Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20parabailii_20[genbank_20GCA_5F001984395.2_202017 -03-16] 18 sequences; 20,864,403 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq6 158 3e-33 seq14 140 8e-28 seq9 136 9e-27 seq13 134 3e-26 seq4 134 3e-26 seq10 120 7e-22 seq16 86.0 1e-11 seq7 86.0 1e-11 >seq6 Length=1007293 Score = 158 bits (174), Expect = 3e-33 Identities = 159/207 (77%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||||| ||| | ||| | |||||||| ||||||| ||||| || | ||||||||| || Sbjct 101402 TCTCAAGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCC 101343 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 ||| || | |||||| |||||||| || | || || ||||| || |||||||| ||||| Sbjct 101342 ATCCTCCAACTGCTTACCAGCGAAAATCAATCTCTGCTGGTCAGGTGGAATACCCTCCTT 101283 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 |||||| ||||| ||| ||| || || ||||| |||| ||| || || || ||||| Sbjct 101282 GTCTTGAATCTTAGACTTGACATTGTCAATAGTGTCGGAGGATTCGACCTCCAAAGTGAT 101223 Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAA 225704 ||||| || |||||||| || | ||| Sbjct 101222 GGTCTTACCAGTCAAAGTCTTGACGAA 101196 >seq14 Length=1283838 Score = 140 bits (154), Expect = 8e-28 Identities = 170/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||||| || || || || || ||||||||||||| ||||||||| | ||||||||| || Sbjct 778729 TCTCAAAACCAGATGCAGGGTTGATTCTTTTTGGATATTGTAATCAGACAAAGTTCTGCC 778670 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 ||| |||| ||| || || || ||||| | | ||| || || || || |||||||| || Sbjct 778669 ATCCTCTAACTGTTTTCCTGCAAAGATTAACCTTTGCTGATCAGGTGGGATACCTTCTTT 778610 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 ||||||||||| |||||| ||||| ||||| |||| ||| || || | || || Sbjct 778609 ATCTTGGATCTTCGACTTCACGTTGTCGATAGTGTCAGAGGATTCAACCTCAAGTGTAAT 778550 Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT-TTTAT-GGTTAC 225724 ||||| || || | ||| || | || | ||||| | ||| |||||| Sbjct 778549 AGTCTTACCAGTAAGAGTCTTAACAAAAATCTGCATGTCTATCGGTTAC 778501 Score = 138 bits (152), Expect = 3e-27 Identities = 151/201 (75%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||||| || ||||| || || ||||||||||| | || || || | | |||||| || Sbjct 779185 TCTCAAAACCAGGTGCAGGGTAGATTCTTTTTGAATGTTATAGTCAGAAAGAGTTCTTCC 779126 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 ||| || |||||||| ||||| ||||| | || ||||||||||||||||| || ||||| Sbjct 779125 ATCCTCCAGCTGCTTACCAGCAAAGATCAATCTCTGTTGGTCGGGCGGAATGCCCTCCTT 779066 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 ||| || ||||| |||||| ||||| ||||| |||| ||| || || | || || Sbjct 779065 GTCCTGAATCTTCGACTTCACGTTGTCGATTGTGTCAGAGGATTCAACCTCAAGTGTTAT 779006 Query 225678 CGTCTTGCCCGTCAAAGTTTT 225698 ||||| || || | ||| || Sbjct 779005 AGTCTTACCAGTAAGAGTCTT 778985 Score = 134 bits (148), Expect = 3e-26 Identities = 145/192 (76%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||||| || ||||| || || ||||||||||| | ||||| || | | |||||| || Sbjct 778957 TCTCAAAACCAGGTGCAGGGTAGATTCTTTTTGAATGTTGTAGTCAGAAAGAGTTCTTCC 778898 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 ||| || |||||||| || |||||||| |||| |||||||| || ||||||||||| || Sbjct 778897 ATCCTCCAGCTGCTTACCTGCGAAGATCAGTCTCTGTTGGTCAGGTGGAATACCTTCTTT 778838 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 || |||||||| ||| ||| ||||| ||||| || | || || || | ||| || Sbjct 778837 ATCCTGGATCTTCGACTTTACATTGTCGATAGTGTCAGAAGACTCTACCTCCAGCGTAAT 778778 Query 225678 CGTCTTGCCCGT 225689 ||||| || || Sbjct 778777 AGTCTTACCAGT 778766 >seq9 Length=2005801 Score = 136 bits (150), Expect = 9e-27 Identities = 152/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555 ||||||| || || || | ||| || |||||||| | || || || | | |||||| Sbjct 503088 AGTCTCAAAACCAGATGCAAAGTTGACTCTTTTTGAATGTTATAGTCAGATAGAGTTCTT 503147 Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615 ||||| || |||||||| || || ||||| | || ||||||||| || || |||||||| Sbjct 503148 CCATCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCT 503207 Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675 || ||||||||||| ||| || ||||| ||||| || | ||||| ||||| || Sbjct 503208 TTATCTTGGATCTTCGACTTTACGTTGTCGATAGTGTCAGAAGACTCCACCTCTAATGTA 503267 Query 225676 ATCGTCTTGCCCGTCAAAGTTTT 225698 || ||||| || ||||| ||||| Sbjct 503268 ATAGTCTTACCGGTCAATGTTTT 503290 Score = 120 bits (132), Expect = 7e-22 Identities = 147/201 (73%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||| || ||||| || || || || |||||||| | ||||| || | | |||||| || Sbjct 502178 TCTTAGCACAAGATGTAGGGTCGACTCTTTTTGAATGTTGTAGTCAGAAAGAGTTCTTCC 502237 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 ||| || || ||||| || || ||||| | || ||||||||||||||||| || ||||| Sbjct 502238 ATCCTCCAGTTGCTTACCTGCAAAGATCAATCTCTGTTGGTCGGGCGGAATGCCCTCCTT 502297 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 ||| || ||||| || ||| || ||||| || |||| ||| || || | || || Sbjct 502298 GTCCTGAATCTTGGATTTGACATTGTCAATGGTATCAGAGGATTCAACTTCGAGTGTAAT 502357 Query 225678 CGTCTTGCCCGTCAAAGTTTT 225698 ||||| || || | ||| || Sbjct 502358 AGTCTTACCGGTAAGAGTCTT 502378 >seq13 Length=1315104 Score = 134 bits (148), Expect = 3e-26 Identities = 154/207 (74%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||||| ||| | ||| | |||||||| ||||||| || || || | ||||||||| || Sbjct 1189861 TCTCAAGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTATAGTCAGACAAAGTTCTGCC 1189920 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 ||| || | ||||| |||||||| || | || || ||||| || || ||||| ||||| Sbjct 1189921 ATCCTCCAATTGCTTACCAGCGAAAATCAATCTCTGCTGGTCAGGTGGGATACCCTCCTT 1189980 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 |||||| ||||| ||| || || || ||||| || | ||| || || || ||||| Sbjct 1189981 GTCTTGAATCTTAGACTTGACGTTGTCAATAGTGTCGGAAGATTCGACCTCCAAAGTGAT 1190040 Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAA 225704 ||||| || |||||||| || | ||| Sbjct 1190041 GGTCTTACCAGTCAAAGTCTTGACGAA 1190067 >seq4 Length=1091360 Score = 134 bits (148), Expect = 3e-26 Identities = 161/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||| || || | ||| | ||||||||| || |||| || || || | ||| ||||| || Sbjct 719729 TCTAAGCACCAAGTGCAAAGTGGATTCCTTCTGGATGTTATAGTCAGACAACGTTCTGCC 719788 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 ||| || | ||||| ||||||||||| | || || ||||| || || ||||||||||| Sbjct 719789 ATCCTCCAATTGCTTACCAGCGAAGATCAATCTCTGCTGGTCAGGTGGGATACCTTCCTT 719848 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 |||||| ||||| ||| ||| ||||| ||||| || | || || || | || || Sbjct 719849 GTCTTGAATCTTGGACTTAACATTGTCGATAGTGTCAGAAGACTCGACTTCGAGGGTAAT 719908 Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 ||||| |||||||| || || | ||| | ||||| || Sbjct 719909 AGTCTTACCCGTCAAGGTCTTGACGAAAATCTGCATCTT 719947 >seq10 Length=1751495 Score = 120 bits (132), Expect = 7e-22 Identities = 158/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||| || || | ||| | || ||||| || || | || || || | ||| ||||| || Sbjct 575201 TCTAAGCACCAAGTGCAAGGTAGATTCCTTCTGAATGTTATAGTCAGACAAGGTTCTGCC 575260 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 ||| || | ||||| ||||| ||||| | || || || || || |||||||||||||| Sbjct 575261 ATCCTCCAATTGCTTACCAGCAAAGATCAATCTCTGCTGATCAGGTGGAATACCTTCCTT 575320 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 |||||| |||||| ||| ||| ||||| ||||| || | || || || | || || Sbjct 575321 GTCTTGAATCTTTGACTTGACATTGTCGATAGTGTCAGAAGACTCGACTTCAAGGGTAAT 575380 Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 ||||| |||||||| || || | ||| | ||||| || Sbjct 575381 AGTCTTACCCGTCAAGGTCTTGACGAAAATCTGCATCTT 575419 >seq16 Length=1240939 Score = 86.0 bits (94), Expect = 1e-11 Identities = 82/105 (78%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 4470 GAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACC 4529 ||| || ||||||||||| || || || || || ||||| ||||||||||| |||||||| Sbjct 516557 GAAGATCTGACCATCAGTGATGGAAATGACGTTAGTAGGAATATAAGCAGACACATCACC 516616 Query 4530 TGCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACC 4574 | || || |||| || ||| ||||| || | || |||||||| Sbjct 516617 ACCCTGGGTCTCGATAATAGGCAAGGCAGTCAAAGAACCACCACC 516661 >seq7 Length=858772 Score = 86.0 bits (94), Expect = 1e-11 Identities = 82/105 (78%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 4470 GAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACC 4529 ||| |||||||||||||| || || || || || ||||| ||||||||||| |||||||| Sbjct 491714 GAAGATTTGACCATCAGTGATGGAAATGACGTTAGTAGGAATATAAGCAGACACATCACC 491773 Query 4530 TGCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACC 4574 | || || |||| || ||| ||||| || | || || ||||| Sbjct 491774 ACCCTGGGTCTCGATAATAGGCAAGGCGGTCAAAGAACCCCCACC 491818 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192530924972492