Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20rouxii_20[genbank_20GCA_5F000026365.1_202009-06- 05] 7 sequences; 9,764,635 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq7 206 2e-48 seq3 203 3e-47 seq6 129 5e-25 >seq7 Length=1865392 Score = 206 bits (228), Expect = 2e-48 Identities = 408/598 (68%), Gaps = 12/598 (2%) Strand=Plus/Plus Query 11626 TAAACACGCAAAATCACAATGTAAACCTTCGTCTCTACTTATTAGTTCATTAGAAAATGT 11685 || ||| |||||||| || |||||||||||||||| || | ||||||||| || || Sbjct 1151042 TAGACAAGCAAAATCTGTGTGCAAACCTTCGTCTCTACAGATCAATTCATTAGAGAAAGT 1151101 Query 11686 TAATCCGGGCATCAATCCTCGtttttttATCCAAAATATAGCAGCAAATGAACCAGAAAA 11745 ||| || ||||| | || || || | |||||| || ||||||||||| || || || Sbjct 1151102 TAAACCTGGCATTAGACCCTTCTTCTTCAACCAAAAGATGGCAGCAAATGATCCCGAGAA 1151161 Query 11746 GAATATTCCCTCCACAGCTGCAAATGCTACTACTCTTTCTCCATATA---CCTTGTTG-C 11801 ||| | || ||||| || ||||| || |||| |||||| |||| | | | | | | Sbjct 1151162 GAAAACACCTTCCACTGCGGCAAAGGCCACTAATCTTTCAGCATAAAGGGCAGTATCGTC 1151221 Query 11802 TAGATATCCATTTTCTGGCCCAATCAGCTTTCTTTTTTACGCATTCCATTGTTTCTATAG 11861 | || ||||| | | ||||| || || || | || | | || |||| || | Sbjct 1151222 TTGA-ATCCACCTAATTGCCCATTCTGCCTTTTCCTTGATTGGTGGAATGTTTTCAATTG 1151280 Query 11862 CGTTAAATAAATGCATTT--TTTCTATATTATCTCTTACATATGTATCTATTAATAAACT 11919 | ||||||||| ||| |||| ||||||| || ||||| || |||| Sbjct 1151281 CATTAAATAAAA--ATTCACTTTCCTCGGTATCTCTACTGTAGGTATCAATCAATAGCGA 1151338 Query 11920 ATACATTTCTGAATGAATATTTTCCATAGCTATTTGAAATCCATAGAAACATCGTGCCTC 11979 ||| |||| ||||| ||||||||||| || || || || ||||| || ||||| Sbjct 1151339 ATAAGTTTCAGAATGGATATTTTCCATCATAATCTGGAACCCGTAGAAGCACTTAGCCTC 1151398 Query 11980 TGAACACTGTACATCCACATAAAATCTTTCCGCTAAATTCTCATTTACAATACCATCACT 12039 | || || || || | || | ||| | ||||||||||| ||||||||||| Sbjct 1151399 CGGTATTTGGACCTCAGCAGAGAAATTCTCCACCAAATTCTCATTAACAATACCATCGGA 1151458 Query 12040 AGATGCAAAAAATGCTAGTATATGTTTTATAAAGTATTTTTCGTCTTTAGTTA---ATTT 12096 | |||||| || ||||| | | || || ||| |||| ||| | | | || Sbjct 1151459 TGCTGCAAAGAACGCTAGGACTCTTGAAATGAAATATCTTTCACCTTCACTCATCTTATT 1151518 Query 12097 ATCCCAATCATCTAAATCTTTTGATAAATCTACTTCTTCAACGGTCCAAAAACTTGCCAC 12156 || ||||||||| ||||| || |||||||| | ||||||| | |||||||| ||| | Sbjct 1151519 ATTCCAATCATCCAAATCCTTCGATAAATCGATTTCTTCAGCTGTCCAAAATGATGCTTC 1151578 Query 12157 TGATTGTTTATACATTTTCCAGATATCATGATACTTAATAGGGAAAATAACGAACCTA 12214 || | || || || ||| || |||||||| ||||| ||||||| ||| || ||| Sbjct 1151579 TGCTCTCTTGTAAGCTTGCCAAATTTCATGATATTTAATGGGGAAAAGAACAAATCTA 1151636 >seq3 Length=1464093 Score = 203 bits (224), Expect = 3e-47 Identities = 417/620 (67%), Gaps = 0/620 (0%) Strand=Plus/Minus Query 37930 TATAATTTGTTAAAATCATTCCCCCATACATCGCATAATCCTGGACATTCGCATGGACAC 37989 || ||||| | ||| || | || ||||||| ||| || ||| ||| | |||| | Sbjct 648126 TACAATTTTTCAAATTCTTCACCATATACATCTGCTAAACCAGGAGCTTCACTTGGAGAG 648067 Query 37990 ATTAGAGACCATTCTTCATCTTTTTCTACGCGTTCCATAAATAAATCAGGTACCCATAAT 38049 | || | ||||||||||| ||||| || |||| ||| || |||||||| | ||||||| Sbjct 648066 AAAAGTGTCCATTCTTCATTCTTTTCGACACGTTTCATGAACAAATCAGGAATCCATAAT 648007 Query 38050 GCAGTAAATAAATCTTTGGTTCTATATTCTTCGTTCCCTACATTCTTTCTTAAGCTTAGA 38109 || | ||||||||| | | | | |||||| || || |||||||| | | Sbjct 648006 GCTGGGAATAAATCTCTTGCACGAATTTCTTCTTTACCATGGTTCTTTCTGATATCAATG 647947 Query 38110 AAATCGAATATATCAGCGTGCCATGGTTCTATATAAATCGACATTGCTCCTGGTCTTTTA 38169 ||||| || ||||| | |||||||||||| | ||||| | | |||||| ||||| ||| Sbjct 647946 AAATCAAAGATATCTGAGTGCCATGGTTCCAAATAAAGGGCGAATGCTCCAGGTCTCTTA 647887 Query 38170 TCACCTCCCTGATTAATATATCTAACTGTGTTATTATATATTCTTAACATAGGTACTATA 38229 | || || |||| | ||| | | ||||| ||| | | | | ||| || | || | Sbjct 647886 TTGCCACCTTGATCCACATAACGTGCAGTGTTGTTAAAAACACGAACCATTGGGATTAAA 647827 Query 38230 CCATTAGATTTGCCGTTTATACCGGATATATAAGTACCCTTAGCTCGTATATTACTTATC 38289 ||||| || | || || |||| | || |||| |||| ||| || || ||| || Sbjct 647826 CCATTGGAAGTACCATTAGTACCTGCAATGTAAGAACCCGTAGAACGAATGTTATGAATA 647767 Query 38290 GACAATCCTATTCCACCTGCATGTTTTGATATTAAAGCGCATTGTTTTAACGTATCAAAT 38349 ||| || || ||||| ||| || || || | || |||| |||||| | |||| | Sbjct 647766 TGCAACCCAATACCACCAGCAGTCTTGGAAATCATGGCACATTCTTTTAATGAATCATAA 647707 Query 38350 ATACCTTCTATACTGTCATCCTTTATTGGTAGTATAAAACAACTAGACATTTGAGGCAAT 38409 |||||||| || || || || || | | | |||||| | |||||| || | Sbjct 647706 ATACCTTCAATGGAATCGTCTTTCATCGCCACAAGGAAACAAGATGCCATTTGTGGATGT 647647 Query 38410 GGAGTTCCGGCGTTAAATAATGTAGGAGATGCATGTATGAACCATTTTTCCGACAAATAA 38469 ||||| || || || || | || ||||| ||||| ||||| | | |||| || Sbjct 647646 GGAGTACCTGCATTGAAAAGAGTTGGAGAAGCATGGATGAAATACCTCAATGACATCAAA 647587 Query 38470 TTATATGTTTCTATTACATCATCTATATCACCGCCGTGAATACCTAGAGATACCCTCATT 38529 || || ||||| || || | ||||| | || |||||||| | | || |||||| Sbjct 647586 TTGTAAGTTTCGATCGCAGATTTGATATCTTCACCATGAATACCCAAACTAACTCTCATT 647527 Query 38530 AGCATATGTTGTGGTCTTTC 38549 | | |||||||||||| || Sbjct 647526 ATTAGATGTTGTGGTCTCTC 647507 Score = 141 bits (156), Expect = 9e-29 Identities = 504/779 (65%), Gaps = 9/779 (1%) Strand=Plus/Minus Query 36796 GTGAATTTTATAGGATTTGATGCCGATTTTGTTCTCATATAATACATTCCAGTTTTTAGC 36855 ||||||| |||| || || | || |||||||| || ||||| ||||| || || Sbjct 649281 GTGAATTGAATAGCTGCAGAAGCGGCTTGTGTTCTCAAGTAGTACATACCAGTCTTGAGA 649222 Query 36856 CCCAATCTCCATCCGTAAAAATGCATACTGGTCAGTTTTGCGTATGTAGGATTATCTATA 36915 ||| |||| ||||| || |||||||| || | ||| | ||| || | || Sbjct 649221 CCCTTCTTCCAACCGTAGAAGTGCATACTTGTTAATTTACCCATTGTGGGGGCACGCATG 649162 Query 36916 TATATTGTCATTGATTGACTTTGATCTATAAACGCACCTCTGTCGGCTGCCATTTCTAAA 36975 | || ||| || ||| |||||| || ||| || | | || || ||||| |||| | Sbjct 649161 TGGATATTCAAGGAATGAGATTGATCAATGAACACAGCACGATCAGCAGCCATGTCTAGA 649102 Query 36976 ATACATTTTTGAGATATCTCCCAAACCGTTTTATATATTTGTTTTATATTATCTGGTAAA 37035 | | | ||||||| || ||||| ||||| || || | | ||| || | | ||| | | Sbjct 649101 ACATGTCTTTGAGAAATTTCCCACACCGTCTTGTACAAATCTTTGATTTCTTGTGGAATA 649042 Query 37036 TCTA-AATGTT--GAATAGAACCATTAT--GTAACACAATTGTATTCTTTATGTCATTAT 37090 | | |||||| |||| |||||||||| |||| | |||| | || || | || Sbjct 649041 TTTGGAATGTTCTGAATGGAACCATTATCAGTAATG-ATTTGTTGT-TTCATACTTTCAT 648984 Query 37091 TCCACATATTTCTACTTATTAGTTCTCTCAATAGGTGTGGATTTACAACCTGAAAATCTC 37150 ||| ||| | | || | || | || | || |||||| |||| || || || | Sbjct 648983 CCCAAATACCTAAATCTACCAAATCCTTTAACAAGTATGGATTAACAATTTGGAATTCAC 648924 Query 37151 CAGATAATACTCTTCTTGTATATATATTGCTAGTATATGGTTCAATGGACTCATTATTAC 37210 ||||||| || | | | || || || || || ||||| | | || || | || Sbjct 648923 CAGATAAAACACGACGAGAGTACATGTTAGATGTGTAAGGTTCGAAACATTCGTTGTAAC 648864 Query 37211 TTAATATTTGAGATGTAGATGCAGTAGGCATTGGTGCTATTAGAAGGCTATTTCTCAATC 37270 || ||||| ||||| || ||||| ||||| || || | || | ||||| | | Sbjct 648863 CCAAGATTTGTGATGTTGAAGCAGTGGGCATAGGGGCCACTAATAATGAGTTTCTTACAC 648804 Query 37271 CATGTGTATTAATTCTCTTTTTTAGTTCATTCCAATCCCATAAATCTGTTGGGTTCTTTA 37330 ||||| ||||| | | | | | | | |||||||||||| |||| || ||||| Sbjct 648803 CATGTTCTTTAATGCCTTGTCTCAATGGTTCCCAATCCCATAATTCTGAAGGATTCTTCT 648744 Query 37331 ACCACATATCATATTGTAGAATACCTTTACTCGCTGGAGAATCGTTATATGTCTCATAAG 37390 ||| | |||| |||||| || ||||| || ||| | | ||| || ||||| Sbjct 648743 CCCAAAGATCAAATTGTAAAAGACCTTGGGAGATAGGGGAACCTTCATAGGTAGAATAAG 648684 Query 37391 GTCCGTAAATTTTAGCTAGTTCGCAACTAGATTCTAGTGCGGCATAATATATTGTTTCGA 37450 |||| ||| || || | ||| ||| ||| | || | | || || ||||| | Sbjct 648683 TACCGTGAATCTTGGCCAATTCACAAGATTGTTCCAAGGCACCGTGGTAAATAGTTTCAA 648624 Query 37451 AAATTTGTATATTTAATATTTTTGCTTCTTCGCTATCGAAT-GCATAGCCCAATAATATA 37509 |||||||| || ||||||||||| || || ||| ||| | | ||| | ||| Sbjct 648623 AAATTTGTTGGTTCAATATTTTTGCCTCAGGAGATTCAAATGGCAGA-CGCAACATCATA 648565 Query 37510 AACACATCAGCCAAACCCTGAACACCGATACCTATGGGTCTATGTTTCTTATTAGATCT 37568 || || || || || | |||||| | | || ||||||||| || |||| ||||| Sbjct 648564 AAAGTGTCTGCTAACCCATTAACACCAAGTGCAATAGGTCTATGTCTCATATTGGATCT 648506 >seq6 Length=1554288 Score = 129 bits (142), Expect = 5e-25 Identities = 359/545 (66%), Gaps = 12/545 (2%) Strand=Plus/Plus Query 37699 GATCCTAGATTACATACAGCAACTTCATCTTCGTTACTAAATTGTATAATCTCTGTACAG 37758 ||| | ||||| || || ||| ||||| | | |||| ||| || ||| || || Sbjct 894130 GATGCCAGATTGCACACTGCAGTCTCATCCTTGGAACTATATTCTACAATTTCACAGCAT 894189 Query 37759 AGATTACTCGATCTAATTGTTCCCAAATTGCTTTGATTGGATTTTTTATTACAAGAATCT 37818 | |||| || |||| ||||||| ||| |||| || |||||| |||||||||||| Sbjct 894190 AAATTAGAAGACTTAATGGTTCCCAGATTCTTTTGGTTCGATTTTAAATTACAAGAATCC 894249 Query 37819 TTATATAGTATATACGGCGTTCCTTGTTCTATTTGAGCCTCGATAAT---AGATTTCCAT 37875 || || || ||| | || ||| ||| | |||||| | | ||| ||| ||| Sbjct 894250 TTGTAAAGCATAAAAGGACCGCCTGTTTCCACTTGAGCTTGCAAAATCTCAGA---CCAC 894306 Query 37876 AAACTTCTTGCTTTAACGATCGCTTTAAttttt--ttCTTTGT-TTCGTATTCTATATAT 37932 | || ||||||||| || ||| ||| | | || |||||||| | |||| Sbjct 894307 AGCTTTTGGGCTTTAACG--CG-TTTCATTGGCAATGCAGTGGCTTCGTATTGTTCATAT 894363 Query 37933 AATTTGTTAAAATCATTCCCCCATACATCGCATAATCCTGGACATTCGCATGGACACATT 37992 | | | ||| || || || | ||||| | || || || ||| ||| | | Sbjct 894364 AGCTCTTCAAACTCCTTACCGTAGACATCACTTAGACCAGGCGCTTCATCTGGGCTGAAA 894423 Query 37993 AGAGACCATTCTTCATCTTTTTCTACGCGTTCCATAAATAAATCAGGTACCCATAATGCA 38052 |||||||| || ||| | ||| || | ||| || ||||| || | ||||| |||| Sbjct 894424 AGAGACCACTCACCATTGCACTGTACACGCTTCATGAACAAATCTGGAATCCATAGTGCA 894483 Query 38053 GTAAATAAATCTTTGGTTCTATATTCTTCGTTCCCTACATTCTTTCTTAAGCTTAGAAAA 38112 |||||||||| | | ||| |||| || || || ||||||||||| || ||| Sbjct 894484 AAAAATAAATCTCTAGCTCTTAATTCATCCTTACCATGGTTCTTTCTTAACTGCAGGAAA 894543 Query 38113 TCGAATATATCAGCGTGCCATGGTTCTATATAAATCGACATTGCTCCTGGTCTTTTATCA 38172 || || | ||| | ||||| ||||| | ||| || | ||| || || | || | Sbjct 894544 TCAAAAACATCTGAATGCCAGGGTTCCAAATATATACAGTATGCACCCGGACGCTTGTTT 894603 Query 38173 CCTCCCTGATTAATATATCTAACTGTGTTATTATATATTCTTAACATAGGTACTATACCA 38232 |||||||| | | |||||| | || |||||| | | | || ||| || ||||||||| Sbjct 894604 CCTCCCTGGTCCACATATCTGGCAGTATTATTAAAAACACGTAGCATGGGAACTATACCA 894663 Query 38233 TTAGA 38237 ||||| Sbjct 894664 TTAGA 894668 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468524759004080