Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20parabailii_20[genbank_20GCA_5F001984395.2_202017 -03-16] 18 sequences; 20,864,403 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq9 181 2e-40 seq14 179 9e-40 seq4 125 2e-23 seq6 116 9e-21 seq13 113 1e-19 seq10 111 4e-19 >seq9 Length=2005801 Score = 181 bits (200), Expect = 2e-40 Identities = 171/218 (78%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT 210956 ||||| | || | ||| | ||| ||||||||||| |||||||| || | || || ||| Sbjct 502404 AGTCTCAAAACCAAGTGCAAAGTTGACTCTTTTTGAATGTTATAGTCAGACAGAGTTCTT 502463 Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016 ||||| ||||||||||| ||||| ||||| | | |||||||||||| || | ||||| Sbjct 502464 CCATCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCT 502523 Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076 || ||||||||||| || ||||| ||||| ||||||||| ||||||||| || || Sbjct 502524 TTATCCTGGATCTTCGACTTTACGTTGTCGATAGTGTCAGAGGATTCAACCTCAAGTGTA 502583 Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||| || || |||||||| ||||| | |||||| Sbjct 502584 ATAGTCTTACCAGTAAGAGTCTTAACAAATATCTGCAT 502621 Score = 181 bits (200), Expect = 2e-40 Identities = 171/218 (78%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT 210956 ||||| | || || || | ||| ||||||||||| |||||||| || | || || ||| Sbjct 502632 AGTCTCAAAACCAGATGCAAAGTTGACTCTTTTTGAATGTTATAGTCAGATAGAGTTCTT 502691 Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016 ||||| ||||||||||| ||||| ||||| | | |||||||||||| || | ||||| Sbjct 502692 CCATCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCT 502751 Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076 || ||||||||||| || ||||| ||||| ||||||||| ||||||||| || || Sbjct 502752 TTATCCTGGATCTTCGACTTTACGTTGTCGATAGTGTCAGAGGATTCAACCTCAAGTGTA 502811 Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||| || || |||||||| ||||| | |||||| Sbjct 502812 ATAGTCTTACCAGTAAGAGTCTTAACAAATATCTGCAT 502849 Score = 181 bits (200), Expect = 2e-40 Identities = 171/218 (78%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT 210956 ||||| | || || || | ||| ||||||||||| |||||||| || | || || ||| Sbjct 502860 AGTCTCAAAACCAGATGCAAAGTTGACTCTTTTTGAATGTTATAGTCAGATAGAGTTCTT 502919 Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016 ||||| ||||||||||| ||||| ||||| | | |||||||||||| || | ||||| Sbjct 502920 CCATCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCT 502979 Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076 || ||||||||||| || ||||| ||||| ||||||||| ||||||||| || || Sbjct 502980 TTATCCTGGATCTTCGACTTTACGTTGTCGATAGTGTCAGAGGATTCAACCTCAAGTGTA 503039 Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||| || || |||||||| ||||| | |||||| Sbjct 503040 ATAGTCTTACCAGTAAGAGTCTTAACAAATATCTGCAT 503077 Score = 178 bits (196), Expect = 3e-39 Identities = 169/216 (78%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 |||||| ||||| || || || ||||||||||| ||||| || || | ||| || ||||| Sbjct 502178 TCTTAGCACAAGATGTAGGGTCGACTCTTTTTGAATGTTGTAGTCAGAAAGAGTTCTTCC 502237 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 ||| ||||| ||||| ||||| ||||| | | |||||||| || |||| || ||||| Sbjct 502238 ATCCTCCAGTTGCTTACCTGCAAAGATCAATCTCTGTTGGTCGGGCGGAATGCCCTCCTT 502297 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 |||||| ||||| ||| || || || ||||| |||||| |||||| ||||| || || Sbjct 502298 GTCCTGAATCTTGGATTTGACATTGTCAATGGTATCAGAGGATTCAACTTCGAGTGTAAT 502357 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| || || |||||||| ||||| | |||||| Sbjct 502358 AGTCTTACCGGTAAGAGTCTTAACAAATATCTGCAT 502393 Score = 156 bits (172), Expect = 1e-32 Identities = 160/209 (77%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 210906 ACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCC 210965 || ||||| ||||| || || |||||||| || ||||| | | || || ||||| ||| Sbjct 503325 ACGAGGTGTAGAGTTGATTCCTTTTGGATATTGTAATCAGATAAAGTTCTGCCATCCTCC 503384 Query 210966 AGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGG 211025 | |||||| ||||||||||| | | ||| || ||||| || | ||||| || |||||| Sbjct 503385 AACTGCTTACCTGCGAAGATCAATCTTTGCTGATCAGGTGGGATGCCTTCTTTATCCTGG 503444 Query 211026 ATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTT 211085 ||||| || ||||| ||||| ||||||||| ||| ||||| || || || ||||| Sbjct 503445 ATCTTCGACTTTACGTTGTCGATAGTGTCAGAGGATTCGACCTCAAGTGTAATAGTCTTA 503504 Query 211086 CCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || |||||||| ||||| | |||||| Sbjct 503505 CCAGTAAGAGTCTTAACAAAAATCTGCAT 503533 Score = 145 bits (160), Expect = 2e-29 Identities = 163/218 (75%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT 210956 ||||| | || || || | ||| ||||||||||| |||||||| || | || || ||| Sbjct 503088 AGTCTCAAAACCAGATGCAAAGTTGACTCTTTTTGAATGTTATAGTCAGATAGAGTTCTT 503147 Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016 ||||| ||||||||||| ||||| ||||| | | |||||||||||| || | ||||| Sbjct 503148 CCATCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCT 503207 Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076 || || |||||||| || ||||| ||||| |||||||| || ||||| | || Sbjct 503208 TTATCTTGGATCTTCGACTTTACGTTGTCGATAGTGTCAGAAGACTCCACCTCTAATGTA 503267 Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||| || || | || || ||||| | |||||| Sbjct 503268 ATAGTCTTACCGGTCAATGTTTTAACAAAAATCTGCAT 503305 >seq14 Length=1283838 Score = 179 bits (198), Expect = 9e-40 Identities = 165/209 (79%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 210906 ACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCC 210965 || ||||| || || || |||||||| |||||||| || | ||| || |||||||| ||| Sbjct 779178 ACCAGGTGCAGGGTAGATTCTTTTTGAATGTTATAGTCAGAAAGAGTTCTTCCATCCTCC 779119 Query 210966 AGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGG 211025 |||||||| || || ||||| | | |||||||| || |||| || ||||||||||| Sbjct 779118 AGCTGCTTACCAGCAAAGATCAATCTCTGTTGGTCGGGCGGAATGCCCTCCTTGTCCTGA 779059 Query 211026 ATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTT 211085 ||||| |||||||| ||||| ||||||||| ||||||||| || || || ||||| Sbjct 779058 ATCTTCGACTTCACGTTGTCGATTGTGTCAGAGGATTCAACCTCAAGTGTTATAGTCTTA 778999 Query 211086 CCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || |||||||| ||||| | |||||| Sbjct 778998 CCAGTAAGAGTCTTAACAAAAATCTGCAT 778970 Score = 174 bits (192), Expect = 4e-38 Identities = 168/216 (78%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 |||||||||||| || || || ||||| ||||| ||||| || || | ||| || ||||| Sbjct 779413 TCTTAGGACAAGATGCAGGGTTGACTCCTTTTGAATGTTGTAGTCAGAAAGAGTTCTTCC 779354 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 ||| ||||||||||| ||||||||||| || | ||||||||||| || | ||||| || Sbjct 779353 ATCCTCCAGCTGCTTACCTGCGAAGATCAGTCTCTGTTGGTCAGGTGGGATACCTTCTTT 779294 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 ||||||||||| || || || ||||| |||||||| || ||||| || || || Sbjct 779293 ATCCTGGATCTTCGACTTTACATTGTCGATAGTGTCAGAAGACTCTACCTCCAGCGTAAT 779234 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| || || || ||||| ||||| | |||||| Sbjct 779233 AGTCTTACCAGTAAGGGTCTTGACAAAAATCTGCAT 779198 Score = 165 bits (182), Expect = 2e-35 Identities = 162/209 (78%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 210906 ACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCC 210965 || ||||| || || || |||||||| ||||| || || | ||| || |||||||| ||| Sbjct 778950 ACCAGGTGCAGGGTAGATTCTTTTTGAATGTTGTAGTCAGAAAGAGTTCTTCCATCCTCC 778891 Query 210966 AGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGG 211025 |||||||| ||||||||||| || | ||||||||||| |||| ||||| || |||||| Sbjct 778890 AGCTGCTTACCTGCGAAGATCAGTCTCTGTTGGTCAGGTGGAATACCTTCTTTATCCTGG 778831 Query 211026 ATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTT 211085 ||||| || || || ||||| |||||||| || ||||| || || || ||||| Sbjct 778830 ATCTTCGACTTTACATTGTCGATAGTGTCAGAAGACTCTACCTCCAGCGTAATAGTCTTA 778771 Query 211086 CCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || ||||| ||||| | |||||| Sbjct 778770 CCAGTAAGGGTCTTGACAAAAATCTGCAT 778742 Score = 145 bits (160), Expect = 2e-29 Identities = 167/222 (75%), Gaps = 2/222 (1%) Strand=Plus/Minus Query 210906 ACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCC 210965 || || || || || || ||||||||||| || ||||| | | || || ||||| || Sbjct 778722 ACCAGATGCAGGGTTGATTCTTTTTGGATATTGTAATCAGACAAAGTTCTGCCATCCTCT 778663 Query 210966 AGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGG 211025 | ||| || ||||| ||||| | | ||| || ||||| || | ||||| || || ||| Sbjct 778662 AACTGTTTTCCTGCAAAGATTAACCTTTGCTGATCAGGTGGGATACCTTCTTTATCTTGG 778603 Query 211026 ATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTT 211085 ||||| |||||||| ||||| ||||||||| ||||||||| || || || ||||| Sbjct 778602 ATCTTCGACTTCACGTTGTCGATAGTGTCAGAGGATTCAACCTCAAGTGTAATAGTCTTA 778543 Query 211086 CCCGTGAGAGTCTTTACAAACACCTGCAT-TTTAT-GGTTAC 211125 || || |||||||| ||||| | |||||| | ||| |||||| Sbjct 778542 CCAGTAAGAGTCTTAACAAAAATCTGCATGTCTATCGGTTAC 778501 >seq4 Length=1091360 Score = 125 bits (138), Expect = 2e-23 Identities = 159/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||| || || | ||| | |||||| || || ||||||||||| || | | || || || Sbjct 719729 TCTAAGCACCAAGTGCAAAGTGGATTCCTTCTGGATGTTATAGTCAGACAACGTTCTGCC 719788 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 ||| |||| ||||| || |||||||| | | || |||||||| || | |||||||| Sbjct 719789 ATCCTCCAATTGCTTACCAGCGAAGATCAATCTCTGCTGGTCAGGTGGGATACCTTCCTT 719848 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 ||| || ||||| || || || ||||| |||||||| || || ||||| || || Sbjct 719849 GTCTTGAATCTTGGACTTAACATTGTCGATAGTGTCAGAAGACTCGACTTCGAGGGTAAT 719908 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 ||||| ||||| | ||||| || || | |||||| || Sbjct 719909 AGTCTTACCCGTCAAGGTCTTGACGAAAATCTGCATCTT 719947 >seq6 Length=1007293 Score = 116 bits (128), Expect = 9e-21 Identities = 150/207 (72%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||| | ||| | ||| | ||||| || ||||||||||| || || | | || || || Sbjct 101402 TCTCAAGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCC 101343 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 ||| |||| |||||| || ||||| || | | || |||||||| |||| || ||||| Sbjct 101342 ATCCTCCAACTGCTTACCAGCGAAAATCAATCTCTGCTGGTCAGGTGGAATACCCTCCTT 101283 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 ||| || ||||| || || || || || ||||| ||| ||| ||||| | |||||| Sbjct 101282 GTCTTGAATCTTAGACTTGACATTGTCAATAGTGTCGGAGGATTCGACCTCCAAAGTGAT 101223 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAA 211105 ||||| || || | |||||| || || Sbjct 101222 GGTCTTACCAGTCAAAGTCTTGACGAA 101196 >seq13 Length=1315104 Score = 113 bits (124), Expect = 1e-19 Identities = 149/207 (72%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||| | ||| | ||| | ||||| || |||||||||||||| || | | || || || Sbjct 1189861 TCTCAAGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTATAGTCAGACAAAGTTCTGCC 1189920 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 ||| |||| ||||| || ||||| || | | || |||||||| || | || ||||| Sbjct 1189921 ATCCTCCAATTGCTTACCAGCGAAAATCAATCTCTGCTGGTCAGGTGGGATACCCTCCTT 1189980 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 ||| || ||||| || ||||| || || ||||| || ||| ||||| | |||||| Sbjct 1189981 GTCTTGAATCTTAGACTTGACGTTGTCAATAGTGTCGGAAGATTCGACCTCCAAAGTGAT 1190040 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAA 211105 ||||| || || | |||||| || || Sbjct 1190041 GGTCTTACCAGTCAAAGTCTTGACGAA 1190067 >seq10 Length=1751495 Score = 111 bits (122), Expect = 4e-19 Identities = 156/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||| || || | ||| | || || || || || |||||||| || | | ||| || || Sbjct 575201 TCTAAGCACCAAGTGCAAGGTAGATTCCTTCTGAATGTTATAGTCAGACAAGGTTCTGCC 575260 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 ||| |||| ||||| || || ||||| | | || || ||||| |||| |||||||| Sbjct 575261 ATCCTCCAATTGCTTACCAGCAAAGATCAATCTCTGCTGATCAGGTGGAATACCTTCCTT 575320 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 ||| || |||||| || || || ||||| |||||||| || || || || || || Sbjct 575321 GTCTTGAATCTTTGACTTGACATTGTCGATAGTGTCAGAAGACTCGACTTCAAGGGTAAT 575380 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 ||||| ||||| | ||||| || || | |||||| || Sbjct 575381 AGTCTTACCCGTCAAGGTCTTGACGAAAATCTGCATCTT 575419 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159151732670570