Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20rouxii_20[genbank_20GCA_5F000026365.1_202009-06- 05] 7 sequences; 9,764,635 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq7 113 4e-20 seq3 86.0 5e-12 >seq7 Length=1865392 Score = 113 bits (124), Expect = 4e-20 Identities = 154/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 18827 CTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCG 18886 |||| |||| ||||| ||||| ||||| || ||||||||||| | | |||| || | Sbjct 635229 CTTAGAACCAAGTGCAGAGTAGATTCCTTCTGGATATTGTAATCAGATAGTGTTCTGCCA 635288 Query 18887 TCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTG 18946 || |||||||| ||||| ||| |||| |||||||| || || || | || || ||| Sbjct 635289 TCTTCCAGCTGCTTACCAGCAAAAATCAGTCTCTGTTGGTCGGGTGGAATACCTTCCTTG 635348 Query 18947 TCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATG 19006 || ||| || || || | | ||| || ||| || ||| ||| | || || Sbjct 635349 TCCTGAATCTTTGACTTGACGTTGTCGATGGTGTCGGAAGACTCGACTTCTAAAGTGATA 635408 Query 19007 GTTTTACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041 |||||||| |||| ||| ||||| ||||||||||| Sbjct 635409 GTTTTACCAGTTAGAGTCTTGACGAAAATTTGCAT 635443 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 18814 TCCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGC 18873 ||| |||| | ||||| |||| ||||| |||||||| || || || |||||||| | Sbjct 634304 TCCACCTCTTAGTCTTAAAACCAAGTGCAGAGTAGACTCTTTCTGGATGTTGTAATCAGA 634363 Query 18874 CATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGG 18933 || ||| | |||| |||| || ||||| ||| |||| | |||||| || || || Sbjct 634364 CAGAGTTCTACCGTCTTCCAATTGCTTACCTGCAAAAATCAATCTCTGTTGGTCAGGAGG 634423 Query 18934 CACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGT 18993 | || || ||||| |||||| ||| || | ||| |||||| || ||| Sbjct 634424 AATACCTTCCTTGTCCTGAATTTTAGATTTAACATTATCGATAGTATCAGAAGATTCCAC 634483 Query 18994 TTCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041 ||| | || ||||||||||| || || ||||| ||||| |||||||| Sbjct 634484 TTCCAAAGTGATGGTTTTACCAGTCAAGGTTTTCACAAAGATTTGCAT 634531 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 18815 CCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCC 18874 || |||| || || || |||| ||||| ||||| ||||| ||||| |||||||| | | Sbjct 634761 CCACCTCTTAATCTCAAGACCAAGTGCAGAGTAGATTCCTTCTGAATGTTGTAATCAGAC 634820 Query 18875 ATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGC 18934 | ||| | |||| || | |||||||| ||| |||| |||||||| || || ||| Sbjct 634821 AGAGTTCTACCGTCTTCTAATTGTTTACCAGCAAAAATTAGTCTCTGTTGGTCTGGGGGA 634880 Query 18935 ACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTT 18994 | || || ||||| || || || || | | ||| ||||| || ||| | Sbjct 634881 ATACCTTCCTTGTCTTGGATCTTGGACTTGACGTTGTCGATGGTATCAGAAGATTCCACT 634940 Query 18995 TCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041 || | || || || ||||| |||| ||| || || ||||||||||| Sbjct 634941 TCCAGAGTGATAGTCTTACCGGTTAGAGTCTTAACGAAAATTTGCAT 634987 >seq3 Length=1464093 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 18815 CCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCC 18874 || |||| ||| || | |||| |||||| || || |||||||| || ||||| || | | Sbjct 318455 CCACCTCTCAATCTAAGGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCGGAC 318396 Query 18875 ATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGC 18934 | ||| | | || |||| || ||||| ||| | || | ||| || || || || Sbjct 318395 AAGGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 318336 Query 18935 ACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTT 18994 | || || ||||| ||| || || || | | ||| ||| || || || Sbjct 318335 ATACCTTCCTTGTCCTGAATCTTGGACTTGACATTGTCGATAGTGTCAGAAGATTCAACC 318276 Query 18995 TCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041 || | ||||||||| ||||| || ||||| ||||||||||| ||||| Sbjct 318275 TCTAGGGTAATGGTCTTACCCGTCAAAGTCTTGACAAAAATCTGCAT 318229 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414572764631758