Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20parabailii_20[genbank_20GCA_5F001984395.2_202017 -03-16] 18 sequences; 20,864,403 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq14 125 2e-23 seq9 125 2e-23 seq4 111 4e-19 >seq14 Length=1283838 Score = 125 bits (138), Expect = 2e-23 Identities = 167/231 (72%), Gaps = 1/231 (0%) Strand=Plus/Minus Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948 ||| ||||||||||| || || ||||| ||||| |||||||| || | | |||||| || Sbjct 779413 TCTTAGGACAAGATGCAGGGTTGACTCCTTTTGAATGTTGTAGTCAGAAAGAGTTCTTCC 779354 Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008 ||| || || || || |||||||| || ||||| ||||| | | ||| ||||| || Sbjct 779353 ATCCTCCAGCTGCTTACCTGCGAAGATCAGTCTCTGTTGGTCAGGTGGGATACCTTCTTT 779294 Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068 || || || || || ||| | || | |||| ||| |||||| || || ||||| Sbjct 779293 ATCCTGGATCTTCGACTTTACATTGTCGATAGTGTCAGAAGACTCTACCTCCAGCGTAAT 779234 Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTTACC-CTTACTCT 152118 ||| || || || || ||||| || || | |||||| ||| |||| ||| Sbjct 779233 AGTCTTACCAGTAAGGGTCTTGACAAAAATCTGCATACCACCTCTTAATCT 779183 Score = 111 bits (122), Expect = 4e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 151896 ACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCT 151955 || ||||| || || || ||||||||||| |||||||| | |||||||| ||||| ||| Sbjct 778722 ACCAGATGCAGGGTTGATTCTTTTTGGATATTGTAATCAGACAAAGTTCTGCCATCCTCT 778663 Query 151956 AGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGA 152015 | ||| || || ||||| | ||| ||||| || | | ||| ||||| || ||||| Sbjct 778662 AACTGTTTTCCTGCAAAGATTAACCTTTGCTGATCAGGTGGGATACCTTCTTTATCTTGG 778603 Query 152016 ATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTG 152075 || || || || | || | |||| || || || ||||| |||||||| || Sbjct 778602 ATCTTCGACTTCACGTTGTCGATAGTGTCAGAGGATTCAACCTCAAGTGTAATAGTCTTA 778543 Query 152076 CCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || |||||||| || || | |||||| Sbjct 778542 CCAGTAAGAGTCTTAACAAAAATCTGCAT 778514 >seq9 Length=2005801 Score = 125 bits (138), Expect = 2e-23 Identities = 167/231 (72%), Gaps = 1/231 (0%) Strand=Plus/Plus Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948 ||| || |||||||| || || ||||||||||| |||||||| || | | |||||| || Sbjct 502178 TCTTAGCACAAGATGTAGGGTCGACTCTTTTTGAATGTTGTAGTCAGAAAGAGTTCTTCC 502237 Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008 ||| || || || || || ||||| | ||||| ||||| | || || || ||||| Sbjct 502238 ATCCTCCAGTTGCTTACCTGCAAAGATCAATCTCTGTTGGTCGGGCGGAATGCCCTCCTT 502297 Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068 || ||||| || ||||||| | || | | | || || || ||||| || ||||| Sbjct 502298 GTCCTGAATCTTGGATTTGACATTGTCAATGGTATCAGAGGATTCAACTTCGAGTGTAAT 502357 Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTTACC-CTTACTCT 152118 ||| || || || |||||||| || || | |||||| ||| |||| ||| Sbjct 502358 AGTCTTACCGGTAAGAGTCTTAACAAATATCTGCATACCACCTCTTAGTCT 502408 Score = 98.7 bits (108), Expect = 2e-15 Identities = 164/236 (69%), Gaps = 1/236 (0%) Strand=Plus/Plus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 || ||||| | || ||||| | ||| ||||||||||| ||||| || || | || |||| Sbjct 502629 CTTAGTCTCAAAACCAGATGCAAAGTTGACTCTTTTTGAATGTTATAGTCAGATAGAGTT 502688 Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 || ||||| || || || || || ||||| | || || ||||| | | ||| ||| Sbjct 502689 CTTCCATCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCT 502748 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063 || || || || || || || || | || | |||| || || || ||||| Sbjct 502749 TCTTTATCCTGGATCTTCGACTTTACGTTGTCGATAGTGTCAGAGGATTCAACCTCAAGT 502808 Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTTACC-CTTACTCT 152118 |||||||| || || || |||||||| || || | |||||| ||| |||| ||| Sbjct 502809 GTAATAGTCTTACCAGTAAGAGTCTTAACAAATATCTGCATACCACCTCTTAGTCT 502864 Score = 98.7 bits (108), Expect = 2e-15 Identities = 164/236 (69%), Gaps = 1/236 (0%) Strand=Plus/Plus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 || ||||| | || ||||| | ||| ||||||||||| ||||| || || | || |||| Sbjct 502857 CTTAGTCTCAAAACCAGATGCAAAGTTGACTCTTTTTGAATGTTATAGTCAGATAGAGTT 502916 Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 || ||||| || || || || || ||||| | || || ||||| | | ||| ||| Sbjct 502917 CTTCCATCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCT 502976 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063 || || || || || || || || | || | |||| || || || ||||| Sbjct 502977 TCTTTATCCTGGATCTTCGACTTTACGTTGTCGATAGTGTCAGAGGATTCAACCTCAAGT 503036 Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTTACC-CTTACTCT 152118 |||||||| || || || |||||||| || || | |||||| ||| |||| ||| Sbjct 503037 GTAATAGTCTTACCAGTAAGAGTCTTAACAAATATCTGCATACCACCTCTTAGTCT 503092 Score = 89.7 bits (98), Expect = 1e-12 Identities = 162/236 (69%), Gaps = 1/236 (0%) Strand=Plus/Plus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 || ||||| | || ||||| | ||| ||||||||||| ||||| || || | || |||| Sbjct 503085 CTTAGTCTCAAAACCAGATGCAAAGTTGACTCTTTTTGAATGTTATAGTCAGATAGAGTT 503144 Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 || ||||| || || || || || ||||| | || || ||||| | | ||| ||| Sbjct 503145 CTTCCATCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCT 503204 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063 || || ||||| || || || || | || | |||| ||| ||| || || | Sbjct 503205 TCTTTATCTTGGATCTTCGACTTTACGTTGTCGATAGTGTCAGAAGACTCCACCTCTAAT 503264 Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTTACC-CTTACTCT 152118 |||||||| || || || | || || || || | |||||| ||| |||| ||| Sbjct 503265 GTAATAGTCTTACCGGTCAATGTTTTAACAAAAATCTGCATACCACCTCTTAATCT 503320 Score = 84.2 bits (92), Expect = 5e-11 Identities = 154/223 (69%), Gaps = 2/223 (1%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || | ||| ||||||||||| ||||| || || | | |||||| ||||| || | Sbjct 502415 CAAG-TGCAAAGTTGACTCTTTTTGAATGTTATAGTCAGACAGAGTTCTTCCATCCTCCA 502473 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || || || ||||| | || || ||||| | | ||| ||||| || || || | Sbjct 502474 GCTGCTTACCTGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCTTTATCCTGGA 502533 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || || || | || | |||| || || || ||||| |||||||| || | Sbjct 502534 TCTTCGACTTTACGTTGTCGATAGTGTCAGAGGATTCAACCTCAAGTGTAATAGTCTTAC 502593 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCATTTTACC-CTTACTCT 152118 | || |||||||| || || | |||||| ||| |||| ||| Sbjct 502594 CAGTAAGAGTCTTAACAAATATCTGCATACCACCTCTTAGTCT 502636 >seq4 Length=1091360 Score = 111 bits (122), Expect = 4e-19 Identities = 152/211 (72%), Gaps = 1/211 (0%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || | ||| || || || |||||||| || || | || ||||| ||||| || | Sbjct 719738 CAAG-TGCAAAGTGGATTCCTTCTGGATGTTATAGTCAGACAACGTTCTGCCATCCTCCA 719796 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 || || |||||||| | ||||||||||| | | ||| |||||||| ||||||| Sbjct 719797 ATTGCTTACCAGCGAAGATCAATCTCTGCTGGTCAGGTGGGATACCTTCCTTGTCTTGAA 719856 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || || ||| | || | |||| ||| ||| ||||| || |||||||| || | Sbjct 719857 TCTTGGACTTAACATTGTCGATAGTGTCAGAAGACTCGACTTCGAGGGTAATAGTCTTAC 719916 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 |||| | ||||| ||||| | |||||| || Sbjct 719917 CCGTCAAGGTCTTGACGAAAATCTGCATCTT 719947 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153820533900078