Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20rouxii_20[genbank_20GCA_5F000026365.1_202009-06- 05] 7 sequences; 9,764,635 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq7 170 2e-37 >seq7 Length=1865392 Score = 170 bits (188), Expect = 2e-37 Identities = 597/916 (65%), Gaps = 37/916 (4%) Strand=Plus/Plus Query 12842 TTTGACATAACAGACATTTTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTT 12901 |||||||| ||| || ||||| || ||||||||| ||||| || || || || Sbjct 1150737 TTTGACATGACACCAGCCTTCTGATAATCAGAAACTCTTTTCTCAAAGAAATTAGTCTTA 1150796 Query 12902 CCTTCTAACGAAATATTTTCCATAAAATCGAAAGGATTTTTCGAACAATAGTATTTTTTA 12961 || ||| || || || |||||||| ||||| || ||| || ||||||||| | | Sbjct 1150797 CCGGCTAGAGAGATGTTCTCCATAAAGTCGAATGGGTTTGTCACGTTATAGTATTTCTCA 1150856 Query 12962 CACCCTAATTCTAGTAACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATCA 13021 || | | | | | |||||||||||||||||| | ||| || ||||||| | Sbjct 1150857 TTACCAAGAGCCACCAGAAGTCTGTCAGCAACAAACTCGACGTATTGATTCATTAGCGCG 1150916 Query 13022 CAGTTCATTCCTATTAATTTTACAGGCATAGCTTCTGTTAAAAAGtttttttCTATATCA 13081 |||||| || | | || || | ||| ||| || | | || || || Sbjct 1150917 GCGTTCATGCCCAGCAGAGCCACGGGGAGAGCATCTTCAAAGTATCTCTTCTCAATTGAT 1150976 Query 13082 ACTGCTTCGATAACTATGTCTCTTATTACGTTCTCTAATGGAGGATTTGATAGATGCTTA 13141 || ||||| ||| || |||| || | ||| ||| ||| | | ||| Sbjct 1150977 ACAGCTTCAGTAATGAT---TCTTTCCACAATGTCT------GGACTTGGTCTGTTCTTC 1151027 Query 13142 AAC-------ATCATA--CATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGC 13192 || || ||| || |||||||| |||||| ||||| ||||||| || | Sbjct 1151028 AAATGGGCGAATAATAGACAAGCAAAATCTGTGTGCAAACCTTCGTCTCTACAGATCAAT 1151087 Query 13193 TCGTTTGAAAATGTTAGACCCGGCATAAG-CCCTCGTTTTTTAATCCAAAATATAGCAGC 13251 || || || || |||| ||| ||||| || |||| || || || |||||| || ||||| Sbjct 1151088 TCATTAGAGAAAGTTAAACCTGGCATTAGACCCTTCTTCTTCAA-CCAAAAGATGGCAGC 1151146 Query 13252 AAACGAACCCGaaaaaaaTATTCCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATA 13311 ||| || ||||| || || | ||||| ||||| ||||| || | || |||||| |||| Sbjct 1151147 AAATGATCCCGAGAAGAAAACACCTTCCACTGCGGCAAAGGCCACTAATCTTTCAGCATA 1151206 Query 13312 C---GTACTATTTTTACTCTCTATCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCA 13368 | | ||| | || | |||||| | | ||||| | ||| |||| || | Sbjct 1151207 AAGGGCAGTATCGT--CT-TGAATCCACCTAATTGCCCATTCTGCCTTTTCCTTGATTGG 1151263 Query 13369 GTTCATATTTTCTATTGCGTTAAATAAATAAtttttttCCTTACTGTCTAAAATATAAGT 13428 || ||||| ||||| ||||||||| | | |||||| | ||| | | || || Sbjct 1151264 TGGAATGTTTTCAATTGCATTAAATAAAAATTCACTTTCCTCGGTATCTCTACTGTAGGT 1151323 Query 13429 ATCTATCAATAAGCTATACATTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATA 13488 ||| ||||||| ||| |||| ||||| |||||||||||| || ||||| || || Sbjct 1151324 ATCAATCAATAGCGAATAAGTTTCAGAATGGATATTTTCCATCATAATCTGGAACCCGTA 1151383 Query 13489 AAAACATCTAGCCTCTGATACCTGAACTTC-GGAGTAAAATCTTTCTGCTAAGTTTTCGT 13547 || || ||||||| | || || || || | || |||| | || | || || || | Sbjct 1151384 GAAGCACTTAGCCTCCGGTATTTGGACCTCAGCAGAGAAAT-TCTCCACCAAATTCTCAT 1151442 Query 13548 TAACTATCCCGTCACTAGCAGCaaaaaaaGCAAGTATGTGCTT--AATAAAttttttttC 13605 |||| || || || || ||||| || || || | ||| ||| || | | |||| Sbjct 1151443 TAACAATACCATCGGATGCTGCAAAGAACGCTAGGA--CTCTTGAAATGAAATATCTTTC 1151500 Query 13606 GTTTTCTGACAACT--TTA-ACCAATCTGGAAAATCTTTTGATAAATCTACCTCCTCAAC 13662 ||| || || ||| |||||| ||||| || |||||||| | || ||| | Sbjct 1151501 ACCTTCACTCATCTTATTATTCCAATCATCCAAATCCTTCGATAAATCGATTTCTTCAGC 1151560 Query 13663 GGTCCAAAAAGAAGCAACAGCCTTCTTATACATCAT-CCATATATCCTTATAAACAATGG 13721 |||||||| || || | || |||| || | | | ||| || || | ||| ||||| Sbjct 1151561 TGTCCAAAATGATGCTTCTGCTCTCTTGTA-AGCTTGCCAAATTTCATGATATTTAATGG 1151619 Query 13722 GAAACACAACGTATCT 13737 | || | ||| |||| Sbjct 1151620 GGAAAAGAACAAATCT 1151635 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430982363231814