Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20parabailii_20[genbank_20GCA_5F001984395.2_202017 -03-16] 18 sequences; 20,864,403 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq9 116 3e-21 seq14 95.1 8e-15 seq10 95.1 8e-15 seq4 95.1 8e-15 >seq9 Length=2005801 Score = 116 bits (128), Expect = 3e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || ||||| || || || || || || || || ||||||||||| ||| | Sbjct 502393 ATGCAGATATTTGTTAAGACTCTTACCGGTAAGACTATTACACTCGAAGTTGAATCCTCT 502334 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || || |||| ||| | ||| | || | || ||||| || || | ||||| || || Sbjct 502333 GATACCATTGACAATGTCAAATCCAAGA-TTCAGGACAAGGAGGGCATTCCGCCCGACCA 502275 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||| | || || ||||| || || |||||||| || | | | ||| | || ||||| Sbjct 502274 ACAGAGATTGATCTTTGCAGGTAAGCAACTGGAGGATGGAAGAACTCTTTCTGACTACAA 502215 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 ||| ||||||||||| || ||||| | || |||| || |||| || Sbjct 502214 CATTCAAAAAGAGTCGACCCTACATCTTGTGCTAAGATTAAGAGGTGG 502167 Score = 100 bits (110), Expect = 2e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || ||||| || || || || || || || || || || ||||| ||| | Sbjct 502849 ATGCAGATATTTGTTAAGACTCTTACTGGTAAGACTATTACACTTGAGGTTGAATCCTCT 502790 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 |||||| | || | |||| || || || ||||||||| | || || || ||| Sbjct 502789 GACACTATCGACAACGTAAAGTCGAAGATCCAGGATAAAGAAGGTATCCCACCTGACCAA 502730 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || | || || ||||| || || || ||||| || | | | ||| || || || ||| Sbjct 502729 CAAAGATTGATCTTTGCAGGTAAGCAGCTGGAGGATGGAAGAACTCTATCTGACTATAAC 502670 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAG 23825 || ||||||||||| || || ||| | ||||| || Sbjct 502669 ATTCAAAAAGAGTCAACTTTGCATCTGGTTTTGAG 502635 Score = 100 bits (110), Expect = 2e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || ||||| || || || || || || || || || || ||||| ||| | Sbjct 503077 ATGCAGATATTTGTTAAGACTCTTACTGGTAAGACTATTACACTTGAGGTTGAATCCTCT 503018 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 |||||| | || | |||| || || || ||||||||| | || || || ||| Sbjct 503017 GACACTATCGACAACGTAAAGTCGAAGATCCAGGATAAAGAAGGTATCCCACCTGACCAA 502958 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || | || || ||||| || || || ||||| || | | | ||| || || || ||| Sbjct 502957 CAAAGATTGATCTTTGCAGGTAAGCAGCTGGAGGATGGAAGAACTCTATCTGACTATAAC 502898 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAG 23825 || ||||||||||| || || ||| | ||||| || Sbjct 502897 ATTCAAAAAGAGTCAACTTTGCATCTGGTTTTGAG 502863 Score = 95.1 bits (104), Expect = 8e-15 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || ||||| || || || || || || || || || || ||||| ||| | Sbjct 502621 ATGCAGATATTTGTTAAGACTCTTACTGGTAAGACTATTACACTTGAGGTTGAATCCTCT 502562 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 |||||| | || | |||| || || || ||||||||| | || || || ||| Sbjct 502561 GACACTATCGACAACGTAAAGTCGAAGATCCAGGATAAAGAAGGTATCCCACCTGACCAA 502502 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || | || || ||||| || || || ||||| || | | | ||| | || || ||| Sbjct 502501 CAAAGATTGATCTTTGCAGGTAAGCAGCTGGAGGATGGAAGAACTCTGTCTGACTATAAC 502442 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAG 23825 || ||||||||||| || || || || ||||| || Sbjct 502441 ATTCAAAAAGAGTCAACTTTGCACTTGGTTTTGAG 502407 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| |||||||| | || || || || || || | || || || || | Sbjct 503305 ATGCAGATTTTTGTTAAAACATTGACCGGTAAGACTATTACATTAGAGGTGGAGTCTTCT 503246 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 |||||| | || | |||| || || || ||||||||| | || || || ||| Sbjct 503245 GACACTATCGACAACGTAAAGTCGAAGATCCAAGATAAAGAAGGTATCCCACCTGACCAA 503186 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || | || || ||||| || || || ||||| || | | | ||| || || || ||| Sbjct 503185 CAAAGATTGATCTTTGCAGGTAAGCAGCTGGAGGATGGAAGAACTCTATCTGACTATAAC 503126 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAG 23825 || ||||||||||| || || ||| | ||||| || Sbjct 503125 ATTCAAAAAGAGTCAACTTTGCATCTGGTTTTGAG 503091 >seq14 Length=1283838 Score = 95.1 bits (104), Expect = 8e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| ||||| || || || || || || || || || || ||||| ||| | Sbjct 778514 ATGCAGATTTTTGTTAAGACTCTTACTGGTAAGACTATTACACTTGAGGTTGAATCCTCT 778573 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 |||||| | || | | || || || || ||||||||| | || || ||||| Sbjct 778574 GACACTATCGACAACGTGAAGTCGAAGATCCAAGATAAAGAAGGTATCCCACCTGATCAG 778633 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || | ||||| ||||| || ||||| | || || | | ||||| |||||||| Sbjct 778634 CAAAGGTTAATCTTTGCAGGAAAACAGTTAGAGGATGGCAGAACTTTGTCTGATTACAAT 778693 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || |||||||| || || | ||| | ||||| || || |||| || Sbjct 778694 ATCCAAAAAGAATCAACCCTGCATCTGGTTTTGAGATTAAGAGGTGG 778740 Score = 86.0 bits (94), Expect = 4e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| ||||| || || || || || || || || || || ||||| ||| | Sbjct 778970 ATGCAGATTTTTGTTAAGACTCTTACTGGTAAGACTATAACACTTGAGGTTGAATCCTCT 779029 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | || | | || || ||| ||||| || || | ||||| || ||| Sbjct 779030 GACACAATCGACAACGTGAAGTCGAAGATTCAGGACAAGGAGGGCATTCCGCCCGACCAA 779089 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | || || ||||| || || || ||||| || | | | ||| | || || ||| Sbjct 779090 CAGAGATTGATCTTTGCTGGTAAGCAGCTGGAGGATGGAAGAACTCTTTCTGACTATAAC 779149 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || |||||||| || || | || | ||||| || || |||| || Sbjct 779150 ATTCAAAAAGAATCTACCCTGCACCTGGTTTTGAGATTAAGAGGTGG 779196 Score = 86.0 bits (94), Expect = 4e-12 Identities = 178/260 (68%), Gaps = 5/260 (2%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| || || ||||| || || || || || || || || || || || | Sbjct 779198 ATGCAGATTTTTGTCAAGACCCTTACTGGTAAGACTATTACGCTGGAGGTAGAGTCTTCT 779257 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 |||||| | || | |||| || || || ||||||||| | || || || ||| Sbjct 779258 GACACTATCGACAATGTAAAGTCGAAGATCCAGGATAAAGAAGGTATCCCACCTGACCAA 779317 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | | || || || || || || ||||| || | | | ||| | || |||||| Sbjct 779318 CAGAGACTGATCTTCGCAGGTAAGCAGCTGGAGGATGGAAGAACTCTTTCTGACTACAAC 779377 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGATCAGC-AGTTAA 23849 || ||||| ||||| || | ||| | || |||| ||| |||| || | || || | Sbjct 779378 ATTCAAAAGGAGTCAACCCTGCATCTTGTCCTAAGATTGAGAGGTGGTT--GCTAGATTC 779435 Query 23850 AGATGAATTGTATTAATGTA 23869 || || ||||| |||||||| Sbjct 779436 AGGTG-ATTGT-TTAATGTA 779453 >seq10 Length=1751495 Score = 95.1 bits (104), Expect = 8e-15 Identities = 161/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 || |||||||||||||| || ||| | ||||| || || || || || ||||| || || Sbjct 575419 AAGATGCAGATTTTCGTCAAGACCTTGACGGGTAAGACTATTACCCTTGAAGTCGAGTCT 575360 Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726 | |||||| | || ||| | || | ||| ||| ||||| |||||| | || || || Sbjct 575359 TCTGACACTATCGACAATGTCAAGTC-AAAGATTCAAGACAAGGAAGGTATTCCACCTGA 575301 Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786 ||| ||| | || || ||||| || || ||| |||| || | | || || || || Sbjct 575300 TCAGCAGAGATTGATCTTTGCTGGTAAGCAATTGGAGGATGGCAGAACCTTGTCTGACTA 575241 Query 23787 CAACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 ||||| || || || || || || || || || | || ||| |||| || Sbjct 575240 TAACATTCAGAAGGAATCTACCTTGCACTTGGTGCTTAGATTGAGAGGTGG 575190 >seq4 Length=1091360 Score = 95.1 bits (104), Expect = 8e-15 Identities = 161/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 || |||||||||||||| || ||| | ||||| || || || || |||||||| || || Sbjct 719947 AAGATGCAGATTTTCGTCAAGACCTTGACGGGTAAGACTATTACCCTCGAAGTCGAGTCT 719888 Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726 | |||||| | || ||| |||| | || ||| ||||| |||||| | || || || Sbjct 719887 TCTGACACTATCGACAATGTTAAGTC-CAAGATTCAAGACAAGGAAGGTATCCCACCTGA 719829 Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786 || ||| | || || || || || || ||| |||| || | | || || || || Sbjct 719828 CCAGCAGAGATTGATCTTCGCTGGTAAGCAATTGGAGGATGGCAGAACGTTGTCTGACTA 719769 Query 23787 CAACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 ||||| || || || ||||| || || || || | || ||| |||| || Sbjct 719768 TAACATCCAGAAGGAATCCACTTTGCACTTGGTGCTTAGATTGAGAGGTGG 719718 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338009525849144