Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20rouxii_20[genbank_20GCA_5F000026365.1_202009-06- 05] 7 sequences; 9,764,635 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq7 219 1e-51 seq3 143 6e-29 seq5 87.8 4e-12 >seq7 Length=1865392 Score = 219 bits (242), Expect = 1e-51 Identities = 501/744 (67%), Gaps = 14/744 (2%) Strand=Plus/Minus Query 268856 CTTGCGTTTTTTGCAGTTAGTGATGGTATCGTTAACGAAAATCTAGTAGAGAAGTTCTGT 268915 || ||||| ||||||| |||||||| ||||| || ||| | || ||||| |||| | Sbjct 1151476 CTAGCGTTCTTTGCAGCATCCGATGGTATTGTTAATGAGAATTTGGTGGAGAATTTCTCT 1151417 Query 268916 CAAGAGGTACAGATTCCTGAAGCCAGATGTTTTTACGGATTCCAGATAGCTATAGAAAAT 268975 ||||| || || || || || | || || ||||| |||||||| || |||||| Sbjct 1151416 GCTGAGGTCCAAATACCGGAGGCTAAGTGCTTCTACGGGTTCCAGATTATGATGGAAAAT 1151357 Query 268976 ATTCATTCAGAGATGTACAGTCTATTAATAGATACTTATA-TAGATGATAACAACGAAAA 269034 || ||||| || | || ||||| || ||||| || | |||| |||| | | |||| Sbjct 1151356 ATCCATTCTGAAACTTATTCGCTATTGATTGATACCTACAGTAGA-GATACCGAGGAAAG 1151298 Query 269035 GAAAAGACTATTTTCTTCTAT-GAGAACTATGGACTGTGTGAGaaaaaaaTCTGAATGGG 269093 || ||||| | | || || ||| | || || |||| | ||||||| Sbjct 1151297 TGAATTTTTATTTAATGCAATTGAAAACATTCCACCAATCAAGGAAAAGG-CAGAATGGG 1151239 Query 269094 CTCTGAAATGGAT---AAACGATAGCGCGCCTTACGGAGAAAGGTTAGTTGCTTTTGCCG 269150 | | | ||||| | |||||| || | ||| | ||||| ||||| || ||||||| Sbjct 1151238 CAATTAGGTGGATTCAAGACGATACTGCCCTTTATGCTGAAAGATTAGTGGCCTTTGCCG 1151179 Query 269151 CTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGGTTGAAGAAAAGAG 269210 | || |||||| | ||||| ||||| || ||||| || ||||||||||||||||| | | Sbjct 1151178 CAGTGGAAGGTGTTTTCTTCTCGGGATCATTTGCTGCCATCTTTTGGTTGAAGAAGAAGG 1151119 Query 269211 GCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGACGAAGGTTTACACT 269270 | || |||||||| |||||||||||||| |||||||| | || ||||||||||| ||| Sbjct 1151118 GTCTAATGCCAGGTTTAACTTTCTCTAATGAATTGATCTGTAGAGACGAAGGTTTGCACA 1151059 Query 269271 GCGACTTCGCTTGTTTATTATTTACTAATTATCTTTCACACAAACCTTCTCAAGATAGAG 269330 || || |||||| ||||||| | ||| | ||| ||| || ||| | | Sbjct 1151058 CAGATTTTGCTTGTCTATTATTCGCCCATT---TGAAGAACAGACCAAGTCCAGACATTG 1151002 Query 269331 TATACGAAATTATAGATTCAGCTGTTTCTGTAGA-AACAGA-ATTTCTAACGGAAGCTCT 269388 | | ||| || | |||||| || | || || ||| | || || || ||||| Sbjct 1151001 TGGAAAGAATCATTACTGAAGCTGTATCAATTGAGAAGAGATACTTTGAA--GATGCTCT 1150944 Query 269389 ATCTATCGATCTTATCGGTATGAATAGCAAATCGATGATAGAATATATTAAGTTCGTATC 269448 | | | ||| | || ||||| | |||| |||| | |||| || | Sbjct 1150943 CCCCGTGGCTCTGCTGGGCATGAACGCCGCGCTAATGAATCAATACGTCGAGTTTGTTGC 1150884 Query 269449 TGATAGATTGCTGGTGTCTTTAGGGTTTAGTAAAAAATATAACGTTGAAAATCCGTTTAG 269508 ||| ||| | |||||| || | || | ||| | |||||||| ||| || || Sbjct 1150883 TGACAGACTTCTGGTGGCTCTTGGTAATGAGAAATACTATAACGTGACAAACCCATTCGA 1150824 Query 269509 TTTTATGGAGAATATATCATTAGAAGGTAAGGCTAATTTCTTCGAGAAGCGGGTAAGTAA 269568 ||||||||||| || || ||| |||||| |||||||||| ||||| | || | | Sbjct 1150823 CTTTATGGAGAACATCTCTCTAGCCGGTAAGACTAATTTCTTTGAGAAAAGAGTTTCTGA 1150764 Query 269569 CTATCAGAAAATGGGTGTAATGTC 269592 |||||||| ||||| ||||| Sbjct 1150763 TTATCAGAAGGCTGGTGTCATGTC 1150740 Score = 167 bits (184), Expect = 5e-36 Identities = 175/230 (76%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||||| || | || | || | |||||||| |||||||| || || ||| Sbjct 634758 ATACCACCTCTTAATCTCAAGACCAAGTGCAGAGTAGATTCCTTCTGAATGTTGTAATCA 634817 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || ||||||||||||||||||| |||||| |||||||||||||| |||||||| || || Sbjct 634818 GACAGAGTTCTACCGTCTTCTAATTGTTTACCAGCAAAAATTAGTCTCTGTTGGTCTGGG 634877 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || ||||| || || || ||||| | || || || || | |||||| || ||| Sbjct 634878 GGAATACCTTCCTTGTCTTGGATCTTGGACTTGACGTTGTCGATGGTATCAGAAGATTCC 634937 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || || || ||||||||||| || || || || || || || ||||| Sbjct 634938 ACTTCCAGAGTGATAGTCTTACCGGTTAGAGTCTTAACGAAAATTTGCAT 634987 Score = 163 bits (180), Expect = 7e-35 Identities = 174/230 (76%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || |||||||| || || || | || | |||||||| ||||| ||||| || ||| Sbjct 635214 ATACCACCTCTTAGTCTTAGAACCAAGTGCAGAGTAGATTCCTTCTGGATATTGTAATCA 635273 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 ||||| ||||| || ||||| || || || ||||||||||| || |||||||| || || Sbjct 635274 GATAGTGTTCTGCCATCTTCCAGCTGCTTACCAGCAAAAATCAGTCTCTGTTGGTCGGGT 635333 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || ||||| || ||||||||||||| || || || || | ||| ||| || || Sbjct 635334 GGAATACCTTCCTTGTCCTGAATCTTTGACTTGACGTTGTCGATGGTGTCGGAAGACTCG 635393 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || |||| || ||||| |||||||| || || || || || || ||||| Sbjct 635394 ACTTCTAAAGTGATAGTTTTACCAGTTAGAGTCTTGACGAAAATTTGCAT 635443 Score = 163 bits (180), Expect = 7e-35 Identities = 174/230 (76%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||||| || | || | || | || ||||| ||||| || || || ||| Sbjct 635442 ATACCACCTCTTAATCTCAAGACCAAGTGAAGAGTGGATTCCTTCTGGATGTTGTAATCA 635501 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || | ||||||||||||||| ||||| |||||||||||||| | |||||||| || ||| Sbjct 635502 GACAAAGTTCTACCGTCTTCCAGTTGCTTTCCAGCAAAAATCAATCTCTGTTGGTCTGGA 635561 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || ||||| || || || ||||||| || || || || | |||||| || ||| Sbjct 635562 GGAATACCTTCCTTGTCTTGGATCTTTGACTTAACGTTGTCGATGGTATCAGAAGATTCA 635621 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| | ||||||||||||||||| | || || || || |||||||| Sbjct 635622 ACCTCCAAGGTAATAGTCTTACCAGTCAAAGTCTTAACGAAAATCTGCAT 635671 Score = 159 bits (176), Expect = 8e-34 Identities = 172/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 104332 TCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGA 104391 ||| |||||||| || | || | || | ||||| |||||||| || || || ||||| Sbjct 634304 TCCACCTCTTAGTCTTAAAACCAAGTGCAGAGTAGACTCTTTCTGGATGTTGTAATCAGA 634363 Query 104392 TAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGG 104451 ||||||||||||||||| | ||| || || |||||||| | |||||||| |||||||| Sbjct 634364 CAGAGTTCTACCGTCTTCCAATTGCTTACCTGCAAAAATCAATCTCTGTTGGTCAGGAGG 634423 Query 104452 TATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTAC 104511 || ||||| || |||||||| || | ||| ||||| || | ||||| || ||| || Sbjct 634424 AATACCTTCCTTGTCCTGAATTTTAGATTTAACATTATCGATAGTATCAGAAGATTCCAC 634483 Query 104512 CTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || | || || || |||||||| | ||||| ||||| || ||||| Sbjct 634484 TTCCAAAGTGATGGTTTTACCAGTCAAGGTTTTCACAAAGATTTGCAT 634531 Score = 154 bits (170), Expect = 3e-32 Identities = 172/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||||| || || || || || | |||||||| ||||| || || || ||| Sbjct 634530 ATACCACCTCTTAATCTTAGAACCAGGTGCAGAGTAGATTCCTTCTGGATGTTGTAATCA 634589 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || || ||||| || || || ||||| || |||||||| ||||| || ||||| || ||| Sbjct 634590 GACAGGGTTCTGCCATCCTCAAGTTGCTTACCAGCAAAGATTAGTCTTTGTTGGTCTGGA 634649 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || || || |||||||||||||||| || || || || | ||| ||| || || Sbjct 634650 GGAATACCCTCCTTATCCTGAATCTTTGACTTGACGTTGTCGATGGTGTCGGAAGACTCG 634709 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || |||| || ||||| |||||||| || || || || || || ||||| Sbjct 634710 ACTTCTAAAGTGATAGTTTTACCAGTTAGAGTCTTGACGAAGATTTGCAT 634759 Score = 132 bits (146), Expect = 1e-25 Identities = 162/221 (73%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||| | || || || | || || |||||||| || || || || |||||| Sbjct 528264 ATACCACCTCTCAATCTTAGAACCAAGTGCAAAGTAGATTCCTTTTGGATGTTGTAGTCA 528205 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || | |||||||| ||||| | ||| || ||||| || |||| || ||||| ||||| Sbjct 528204 GACAACGTTCTACCATCTTCCAATTGCTTACCAGCGAAGATTAATCTTTGTTGGTCAGGT 528145 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || ||||| || ||||||||||||| || || || || | |||||| | ||| Sbjct 528144 GGGATACCTTCCTTGTCCTGAATCTTTGACTTGACGTTGTCAATGGTATCAGAGGATTCG 528085 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAA 104550 ||||| | || || ||||||||||| | || || ||||| Sbjct 528084 ACCTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAA 528044 >seq3 Length=1464093 Score = 143 bits (158), Expect = 6e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 104333 CCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGAT 104392 || ||||| | ||||| || | || || || ||||| || || || || ||||| || Sbjct 318455 CCACCTCTCAATCTAAGGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCGGAC 318396 Query 104393 AGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGT 104452 | |||||||| ||||| | ||| || |||||||| || | || ||||| ||||| || Sbjct 318395 AAGGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 318336 Query 104453 ATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACC 104512 || ||||| || ||||||||||| | || ||||| || | || || || ||| ||| Sbjct 318335 ATACCTTCCTTGTCCTGAATCTTGGACTTGACATTGTCGATAGTGTCAGAAGATTCAACC 318276 Query 104513 TCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| ||||| |||||||| || | || || ||||| |||||||| Sbjct 318275 TCTAGGGTAATGGTCTTACCCGTCAAAGTCTTGACAAAAATCTGCAT 318229 >seq5 Length=881646 Score = 87.8 bits (96), Expect = 4e-12 Identities = 99/133 (74%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 165134 GATCCTGTTTTACATATAGAGCTAAGAAGATGGGCAGATATGATGTTGATAGCACCCTTA 165193 ||||| || |||||| ||| ||| |||||||||||| || | | | ||||| || Sbjct 55808 GATCCGGTATTACATCATGAGTTAAAAAGATGGGCAGACATTTTCCTAGTCGCACCTCTA 55867 Query 165194 ACAGCAAACAGTTTAGCGAAGATAGCTAACGGTATCTGTAATAACTTGTTAACGTGTATA 165253 | ||||||| |||||| |||||||| ||||||||||| | || || ||||| ||| | Sbjct 55868 TCCGCAAACACTTTAGCTAAGATAGCGTACGGTATCTGTGACAATTTATTAACCTGTGTT 55927 Query 165254 GTTAGAGCGTGGA 165266 | |||| |||| Sbjct 55928 CTGAGAGATTGGA 55940 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151398296733956