Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20rouxii_20[genbank_20GCA_5F000026365.1_202009-06- 05] 7 sequences; 9,764,635 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq7 199 4e-46 seq3 123 2e-23 >seq7 Length=1865392 Score = 199 bits (220), Expect = 4e-46 Identities = 608/925 (66%), Gaps = 31/925 (3%) Strand=Plus/Minus Query 57507 GATGAACCA---CTTTTGCAAGAGAATCCCCGTAGATTTGTCATGTTTCCGATTGAATAT 57563 ||||||||| ||| || || | || | |||||||||| | || || ||| ||||| Sbjct 1151665 GATGAACCATTACTTGTGGAAAATAAAC---GTAGATTTGTTCTTTTCCCCATTAAATAT 1151609 Query 57564 CCAGACATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTA 57623 | || |||||| | ||||| | ||||||||||| |||||||| | |||||| | Sbjct 1151608 CATGAAATTTGGCAAGCTTACAAGAGAGCAGAAGCATCATTTTGGACAGCTGAAGAAATC 1151549 Query 57624 GACCTGTCTAAGGATCTGAGCGATTGGGATTCCC---TCAAAGAATCTGAGAGAAATTTT 57680 || | || |||||| || |||||| || | | ||| ||| ||| |||| Sbjct 1151548 GATTTATCGAAGGATTTGGATGATTGGAATAATAAGATGAGTGAAGGTGAAAGATATTTC 1151489 Query 57681 ATTAAACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTC 57740 ||| | || | ||||| || || |||||||||||||||||||| ||||||||||| Sbjct 1151488 ATTTCAAGAGTCCTAGCGTTCTTTGCAGCATCCGATGGTATTGTTAATGAGAATTTGGTG 1151429 Query 57741 GAAAGATTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTG 57800 || | || || || || ||| | ||||||| | ||||| ||||| || || | Sbjct 1151428 GAGAATTTCTCTGCTGAGGTCCAAATACCGGAGGCTAAGTGCTTCTACGGGTTCCAGATT 1151369 Query 57801 GCCATTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGAC 57860 || ||||| | ||||| |||| ||||||||| | || ||||| ||| | || Sbjct 1151368 ATGATGGAAAATATCCATTCTGAAACTTATTCGCTATTGATTGATACCTACAGTAGAGAT 1151309 Query 57861 AACGACGAGAAACGTA-GACTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAA 57919 | ||| || || | | | || || || || |||| || || | ||| | || Sbjct 1151308 ACCGAGGA-AAGTGAATTTTTATTTAATGCAATTGAAAACATTCCACCAATCAAGGAAAA 1151250 Query 57920 GGCAGAGTGGTCAATCAAATGGATAAAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAAT 57979 |||||| ||| |||| | ||||| || || || ||| | || || || || | Sbjct 1151249 GGCAGAATGGGCAATTAGGTGGATTCAAGACGATACTGCCCTTTATGCTGAAAGATTAGT 1151190 Query 57980 CGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGAT 58039 || || ||||| || |||||| | ||||| ||||| ||||| || || |||||| | Sbjct 1151189 GGCCTTTGCCGCAGTGGAAGGTGTTTTCTTCTCGGGATCATTTGCTGCCATCTTTTGGTT 1151130 Query 58040 GAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGA 58099 |||||| || || ||||| || | || || || || ||||| | | ||||| Sbjct 1151129 GAAGAAGAAGGGTCTAATGCCAGGTTTAACTTTCTCTAATGAATTGATCTGTAGAGACGA 1151070 Query 58100 GGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAA---ACCGAC 58156 ||| | || || |||||||| || ||| || || | |||| | || || ||| | Sbjct 1151069 AGGTTTGCACACAGATTTTGCTTGTCTA--TTATTCGCCCATT-TGAAGAACAGACCAAG 1151013 Query 58157 GCGGGATCGCATCTTGGA---CATTATCACCGAGGCGGTCGCGATCGAAAATGAGTT--T 58211 | || ||| |||| || || || || || || | || || || ||| | | Sbjct 1151012 TCCAGA---CATTGTGGAAAGAATCATTACTGAAGCTGTATCAATTGAGAA-GAGATACT 1150957 Query 58212 GTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATG--TCAAAGT 58269 | | || || || || ||||| |||| || |||||| | | ||| |||| | Sbjct 1150956 TTGA-AGATGCTCTCCCCGTGGCTCTGCTGGGCATGAACGCCGCGCTAATGAATCAA--T 1150900 Query 58270 ACATTGAGTTTGTTGCCGACAGACTTTTGCTCGAACTGATTGGAGAGCGTCATTACAACA 58329 || | ||||||||||| ||||||||| || | | || | ||| | || ||| Sbjct 1150899 ACGTCGAGTTTGTTGCTGACAGACTTCTGGTGGCTCTTGGTAATGAGAAATACTATAACG 1150840 Query 58330 CGAAAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCG 58389 || ||| || || || |||||| | ||||| || | || ||||| || || || | Sbjct 1150839 TGACAAACCCATTCGACTTTATGGAGAACATCTCTCTAGCCGGTAAGACTAATTTCTTTG 1150780 Query 58390 aaaaaaaaGTTAGCGAATATCAAAA 58414 | |||| |||| || ||||| || Sbjct 1150779 AGAAAAGAGTTTCTGATTATCAGAA 1150755 Score = 116 bits (128), Expect = 3e-21 Identities = 163/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||||||||| |||||||| || || || || ||||| | || || ||| | || Sbjct 634987 ATGCAAATTTTCGTTAAGACTCTAACCGGTAAGACTATCACTCTGGAAGTGGAATCTTCT 634928 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | |||| | ||||| | || ||||||||||| | || || ||||| Sbjct 634927 GATACCATCGACAACGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCCCCAGACCAA 634868 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | ||||| || ||||| ||||| || |||||| || ||| || ||||| ||| Sbjct 634867 CAGAGACTAATTTTTGCTGGTAAACAATTAGAAGACGGTAGAACTCTGTCTGATTACAAC 634808 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||| || ||||| ||||| || |||| | ||| | || || |||| Sbjct 634807 ATTCAGAAGGAATCTACTCTGCACTTGGTCTTGAGATTAAGAGGTGGTA 634759 Score = 114 bits (126), Expect = 1e-20 Identities = 165/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||||||||| |||||||| || || ||||| ||||| | || || || | ||| Sbjct 635443 ATGCAAATTTTCGTCAAGACTCTAACTGGTAAAACTATCACTTTAGAAGTCGAGTCTTCC 635384 Query 31253 GACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| | ||||| || ||| | |||||||||||| | || |||||||| Sbjct 635383 GACACCATCGACAACGTCAAGTCAAAGATTCA-GGACAAGGAAGGTATTCCACCCGACCA 635325 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||| | || || || ||||| || ||| ||||||| | || | ||||| || Sbjct 635324 ACAGAGACTGATTTTTGCTGGTAAGCAGCTGGAAGATGGCAGAACACTATCTGATTACAA 635265 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || || || ||||| ||||| || |||| || ||||| || || |||| Sbjct 635264 TATCCAGAAGGAATCTACTCTGCACTTGGTTCTAAGACTAAGAGGTGGTA 635215 Score = 105 bits (116), Expect = 6e-18 Identities = 163/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| |||||||| |||||| |||| || || || || ||| | || |||||| | || Sbjct 635671 ATGCAGATTTTCGTTAAGACTTTGACTGGTAAGACTATTACCTTGGAGGTTGAATCTTCT 635612 Query 31253 GACAGTGTCGA-AACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 || | |||| |||| | | || ||| | ||||||||||| | || || ||||| Sbjct 635611 GATACCATCGACAACGTTAAGTCAAAGA-TCCAAGACAAGGAAGGTATTCCTCCAGACCA 635553 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||| | | || || ||||| || || |||||||| || ||| || ||||| || Sbjct 635552 ACAGAGATTGATTTTTGCTGGAAAGCAACTGGAAGACGGTAGAACTTTGTCTGATTACAA 635493 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||| || || ||||| |||||||| |||| | ||| | || || |||| Sbjct 635492 CATCCAGAAGGAATCCACTCTTCACTTGGTCTTGAGATTAAGAGGTGGTA 635443 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| || || || || |||| || ||||| ||||| | || || ||| | || Sbjct 634531 ATGCAAATCTTTGTGAAAACCTTGACTGGTAAAACCATCACTTTGGAAGTGGAATCTTCT 634472 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | |||| | || ||| | ||| |||||||||||| | || || ||||| Sbjct 634471 GATACTATCGATAATGTTAAATCTAAAATTCAGGACAAGGAAGGTATTCCTCCTGACCAA 634412 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | | || || || || || || ||||||||| || ||| || ||||| ||| Sbjct 634411 CAGAGATTGATTTTTGCAGGTAAGCAATTGGAAGACGGTAGAACTCTGTCTGATTACAAC 634352 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 || || ||||| || ||||| || |||| | ||||| || || || Sbjct 634351 ATCCAGAAAGAGTCTACTCTGCACTTGGTTTTAAGACTAAGAGGTGG 634305 Score = 87.8 bits (96), Expect = 2e-12 Identities = 154/222 (69%), Gaps = 2/222 (1%) Strand=Plus/Plus Query 31201 TTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGT 31260 ||| || |||||| |||| || || || ||||| | || || ||| | || || | | Sbjct 528043 TTTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAGGTCGAATCCTCTGATACCAT 528102 Query 31261 CGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTC 31319 || | ||||| || ||| | |||||||||||| | || || ||||| || | Sbjct 528103 TGACAACGTCAAGTCAAAGATTCA-GGACAAGGAAGGTATCCCACCTGACCAACAAAGAT 528161 Query 31320 TAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAA 31379 |||| |||||||| || || |||||||| || || || || || ||||| |||| Sbjct 528162 TAATCTTCGCTGGTAAGCAATTGGAAGATGGTAGAACGTTGTCTGACTACAACATCCAAA 528221 Query 31380 AAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 | ||||| ||| | || |||| || ||| |||| || |||| Sbjct 528222 AGGAATCTACTTTGCACTTGGTTCTAAGATTGAGAGGTGGTA 528263 >seq3 Length=1464093 Score = 123 bits (136), Expect = 2e-23 Identities = 561/878 (64%), Gaps = 10/878 (1%) Strand=Plus/Minus Query 23065 GTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTGCCCAAATTGCTCTGGTT 23124 ||| || || ||||| ||||| |||| | | || ||| || | || | ||||| Sbjct 648319 GTATTCCACGATTTCACAACATAAATTGGAAGATTTAATCACACCAAGGTTCTTTTGGTT 648260 Query 23125 GCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGA 23184 || ||| ||| || | |||||| ||||||||| | || || || || || || | Sbjct 648259 ACTCTTTTCATTACATGCATCCTTATAGAGCATGAAAGGTGTACCAGTTTCAGTTTGTGC 648200 Query 23185 CTCGATGATCGCTCGCCACATAGTCTGAGCGTGAACACGTCGCACGTACCT--GCCTTCT 23242 || | || || ||||| | ||||| || ||| | |||| ||||||| Sbjct 648199 TTCTAAAATGGCATACCACAACTTTTGAGCTCTAATT-GTCTTTC-TACCACGGCCTTCT 648142 Query 23243 TCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTA-ACAGTCGGCCAGGCCGGG 23301 | || || || |||||| |||||||| |||| || ||| || || | || || Sbjct 648141 TGTTCATAACGTTCGTACAATTTTTCAAATTCTTCACCATATACA-TCTGCTAAACCAGG 648083 Query 23302 CGATTGCATCGGACACATGAGACTCCACA-TTGAGTCATTTTCAACGCGTCTCATAAAAA 23360 | || | ||| | | || |||| || | || ||||| || ||| |||| || | Sbjct 648082 AGCTTCACTTGGAGAGAAAAGTGTCCATTCTTCATTC-TTTTCGACACGTTTCATGAACA 648024 Query 23361 GATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGT 23420 ||| || ||||||| || ||| | || | || || | || ||||| || || Sbjct 648023 AATCAGGAATCCATAATGCTGGGAATAAATCTCTTGCACGAATTTCTTCTTTACCATGGT 647964 Query 23421 TCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAA 23480 ||||| | | ||| | || || || | || | ||||| || || | |||| ||| | Sbjct 647963 TCTTTCTGATATCAATGAAATCAAAGATATCTGAGTGCCATGGTTCCAAATAAAGGGCGA 647904 Query 23481 ACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTC 23540 | || || |||||||||||||| || ||||| || ||||| || |||||||| | || | Sbjct 647903 ATGCTCCAGGTCTCTTATTGCCACCTTGATCCACATAACGTGCAGTGTTGTTAAAAACAC 647844 Query 23541 TTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTCGAACCTTTTG 23600 | ||| || | | ||| ||||| | || || || | ||||| | | Sbjct 647843 GAACCATTGGGATTAAACCATTGGAAGTACCATTAGTACCTGCAATGTAAGAACCCGTAG 647784 Query 23601 CTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCATCGCGCATT 23660 |||| ||| |||| || || || || || || | | || || ||||| || |||| Sbjct 647783 AACGAATGTTATGAATATGCAACCCAATACCACCAGCAGTCTTGGAAATCATGGCACATT 647724 Query 23661 GTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACG 23720 ||| | | || || || || || ||| || ||||| |||| || | |||||| | Sbjct 647723 CTTTTAATGAATCATAAATACCTTCAATGGAATCGTCTTTCATCGCCACAAGGAAACAAG 647664 Query 23721 AAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGT 23780 | | |||||| | | || ||| | || ||| || || || || || | || | Sbjct 647663 ATGCCATTTGTGGATGTGGAGTACCTGCATTGAAAAGAGTTGGAGAAGCATGGATGAAAT 647604 Query 23781 ATC-CATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATA 23839 | | || | ||||| | |||||| || ||||| || | | || || || || || ||| Sbjct 647603 ACCTCAAT-GACATCAAATTGTAAGTTTCGATCGCAGATTTGATATCTTCACCATGAATA 647545 Query 23840 CCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGACCGTGACGCCGTTAATTTTG 23899 || | || | ||| || | | ||| |||||||| | || | || || || | Sbjct 647544 CCCAAACTAACTCTCATTATTAGATGTTGTGGTCTCTCAGCAGTCAACCCATTGATCCTT 647485 Query 23900 AACAGATATGAACGTTGCATCGTTTTAAATCCAAAATA 23937 |||| || ||||||| | || || || || ||||| Sbjct 647484 AACAAGTAAGAACGTTCTAAAGTCTTGAAACCGAAATA 647447 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| ||||| || |||||| |||| || || || || ||| | || |||||| | || Sbjct 318229 ATGCAGATTTTTGTCAAGACTTTGACGGGTAAGACCATTACCCTAGAGGTTGAATCTTCT 318288 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | |||| | ||||| | || |||||||||||| | || || ||||| Sbjct 318289 GACACTATCGACAATGTCAAGTCCAAGATTCAGGACAAGGAAGGTATCCCACCTGACCAA 318348 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || | | || || ||||| || || |||||||| || || || ||| || ||| Sbjct 318349 CAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACCTTGTCCGACTACAAC 318408 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420 || ||||| ||||| || | || |||| |||||| |||| || ||| Sbjct 318409 ATCCAAAAGGAATCCACCTTGCACTTGGTCCTTAGATTGAGAGGTGGT 318456 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445766360995440