Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20rouxii_20[genbank_20GCA_5F000026365.1_202009-06- 05] 7 sequences; 9,764,635 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq7 116 3e-21 >seq7 Length=1865392 Score = 116 bits (128), Expect = 3e-21 Identities = 160/221 (72%), Gaps = 6/221 (3%) Strand=Plus/Plus Query 42892 AGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGT 42951 ||||||| ||||| || | ||| ||||| || | ||||||||| || | ||| | Sbjct 635226 AGTCTTAGAACCAAGTGCAGAGTAGATTCCTTCTGGATATTGTAATCAGATAGTGTTCTG 635285 Query 42952 TCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCT 43011 | || |||| || || || |||||||||| || |||||| |||| || | |||||| Sbjct 635286 CCATCTTCCAGCTGCTTACCAGCAAAAATCAGTCTCTGTTGGTCGGGTGGAATACCTTCC 635345 Query 43012 TTTTCGCTGATCAACTCT---TTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACC 43068 || || |||| | || | ||||| || | | |||||| || |||||| |||| Sbjct 635346 TTGTC-CTGA--ATCTTTGACTTGACGTTGTCGATGGTGTCGGAAGACTCGACTTCTAAA 635402 Query 43069 GTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 || |||||||| || |||||||| || || ||||||||||| Sbjct 635403 GTGATAGTTTTACCAGTTAGAGTCTTGACGAAAATTTGCAT 635443 Score = 87.8 bits (96), Expect = 1e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 42894 TCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTC 42953 ||| || ||||| || | ||| ||||| || | |||||||| |||| || | | Sbjct 634772 TCTCAAGACCAAGTGCAGAGTAGATTCCTTCTGAATGTTGTAATCAGACAGAGTTCTACC 634831 Query 42954 GTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTT 43013 ||| || |||||||| || |||||||| | || |||||| || | || | |||||| || Sbjct 634832 GTCTTCTAATTGTTTACCAGCAAAAATTAGTCTCTGTTGGTCTGGGGGAATACCTTCCTT 634891 Query 43014 TTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTAT 43073 || |||| ||||| || | | || || || || || || | || || Sbjct 634892 GTCTTGGATCTTGGACTTGACGTTGTCGATGGTATCAGAAGATTCCACTTCCAGAGTGAT 634951 Query 43074 AGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 ||| || ||||||||||| || || ||||||||||| Sbjct 634952 AGTCTTACCGGTTAGAGTCTTAACGAAAATTTGCAT 634987 Score = 86.0 bits (94), Expect = 5e-12 Identities = 152/219 (69%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 42892 AGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGT 42951 |||||||| ||||| || | ||| ||| || || | |||||||| |||| || | Sbjct 634314 AGTCTTAAAACCAAGTGCAGAGTAGACTCTTTCTGGATGTTGTAATCAGACAGAGTTCTA 634373 Query 42952 TCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCT 43011 |||| |||||||| || || ||||||||||||| |||||| || | || | |||||| Sbjct 634374 CCGTCTTCCAATTGCTTACCTGCAAAAATCAATCTCTGTTGGTCAGGAGGAATACCTTCC 634433 Query 43012 TTTTCGCTG-ATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGT 43070 || || ||| || ||| || | | | || || || || || || | || Sbjct 634434 TTGTC-CTGAATTTTAGATTTAACATTATCGATAGTATCAGAAGATTCCACTTCCAAAGT 634492 Query 43071 TATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 || ||||| || || | ||||||||||| |||||||| Sbjct 634493 GATGGTTTTACCAGTCAAGGTTTTCACAAAGATTTGCAT 634531 Score = 82.4 bits (90), Expect = 6e-11 Identities = 149/218 (68%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 42892 AGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGT 42951 ||||||| ||||| || | ||| ||||| || | |||||||| || || || | Sbjct 634998 AGTCTTAGAACCAAGTGAAGAGTAGATTCCTTCTGGATGTTGTAATCAGATAAAGTTCTG 635057 Query 42952 TCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCT 43011 | || || | ||| || || ||||||||||||| |||||| || | || | |||||| Sbjct 635058 CCATCCTCAAGTTGCTTACCTGCAAAAATCAATCTCTGTTGGTCTGGAGGAATGCCTTCT 635117 Query 43012 TTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTT 43071 || || |||| |||||| || | | || || || || || || | || Sbjct 635118 TTGTCCTGGATCTTAGATTTGACGTTGTCGATAGTATCAGAAGATTCCACTTCCAAAGTG 635177 Query 43072 ATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 || || || ||||||||||| || || ||||| ||||| Sbjct 635178 ATGGTCTTACCGGTTAGAGTCTTAACGAAAATCTGCAT 635215 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381369567464406