >seq14 Length=1283838 Score = 104 bits (114), Expect = 2e-17 Identities = 153/215 (71%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 ||||| |||||||| || ||||||||||| || ||||||| |||| || ||| | | Sbjct 778514 ATGCAGATTTTTGTTAAGACTCTTACTGGTAAGACTATTACACTTGAGGTTGAATCCTCT 778573 Query 27850 GACGATGT--ACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 ||| | | |||| || || || || || ||||||||| | || || | Sbjct 778574 GACACTATCGACAAC--GTGAAGTCGAAGATCCAAGATAAAGAAGGTATCCCACCTGATC 778631 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 ||||| ||||||| ||||| |||||||| || || || | | | ||||| ||||||| Sbjct 778632 AGCAAAGGTTAATCTTTGCAGGAAAACAGTTAGAGGATGGCAGAACTTTGTCTGATTACA 778691 Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002 | ||||||||||| || ||||| |||||||| Sbjct 778692 ATATCCAAAAAGAATCAACCCTGCATCTGGTTTTG 778726 >seq9 Length=2005801 Score = 82.4 bits (90), Expect = 5e-11 Identities = 151/219 (69%), Gaps = 12/219 (5%) Strand=Plus/Minus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 ||||| || ||||| || ||||||||||| || ||||||| |||| || ||| | | Sbjct 502621 ATGCAGATATTTGTTAAGACTCTTACTGGTAAGACTATTACACTTGAGGTTGAATCCTCT 502562 Query 27850 GACGATGTACAATCGGTCAAACAAAA----AATAGCC--GACAAAGAAGGTGTTCCGATG 27903 ||| || ||| | ||| ||| || | || || ||||||||| | || Sbjct 502561 GAC-----ACTATC-GACAACGTAAAGTCGAAGATCCAGGATAAAGAAGGTATCCCACCT 502508 Query 27904 GAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGAT 27963 || || ||| | || || ||||| || || || |||| || | | | | |||| || Sbjct 502507 GACCAACAAAGATTGATCTTTGCAGGTAAGCAGCTGGAGGATGGAAGAACTCTGTCTGAC 502448 Query 27964 TACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002 || ||||| ||||||||| |||||||| ||||||||| Sbjct 502447 TATAACATTCAAAAAGAGTCAACTTTGCACTTGGTTTTG 502409 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355862321932686