Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20rouxii_20[genbank_20GCA_5F000026365.1_202009-06- 05] 7 sequences; 9,764,635 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq1 118 1e-21 seq4 87.8 2e-12 >seq1 Length=1114666 Score = 118 bits (130), Expect = 1e-21 Identities = 295/444 (66%), Gaps = 23/444 (5%) Strand=Plus/Plus Query 6808 AATTGTTCTTTTATAGCTTTTATATGATCTAAATAAATATGAGCATCTCCTAGCGTATGA 6867 ||||||||||| | ||| | || ||||| ||| |||||||| || || | ||||| Sbjct 943761 AATTGTTCTTTCAGAGCGTCAATGTGATCCTTATAGATATGAGCGTCACCCATGGTATGG 943820 Query 6868 ATAAATTCACCTGGTTTCATATCA-ACAGCTTGAGCAATTAAATATGTTAATAATGCATA 6926 ||||||||||| |||| |||||| ||| | || ||||| | | || || | || ||| Sbjct 943821 ATAAATTCACCAGGTTCCATATCGCACA-CATGTGCAATCATCTTGGTCAAAAGTGAATA 943879 Query 6927 AGAAGCTACATTAAAAGGTACACCTAATCCCATATCTGCTGATCTTTGATAACATTGACA 6986 || || | || || || || || || |||||||| || || || || | |||| Sbjct 943880 GGATGCAATGTTGAATGGAACTCCCAACCCCATATCACAGGACCTCTGGTACAGTAGACA 943939 Query 6987 AGATAAAATA------------TTGTCTA---TAGCATAAAATTGACACAATACATGACA 7031 || || || ||| | || | || ||||| | ||||| ||||| Sbjct 943940 TGACAATTTAGGCTTGCCCTCCTTGGGGAAACTAACGTAGAATTGTGAAAATACGTGACA 943999 Query 7032 TGGAGGTAAAACAGCC--TGATCT-ATATCAGATGGATTCCAAGCAGTCATTAAAATACG 7088 ||| ||||| ||| | || | ||| | ||| ||||| || |||| | ||| | Sbjct 944000 TGGTGGTAAT---GCCATTAATGGGAAATCTGGTGGGTTCCAGGCGCTCATGATAATTCT 944056 Query 7089 TCTATCATTTGGATTTGTTTTTAATTTTGTTATAATTATTTGTAATTGATCTATACCCTG 7148 ||| || | ||||| |||| ||||| || | | ||||| || || | || || Sbjct 944057 TCTGTCGTAGGGATTATTTTTCAATTTATGAATCACTTCGTGTAACTGGTCAAACCCTTG 944116 Query 7149 ACCTTCATAATTAGTATGACAATTTATATAATTAGCTCCAAAATGTCTCCATTGAAACCC 7208 || ||| | | | |||| || | || || || ||||| || |||||||| || || Sbjct 944117 TCCCGTATAGTCATCGTCACAAGTTCTGTATTTGGCACCAAAGTGCCTCCATTGGAAACC 944176 Query 7209 ATAAATAGGACCTAAATCACCTTC 7232 |||| |||||||||||||||||| Sbjct 944177 GTAAACAGGACCTAAATCACCTTC 944200 >seq4 Length=1496342 Score = 87.8 bits (96), Expect = 2e-12 Identities = 116/161 (72%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 19343 AGATCTTCTAAAATACCTGAAATAGGTGATAAGTTTGCTTCTTTTACTGCTCAAAAAGGC 19402 ||| || | || || || |||| |||||||| ||||| ||| | | |||||| || Sbjct 987790 AGAACTACCAAGATCCCACAAATCGGTGATAAATTTGCATCTCGTCACGGTCAAAAGGGT 987731 Query 19403 ACATGTGGTATGATTTATCGTCAAGAAGATATGCCTTTTACTAAAGATGGTATAGTGCCG 19462 || |||||| | ||| || |||||||||||| |||||| || ||||| || || Sbjct 987730 ACCATTGGTATTACCTATGGTAGAGAAGATATGCCATTTACTGCTGAAGGTATTGTACCT 987671 Query 19463 GATCTTATTATTAACCCACATGCTTTTCCAAGTCGAATGAC 19503 ||| | || || ||||| ||||| ||||| ||| ||||| Sbjct 987670 GATTTGATCATCAACCCTCATGCCATTCCATCTCGTATGAC 987630 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595871947861200