Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20parabailii_20[genbank_20GCA_5F001984395.2_202017 -03-16] 18 sequences; 20,864,403 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq14 105 6e-18 seq10 86.0 6e-12 seq4 82.4 7e-11 >seq14 Length=1283838 Score = 105 bits (116), Expect = 6e-18 Identities = 155/214 (72%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 41651 AACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCG 41710 || ||||| ||||| || || || |||||||||||||| || || || | | || Sbjct 779181 AAAACCAGGTGCAGGGTAGATTCTTTTTGAATGTTATAGTCAGAAAGAGTTCTTCCATCC 779122 Query 41711 TCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCC 41770 || |||||||| || || || |||| | ||||||||| | |||| || |||||||||| Sbjct 779121 TCCAGCTGCTTACCAGCAAAGATCAATCTCTGTTGGTCGGGCGGAATGCCCTCCTTGTCC 779062 Query 41771 ATGATTTTTTG-CTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCG 41828 ||| | || | |||| ||| | | | ||||| || || ||||| | ||||| | Sbjct 779061 -TGAATCTTCGACTTC-ACGTTGTCGATTGTGTCAGAGGATTCAACCTCAAGTGTTATAG 779004 Query 41829 TTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 | ||||| || || ||||| || ||||||||||| Sbjct 779003 TCTTACCAGTAAGAGTCTTAACAAAAATCTGCAT 778970 Score = 105 bits (116), Expect = 6e-18 Identities = 151/211 (72%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 || |||||||| || |||||| |||||||| ||||| || || || | | || || Sbjct 779406 ACAAGATGCAGGGTTGACTCCTTTTGAATGTTGTAGTCAGAAAGAGTTCTTCCATCCTCC 779347 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 |||||||| || ||||| ||||| | ||||||||| | || | | || || ||| | Sbjct 779346 AGCTGCTTACCTGCGAAGATCAGTCTCTGTTGGTCAGGTGGGATACCTTCTTTATCCTGG 779287 Query 41774 ATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTT 41831 || || ||| || | ||| | ||||| ||||| ||||||| ||| || || | Sbjct 779286 ATCTTCGACTTTACATTGTCGATA--GTGTCAGAAGACTCTACCTCCAGCGTAATAGTCT 779229 Query 41832 TACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| || || ||||| || ||||||||||| Sbjct 779228 TACCAGTAAGGGTCTTGACAAAAATCTGCAT 779198 Score = 102 bits (112), Expect = 8e-17 Identities = 152/214 (71%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 41651 AACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCG 41710 || ||||| ||||| || || || |||||||| ||||| || || || | | || Sbjct 778953 AAAACCAGGTGCAGGGTAGATTCTTTTTGAATGTTGTAGTCAGAAAGAGTTCTTCCATCC 778894 Query 41711 TCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCC 41770 || |||||||| || ||||| ||||| | ||||||||| | |||| | || || ||| Sbjct 778893 TCCAGCTGCTTACCTGCGAAGATCAGTCTCTGTTGGTCAGGTGGAATACCTTCTTTATCC 778834 Query 41771 ATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCG 41828 ||| || ||| || | ||| | ||||| ||||| ||||||| ||| || | Sbjct 778833 TGGATCTTCGACTTTACATTGTCGATA--GTGTCAGAAGACTCTACCTCCAGCGTAATAG 778776 Query 41829 TTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 | ||||| || || ||||| || ||||||||||| Sbjct 778775 TCTTACCAGTAAGGGTCTTGACAAAAATCTGCAT 778742 >seq10 Length=1751495 Score = 86.0 bits (94), Expect = 6e-12 Identities = 140/197 (71%), Gaps = 6/197 (3%) Strand=Plus/Plus Query 41672 TCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 41731 |||||||||||||||||||| || | ||| | | || || | ||||| || || || Sbjct 575226 TCCTTCTGAATGTTATAGTCAGACAAGGTTCTGCCATCCTCCAATTGCTTACCAGCAAAG 575285 Query 41732 ATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTG-CTT--CAAC 41788 |||| | ||| || || | |||| | |||||||| ||| | |||| ||| || Sbjct 575286 ATCAATCTCTGCTGATCAGGTGGAATACCTTCCTTGTCT-TGAATCTTTGACTTGACATT 575344 Query 41789 GACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTT 41848 | ||| | ||||| ||||| || || | || || || |||||||||| ||||| Sbjct 575345 GTCGATA--GTGTCAGAAGACTCGACTTCAAGGGTAATAGTCTTACCCGTCAAGGTCTTG 575402 Query 41849 ACGAAAATCTGCATGTT 41865 |||||||||||||| || Sbjct 575403 ACGAAAATCTGCATCTT 575419 >seq4 Length=1091360 Score = 82.4 bits (90), Expect = 7e-11 Identities = 148/214 (69%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 41653 CACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTC 41712 ||||| |||| ||| |||||||| ||||||||||| || | || | | || || Sbjct 719735 CACCAAGTGCAAAGTGGATTCCTTCTGGATGTTATAGTCAGACAACGTTCTGCCATCCTC 719794 Query 41713 GAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCAT 41772 | ||||| || ||||| |||| | ||| ||||| | || | | |||||||| | Sbjct 719795 CAATTGCTTACCAGCGAAGATCAATCTCTGCTGGTCAGGTGGGATACCTTCCTTGTCT-T 719853 Query 41773 GATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTT 41831 || | || | | ||| | | | |||||| ||||| || || | || || || | Sbjct 719854 GAATCTTGGACTTAACATTGTCGATAGTGTCAGAAGACTCGACTTCGAGGGTAATAGTCT 719913 Query 41832 TACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 ||||||||| ||||| |||||||||||||| || Sbjct 719914 TACCCGTCAAGGTCTTGACGAAAATCTGCATCTT 719947 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462303895981600